FFCP PHASE1:Hg19::chr16:3508063..3508086,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:3508063..3508086,+
|short_description=p2@NAA60
|description=CAGE_peak_2_at_NAA60_5end
|association_with_transcript=0bp_to_ENST00000421765_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79903 | |EntrezGene=79903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25875 | |HGNC=25875 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQ65 | |UniProt=E7EQ65 | ||
|association_with_transcript=0bp_to_ENST00000421765_5end | |||
|cluster_id=chr16:3508063..3508086,+ | |||
|description=CAGE_peak_2_at_NAA60_5end | |||
|id=chr16:3508063..3508086,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.79e-19!115;UBERON:0001049!4.44e-12!57;UBERON:0005068!4.44e-12!57;UBERON:0006241!4.44e-12!57;UBERON:0007135!4.44e-12!57;UBERON:0000062!3.62e-10!511;UBERON:0003075!5.16e-10!86;UBERON:0007284!5.16e-10!86;UBERON:0002616!8.64e-10!59;UBERON:0001017!1.57e-09!82;UBERON:0002780!2.13e-09!41;UBERON:0001890!2.13e-09!41;UBERON:0006240!2.13e-09!41;UBERON:0000025!2.34e-09!194;UBERON:0005743!2.84e-09!86;UBERON:0000955!3.59e-09!69;UBERON:0006238!3.59e-09!69;UBERON:0003080!8.43e-09!42;UBERON:0002346!4.36e-08!90;UBERON:0004111!9.60e-08!241;UBERON:0000073!1.45e-07!94;UBERON:0001016!1.45e-07!94;UBERON:0001893!2.49e-07!34;UBERON:0002619!3.68e-07!22;UBERON:0002791!4.34e-07!33;UBERON:0002020!5.82e-07!34;UBERON:0003528!5.82e-07!34;UBERON:0001869!6.18e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.22e-07;22!UBERON:0002780;5.44e-07;41!UBERON:0001890;5.44e-07;41!UBERON:0000073;6.47e-07;53!UBERON:0002616;6.47e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.43e-19,114;UBERON:0001049,1.07e-12,56;UBERON:0005068,1.07e-12,56;UBERON:0006241,1.07e-12,56;UBERON:0007135,1.07e-12,56;UBERON:0000073,5.70e-12,53;UBERON:0002616,5.70e-12,53;UBERON:0003075,1.55e-10,82;UBERON:0007284,1.55e-10,82;UBERON:0010371,1.77e-10,104;UBERON:0000025,5.43e-10,192;UBERON:0001017,6.05e-10,81;UBERON:0000955,1.28e-09,68;UBERON:0006238,1.28e-09,68;UBERON:0002780,2.13e-09,41;UBERON:0001890,2.13e-09,41;UBERON:0003080,2.13e-09,41;UBERON:0006240,2.13e-09,41;UBERON:0011216,5.47e-09,223;UBERON:0002346,1.71e-08,86;UBERON:0004111,3.39e-08,240;UBERON:0001016,4.52e-08,89;UBERON:0001893,2.49e-07,34;UBERON:0002619,3.68e-07,22;UBERON:0003056,4.44e-07,61;UBERON:0003528,5.82e-07,34;UBERON:0002020,5.82e-07,34;UBERON:0001869,6.18e-07,32 | |||
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| ||
|short_description=p2@NAA60 | |||
}} | }} |
Latest revision as of 14:50, 16 September 2015
Short description: | p2@NAA60 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAA60_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000421765_5end |
EntrezGene: | NAA60 |
HGNC: | 25875 |
UniProt: | E7EQ65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.43e-19 | 114 |
neural tube | 1.07e-12 | 56 |
neural rod | 1.07e-12 | 56 |
future spinal cord | 1.07e-12 | 56 |
neural keel | 1.07e-12 | 56 |
regional part of nervous system | 5.70e-12 | 53 |
regional part of brain | 5.70e-12 | 53 |
neural plate | 1.55e-10 | 82 |
presumptive neural plate | 1.55e-10 | 82 |
ecto-epithelium | 1.77e-10 | 104 |
tube | 5.43e-10 | 192 |
central nervous system | 6.05e-10 | 81 |
brain | 1.28e-09 | 68 |
future brain | 1.28e-09 | 68 |
regional part of forebrain | 2.13e-09 | 41 |
forebrain | 2.13e-09 | 41 |
anterior neural tube | 2.13e-09 | 41 |
future forebrain | 2.13e-09 | 41 |
organ system subdivision | 5.47e-09 | 223 |
neurectoderm | 1.71e-08 | 86 |
anatomical conduit | 3.39e-08 | 240 |
nervous system | 4.52e-08 | 89 |
telencephalon | 2.49e-07 | 34 |
regional part of cerebral cortex | 3.68e-07 | 22 |
pre-chordal neural plate | 4.44e-07 | 61 |
brain grey matter | 5.82e-07 | 34 |
gray matter | 5.82e-07 | 34 |
cerebral hemisphere | 6.18e-07 | 32 |