FFCP PHASE1:Hg19::chr19:18284716..18284723,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10437 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5398 | |||
|TSSclassifier=strong | |||
|UniProt=A6XNE3 | |||
|association_with_transcript=64bp_to_AB590284,CU676848,CU689078,DQ884410,DQ892016,DQ895206_5end | |||
|cluster_id=chr19:18284716..18284723,+ | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_2_at_IFI30_5end | |||
|id=chr19:18284716..18284723,+ | |||
|ontology_enrichment_celltype=CL:0002194!8.42e-38!63;CL:0000576!8.42e-38!63;CL:0000040!8.42e-38!63;CL:0000559!8.42e-38!63;CL:0002009!2.24e-37!65;CL:0000766!2.28e-35!76;CL:0000557!4.17e-35!71;CL:0000860!2.93e-34!45;CL:0000738!1.50e-33!140;CL:0002057!5.67e-33!42;CL:0000839!5.91e-33!70;CL:0002087!1.12e-31!119;CL:0002031!5.38e-27!124;CL:0000037!8.23e-27!172;CL:0000566!8.23e-27!172;CL:0000763!1.61e-26!112;CL:0000049!1.61e-26!112;CL:0002032!1.76e-25!165;CL:0000837!1.76e-25!165;CL:0000988!3.73e-24!182;CL:0000134!1.96e-10!358;CL:0002320!4.60e-10!365;CL:0002393!3.98e-08!9;CL:0002397!3.98e-08!9;CL:0000219!6.70e-08!390;CL:0000063!6.98e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.15e-53;39!CL:0000234;1.15e-53;39!CL:0000860;5.01e-53;33!CL:0002057;5.01e-53;33!CL:0000576;3.38e-47;48!CL:0000766;7.22e-35;69!CL:0000763;5.31e-17;100!CL:0000738;8.08e-14;136!CL:0002087;3.79e-13;104!CL:0000235;9.77e-13;6!CL:0002393;1.22e-11;6!CL:0002397;1.22e-11;6!CL:0000990;2.42e-09;8!CL:0000988;1.52e-08;177!CL:0000451;2.06e-07;10!CL:0002619;5.78e-07;3!CL:0000219;9.37e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.34e-86,48;CL:0000234,5.34e-86,48;CL:0002194,1.45e-85,59;CL:0000576,1.45e-85,59;CL:0000040,1.45e-85,59;CL:0000559,1.45e-85,59;CL:0002009,2.07e-85,61;CL:0000766,3.99e-81,72;CL:0000557,6.19e-79,67;CL:0000839,1.04e-74,66;CL:0000860,3.57e-74,42;CL:0002057,3.57e-74,42;CL:0000763,1.80e-61,108;CL:0000049,1.80e-61,108;CL:0000738,1.03e-54,136;CL:0002087,3.67e-50,115;CL:0000037,3.46e-44,168;CL:0002031,7.63e-44,120;CL:0002032,1.63e-42,161;CL:0000837,1.63e-42,161;CL:0000988,7.82e-41,177;CL:0002393,1.21e-16,9;CL:0002397,1.21e-16,9;CL:0000134,4.02e-14,354;CL:0002320,1.94e-13,361;CL:0000235,9.73e-13,6;CL:0000219,4.62e-11,386;CL:0000048,1.31e-09,427;CL:0000990,2.22e-09,8;CL:0000723,3.43e-09,433;CL:0000034,1.18e-08,441;CL:0000451,1.92e-07,10;CL:0002619,5.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.90e-53;42!CL:0000049;4.48e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.99e-39!102;UBERON:0003061!4.99e-39!102;UBERON:0002193!1.98e-37!112;UBERON:0002371!6.50e-32!80;UBERON:0001474!2.36e-29!86;UBERON:0002405!4.28e-28!115;UBERON:0004765!4.52e-25!101;UBERON:0001434!4.52e-25!101;UBERON:0002204!7.83e-11!167;UBERON:0003081!3.51e-10!216;UBERON:0002384!1.49e-09!375;UBERON:0000926!2.49e-08!448;UBERON:0004120!2.49e-08!448;UBERON:0006603!2.49e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.84e-09;15!UBERON:0000179;2.84e-09;15!UBERON:0000463;2.84e-09;15!UBERON:0001737;5.51e-08;9!UBERON:0001557;5.51e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.04e-74,98;UBERON:0003061,4.04e-74,98;UBERON:0002193,1.22e-69,108;UBERON:0002371,1.61e-67,76;UBERON:0001474,2.71e-61,82;UBERON:0002405,2.79e-60,93;UBERON:0004765,2.80e-54,90;UBERON:0001434,4.32e-47,100;UBERON:0003081,1.66e-30,203;UBERON:0002204,2.91e-23,167;UBERON:0000926,5.75e-15,315;UBERON:0004120,5.75e-15,315;UBERON:0006603,5.75e-15,315;UBERON:0002384,4.15e-13,371;UBERON:0000178,2.93e-09,15;UBERON:0000179,2.93e-09,15;UBERON:0000463,2.93e-09,15;UBERON:0001737,4.69e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,1.29902789771517,0.410502947249729,0.787107813136792,3.54027849164014,3.0706351847777,4.02521920621798,0.919421224478927,0,0,1.31694240986513,0.853015394924529,0,3.87796785972314,7.01905566145496,6.07630438004385,20.1523926815932,14.5752149708541,18.8030164372956,17.4477886535478,10.5805264232867,12.6143711817664,11.6214518452842,13.5685403047203,14.5561994320699,25.6046229166714,13.3203567395132,31.6886188050704,12.0660988257816,5.16387746867061,17.6054432572644,20.8948996892291,10.643339852256,32.1354582756471,27.2414664210103,10.5906578935111,21.7374622771674,21.1104832119498,9.97318288108159,14.9178662686443,13.3496249769149,6.24123747160254,9.34233373493363,16.5824119069451,10.9511412868242,28.01736096696,13.3187890579341,12.1531619875896,19.9371304087757,33.1670799509749,29.7646019951061,14.6761051855863,14.6027220490444,14.2668048199431,3.69668849403284,6.55529