FFCP PHASE1:Hg19::chr2:27301661..27301672,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11117 | |EntrezGene=11117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19880 | |HGNC=19880 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IH6 | |UniProt=Q96IH6 | ||
|association_with_transcript=-89bp_to_ENST00000544143_5end | |association_with_transcript=-89bp_to_ENST00000544143_5end | ||
|cluster_id=chr2:27301661..27301672,+ | |||
|coexpression_cluster_id=C1901 | |||
|description=CAGE_peak_4_at_EMILIN1_5end | |description=CAGE_peak_4_at_EMILIN1_5end | ||
|id=chr2:27301661..27301672,+ | |id=chr2:27301661..27301672,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.89e-36!180;CL:0000680!7.90e-21!57;CL:0000056!7.90e-21!57;CL:0000355!7.90e-21!57;CL:0000057!2.02e-20!75;CL:0000187!7.44e-20!54;CL:0000183!5.26e-19!59;CL:0000393!9.32e-18!60;CL:0000211!9.32e-18!60;CL:0000192!2.38e-14!42;CL:0000514!2.38e-14!42;CL:0000048!1.16e-12!430;CL:0000723!1.55e-11!436;CL:0000034!5.98e-11!444;CL:0000359!1.13e-09!32;CL:0002620!3.30e-09!23;CL:0002494!6.30e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.89e-36!180;CL:0000680!7.90e-21!57;CL:0000056!7.90e-21!57;CL:0000355!7.90e-21!57;CL:0000057!2.02e-20!75;CL:0000187!7.44e-20!54;CL:0000183!5.26e-19!59;CL:0000393!9.32e-18!60;CL:0000211!9.32e-18!60;CL:0000192!2.38e-14!42;CL:0000514!2.38e-14!42;CL:0000048!1.16e-12!430;CL:0000723!1.55e-11!436;CL:0000034!5.98e-11!444;CL:0000359!1.13e-09!32;CL:0002620!3.30e-09!23;CL:0002494!6.30e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000134;7.38e-12;55!CL:0000187;9.78e-12;55!CL:0000723;3.50e-11;61!CL:0000192;9.12e-11;43!CL:0000048;1.03e-10;58!CL:0002620;3.07e-10;23!CL:0002320;8.38e-09;188!CL:0000393;8.98e-09;61!CL:0000211;8.98e-09;61!CL:0000057;2.69e-08;73!CL:0000034;3.69e-08;69!CL:0002494;4.54e-08;16!CL:0000359;7.03e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.49e-23,76;CL:0000680,1.25e-21,58;CL:0000056,1.25e-21,58;CL:0000355,1.25e-21,58;CL:0000187,1.83e-20,55;CL:0000048,1.39e-17,427;CL:0000393,1.19e-16,61;CL:0000211,1.19e-16,61;CL:0000723,1.58e-16,433;CL:0000034,3.49e-15,441;CL:0000192,4.50e-14,43;CL:0000514,4.50e-14,43;CL:0002620,3.99e-10,23;CL:0002494,3.38e-08,16;CL:0000359,3.99e-08,32;CL:0002320,1.87e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000355;1.27e-11;58!CL:0000514;9.12e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!1.01e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.13e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.56e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.40e-25!83;UBERON:0002329!4.40e-25!83;UBERON:0003077!4.40e-25!83;UBERON:0003059!4.40e-25!83;UBERON:0007282!4.40e-25!83;UBERON:0009618!4.40e-25!83;UBERON:0007285!4.40e-25!83;UBERON:0004290!5.70e-24!70;UBERON:0002385!6.11e-22!63;UBERON:0001015!6.11e-22!63;UBERON:0000383!6.11e-22!63;UBERON:0001134!2.84e-21!61;UBERON:0002036!2.84e-21!61;UBERON:0003082!2.84e-21!61;UBERON:0000486!5.33e-18!82;UBERON:0005256!2.51e-17!143;UBERON:0004872!2.72e-11!84;UBERON:0000468!2.49e-10!659;UBERON:0000475!2.00e-09!365;UBERON:0002100!2.33e-09!216;UBERON:0000481!5.49e-09!347;UBERON:0002049!7.51e-09!79;UBERON:0007798!7.51e-09!79;UBERON:0000479!1.93e-08!787;UBERON:0000948!2.19e-08!24;UBERON:0005498!2.19e-08!24;UBERON:0004140!2.19e-08!24;UBERON:0009881!2.19e-08!24;UBERON:0004141!2.19e-08!24;UBERON:0003084!2.19e-08!24;UBERON:0007005!2.19e-08!24;UBERON:0004139!2.19e-08!24;UBERON:0004291!2.19e-08!24;UBERON:0001009!2.26e-08!113;UBERON:0007100!2.67e-08!27;UBERON:0000490!3.37e-08!138;UBERON:0004535!3.47e-08!110;UBERON:0001981!1.54e-07!60;UBERON:0007500!1.54e-07!60;UBERON:0004537!1.54e-07!60;UBERON:0006965!1.54e-07!60;UBERON:0003102!1.94e-07!95;UBERON:0002199!1.96e-07!45;UBERON:0002416!1.96e-07!45;UBERON:0003914!1.97e-07!118;UBERON:0004573!4.52e-07!33;UBERON:0004571!4.52e-07!33;UBERON:0003104!4.70e-07!238;UBERON:0009142!4.70e-07!238;UBERON:0001637!5.11e-07!42;UBERON:0003509!5.11e-07!42;UBERON:0004572!5.11e-07!42;UBERON:0000055!7.89e-07!69;UBERON:0001013!8.38e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.68e-12;31!UBERON:0001015;1.68e-12;31!UBERON:0000383;1.68e-12;31!UBERON:0002204;8.16e-09;70!UBERON:0002384;3.54e-08;198!UBERON:0004573;2.33e-07;33!UBERON:0004571;2.33e-07;33!UBERON:0001134;3.39e-07;16!UBERON:0002036;3.39e-07;16!UBERON:0000948;3.74e-07;22!UBERON:0001013;4.08e-07;14!UBERON:0001135;4.32e-07;15 | |||
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| ||
|short_description=p4@EMILIN1 | |short_description=p4@EMILIN1 | ||
}} | }} |
Latest revision as of 15:58, 16 September 2015
Short description: | p4@EMILIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EMILIN1_5end |
Coexpression cluster: | C1901_Cardiac_tridermal_Mesenchymal_sacrococcigeal_Hepatic_Smooth_Myoblast |
Association with transcript: | -89bp_to_ENST00000544143_5end |
EntrezGene: | EMILIN1 |
HGNC: | 19880 |
UniProt: | Q96IH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.49e-23 | 76 |
muscle precursor cell | 1.25e-21 | 58 |
myoblast | 1.25e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.25e-21 | 58 |
muscle cell | 1.83e-20 | 55 |
multi fate stem cell | 1.39e-17 | 427 |
electrically responsive cell | 1.19e-16 | 61 |
electrically active cell | 1.19e-16 | 61 |
somatic stem cell | 1.58e-16 | 433 |
stem cell | 3.49e-15 | 441 |
smooth muscle cell | 4.50e-14 | 43 |
smooth muscle myoblast | 4.50e-14 | 43 |
skin fibroblast | 3.99e-10 | 23 |
cardiocyte | 3.38e-08 | 16 |
vascular associated smooth muscle cell | 3.99e-08 | 32 |
connective tissue cell | 1.87e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.56e-09 | 14 |