FFCP PHASE1:Hg19::chr3:167813172..167813183,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:167813172..167813183,- to FFCP PHASE1:Hg19::chr3:167813172..167813183,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27333 | |EntrezGene=27333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15448 | |HGNC=15448 | ||
|TSSclassifier=strong | |||
|UniProt=F8W785 | |UniProt=F8W785 | ||
|association_with_transcript=-40bp_to_ENST00000309027_5end | |||
|cluster_id=chr3:167813172..167813183,- | |||
|description=CAGE_peak_10_at_GOLIM4_5end | |||
|id=chr3:167813172..167813183,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.45e-07;4!UBERON:0007284;1.45e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.53e-14!57;UBERON:0005068!9.53e-14!57;UBERON:0006241!9.53e-14!57;UBERON:0007135!9.53e-14!57;UBERON:0002780!1.33e-13!41;UBERON:0001890!1.33e-13!41;UBERON:0006240!1.33e-13!41;UBERON:0003080!8.05e-13!42;UBERON:0001893!1.67e-12!34;UBERON:0002020!2.07e-12!34;UBERON:0003528!2.07e-12!34;UBERON:0002791!4.98e-12!33;UBERON:0001869!1.78e-11!32;UBERON:0000955!4.11e-11!69;UBERON:0006238!4.11e-11!69;UBERON:0001017!6.49e-11!82;UBERON:0002616!9.33e-11!59;UBERON:0002619!3.52e-10!22;UBERON:0003075!4.33e-10!86;UBERON:0007284!4.33e-10!86;UBERON:0005743!4.83e-10!86;UBERON:0000073!1.09e-09!94;UBERON:0001016!1.09e-09!94;UBERON:0007023!1.53e-09!115;UBERON:0000956!1.99e-09!25;UBERON:0000203!1.99e-09!25;UBERON:0001950!4.63e-09!20;UBERON:0002346!5.93e-09!90;UBERON:0000025!1.20e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.51e-14;34!UBERON:0002780;7.33e-14;41!UBERON:0001890;7.33e-14;41!UBERON:0003528;1.21e-13;34!UBERON:0002020;1.21e-13;34!UBERON:0002791;1.59e-13;32!UBERON:0001869;3.13e-13;32!UBERON:0002619;1.62e-12;22!UBERON:0000073;1.59e-11;53!UBERON:0002616;1.59e-11;53!UBERON:0000956;1.21e-10;25!UBERON:0000203;1.21e-10;25!UBERON:0001950;2.81e-10;20!UBERON:0000125;2.10e-08;9!UBERON:0002308;2.10e-08;9!UBERON:0001017;4.14e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.93e-21,56;UBERON:0005068,2.93e-21,56;UBERON:0006241,2.93e-21,56;UBERON:0007135,2.93e-21,56;UBERON:0000073,2.69e-19,53;UBERON:0002616,2.69e-19,53;UBERON:0003075,1.33e-18,82;UBERON:0007284,1.33e-18,82;UBERON:0002780,8.57e-18,41;UBERON:0001890,8.57e-18,41;UBERON:0003080,8.57e-18,41;UBERON:0006240,8.57e-18,41;UBERON:0002346,2.93e-17,86;UBERON:0001893,6.99e-17,34;UBERON:0003528,1.05e-16,34;UBERON:0002020,1.05e-16,34;UBERON:0000955,1.81e-15,68;UBERON:0006238,1.81e-15,68;UBERON:0001017,4.24e-15,81;UBERON:0002791,1.24e-14,32;UBERON:0001869,1.33e-14,32;UBERON:0010371,1.58e-13,104;UBERON:0010314,3.41e-13,132;UBERON:0001016,1.05e-12,89;UBERON:0002619,3.70e-12,22;UBERON:0007023,7.94e-12,114;UBERON:0000025,2.01e-11,192;UBERON:0003056,5.32e-11,61;UBERON:0000956,2.45e-10,25;UBERON:0000203,2.45e-10,25;UBERON:0001950,9.30e-10,20;UBERON:0004111,5.21e-09,240;UBERON:0000125,2.05e-08,9;UBERON:0002308,2.05e-08,9;UBERON:0004121,1.73e-07,171;UBERON:0000924,1.73e-07,171;UBERON:0006601,1.73e-07,171 | |||
|phase1_expression=0.363356758541113,0.428201047781966,1.69145284915165,0,0.446961094427288,0.872338524100369,0,0,0,0.491467873003018,0,0.218441372130172,0,0.37129905888014,0,0,0,0,0,0,0,0,0.286235987131057,0,0.87879847716362,0.0764134057479513,0.410502947249729,0,0.393364276848904,0,0.464448369948228,0,0.30120591877825,0,0.542270404062111,0.710846162437108,0,0.553995408531877,0.802177789880567,0.434021741431704,0.895661896959697,0.647787332037959,0.77272670290256,0.145398238779565,0,0,0,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0,0.65156653411535,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0,0,0.670700859703636,0.511450247374121,0.722878304769133,0,0.579386075843295,3.1811437882044,1.45990461090791,0.472674085820339,0,0.351339142772504,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0.476981248