310604872,30.2353349342617,11.1425133796427,0,0.546138611262131,0,0.853460445133014,1.20118796110804,1.14950487990897,0,0.954053754535364,0.569212969109448,1.17447437874188,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.523916301990851,0.728590576585084,0.370784442784429,7.7891374477124,12.1890816109487,14.758333617594,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.860509862246441,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0.558350568994769,0,0,0.252433774244115,0,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0.573609190778008,0.365921118388786,0.132529768321485,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,2.01121560067735,1.85443159085912,1.68707720918437,2.42646740011267,1.30727666455444,0.474541238222193,2.15730093056263,2.35465758150415,0.769494313892781,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0.737930631258681,0,0.219500570817251,0,0,0.370353780634118,0,0,0,0,0,0.433099343283221,1.38895653772983,0.380508304469197,0.790204397959275,0.858486162094873,22.1595305478658,11.2322047266834,27.4967650234147,0,0.503946384596579,0.141775097242386,0.179117045405697,0.581267877027924,0.766765358330422,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,81.4879330295976,49.2211949603484,59.0335030552489,0,0,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0,0,0.385029108839245,0,0,0,0,0,2.99602809578873,2.99161459204025,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0,0,1.24060815673732,8.62856803274467,3.52200940751366,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0,0,0.308419387605311,0.710246901252508,0.410635780069046,1.55776328755086,0.929683027679674,0.120859449591622,0,0.184161977871793,0.114814448164607,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,1.33953315142039,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0.48335359146061,0,0.15350367472613,0,0,0.290033387828457,0.255679882248303,0.0890320356467374,0.165284915360978,0,0,0,0,0.62962469366128,0,0.616067160352178,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0,1.27281299170375,0,0,0,0.235624804691373,0,0,0,0,1.46228093778771,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0.288666338176536,0.670302275535787,0,0.753150406214233,0.43050537267123,0,0,0.229723400206959,1.52234282769651,0.764637207142375,6.83576624608995,2.62054953003568,2.87953591160336,1.29694662238543,1.08006287447623,5.55187623405989,0.320472213382419,0,0.490080431962063,0.929015875628594,0,0,0.159426272728822,0,0.5745161103971,0.211673582723883,0,0,0,0,0,0.50787533340481,0,0,0.425846237690326,1.03051603426729,0,0,0.166849141711909,1.17232857241224,0,0,0,0,0,0,2.05111450980652,0.121360521749513,0.222886768554957,0,0.23874448473769,0.593929361665277,0,0,0.140669416410513,0.222617410045812,0.659215496907038,0,0.19924798825107,1.10513566212459,0.251932747854276,0,0.984678443688556,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,1.04171104434093,0.174919999992391,0,0.227586896570999,0.508507300585533,0.709163045303809,0,0,0,0,0,0,0,0,0.219385397153973,0.544692317594951,0.139423744278603,0.307801034015188,0,0,0.807818799687949,0,0.31900115973192,0.457987967009312,1.5991043280559,0,0.31396051279005,0.332423363800313,0.451191321234361,0.392125068635479,0,0,0,0,0.489698424477443,0,0,0,0.176915129006678,0,0,0.370691816839509,0.626531697032732,0,0,0,0.364909578431332,0.391329237864179,0.242780379534093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| |||
|short_description=p2@IFI30 | |||
}} |
Latest revision as of 14:11, 16 September 2015
Short description: | p2@IFI30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFI30_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | 64bp_to_AB590284, CU676848, CU689078, DQ884410, DQ892016, DQ895206_5end |
EntrezGene: | IFI30 |
HGNC: | 5398 |
UniProt: | A6XNE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.04e-74 | 98 |
blood island | 4.04e-74 | 98 |
hemolymphoid system | 1.22e-69 | 108 |
bone marrow | 1.61e-67 | 76 |
bone element | 2.71e-61 | 82 |
immune system | 2.79e-60 | 93 |
skeletal element | 2.80e-54 | 90 |
skeletal system | 4.32e-47 | 100 |
lateral plate mesoderm | 1.66e-30 | 203 |
musculoskeletal system | 2.91e-23 | 167 |
mesoderm | 5.75e-15 | 315 |
mesoderm-derived structure | 5.75e-15 | 315 |
presumptive mesoderm | 5.75e-15 | 315 |
connective tissue | 4.15e-13 | 371 |
blood | 2.93e-09 | 15 |
haemolymphatic fluid | 2.93e-09 | 15 |
organism substance | 2.93e-09 | 15 |
larynx | 4.69e-08 | 9 |