610684,0,0,0.198762407366705,0,0.347140501607594,0,0.838998872419812,0.825354125820202,0.835979866147242,0.258416759169329,0.71153252537342,1.00416183829401,0,0,0,0.367663080345869,0.81014194788176,0.357198913136319,0,0.788280363383256,3.06633274931766,0,0.366403487860815,0,0,0,1.49091585508596,0.25326102332916,0.264818361626438,2.29469296599051,0.709336764396714,0,0,0,0.622422070799533,1.0776853765575,0.326923806226917,0,0.576175924479999,0,0,0.570471821544449,0,0.352303495931295,0.485618833104395,0.280901613404497,0.61246251376468,0.245668634623536,0.826606249406124,1.18800285728205,1.23633464639278,0,0,0.336672227908132,0.250237039743928,0.554128230968366,0.877955241761676,0.30648779579902,0.150238058906597,0.680593098960126,2.87023417102179,0.85422955527427,0.211931901159562,3.60109315301283,0.515262646192195,1.8034837803194,0.37223371266318,2.86919764810153,2.63079913935236,1.26216887122057,0.368199594569197,0.161646056818812,4.26011511019937,1.71278566986988,0.67824236924195,0,0,0.286804595389004,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,1.56449532329816,0,0,0.464367928031979,0,0.591534000199219,0.674338760312407,0.482022059766964,0.661763836394364,0.435758888184812,1.18635309555548,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0.492434012174795,0,0.445893486866185,0.93733833986777,0,0.141775097242386,0.53735113621709,0,0,9.85326475791887,0.264145302039678,0.829312462163088,0.288239906833923,0.50496973370552,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0.224262168690721,0,0,1.68053230485111,0,0,0,0,0,0,0.532844358032199,0,0,0,0.977208552881205,0,0,0.301439377059586,0,0.499864955910285,0,1.00451418286425,0,1.4377491329495,0,1.42636905040718,1.01346914667305,0.205476322550383,0.358121926479791,0,0,0.215627574859517,0.128343036279748,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0.749007023947182,0,0,0.36807447515742,0,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0,0,0,0,1.24053903909388,1.68808170616869,1.12264037773229,1.28139149255701,1.02341449813341,2.0911009748669,0,0.308419387605311,0.177561725313127,0.410635780069046,0.519254429183621,0.697262270759755,0,0,0.0920809889358963,0.34444334449382,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.366277859273374,0.742585499285292,0,0.650060246036521,0,0,0.308097234229289,0,0.413509717453592,0,0.145016693914229,0.170453254832202,0.178064071293475,0,0.192190067365106,0,0,0,6.61105928344344,0.6970372701606,0.308033580176089,0.532306030317022,2.60979897622522,0.9266210955196,0.286249773483982,0,0.316379424718726,0,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.117812402345686,0.404364963146632,1.58510321173008,0.421258456238981,0,0.731140468893853,0,0.409499734223957,0.141405431953713,1.13008116620243,1.65409603063837,0.66343897524122,1.31535265576129,0,0,0.405820753925408,0,0.563391205064483,0.143411352204052,0.0982490410131212,0.35667105148125,1.06428319221179,0.422215270595328,0.329294892959902,0.379473173765715,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0.432807638929335,0.284567373393656,0,0.59873811429845,0.191505370132367,2.11673582723883,0.649243880549111,1.40398589056729,0.684704037099577,0.313359791546046,0,0,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0.390776190804081,0.835218521685727,0,0.270455678475983,0.66614393599564,2.81974010175699,0,0.1465081792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|short_description=p10@GOLIM4 | |||
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Latest revision as of 14:00, 16 September 2015
Short description: | p10@GOLIM4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GOLIM4_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000309027_5end |
EntrezGene: | GOLIM4 |
HGNC: | 15448 |
UniProt: | F8W785 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data