FFCP PHASE1:Hg19::chr19:18682661..18682686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7311 | |EntrezGene=7311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12458 | |HGNC=12458 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_uc002njt.2_5end | |association_with_transcript=-2bp_to_uc002njt.2_5end | ||
|cluster_id=chr19:18682661..18682686,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_1_at_UBA52_5end | |description=CAGE_peak_1_at_UBA52_5end | ||
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|ontology_enrichment_celltype_v019=CL:0000860;3.44e-11;33!CL:0002057;3.44e-11;33!CL:0000473;1.50e-09;39!CL:0000234;1.50e-09;39!CL:0000576;1.09e-08;48!CL:0000791;1.55e-07;18!CL:0000789;1.55e-07;18!CL:0002419;1.55e-07;18!CL:0000084;3.59e-07;25!CL:0002087;7.26e-07;104!CL:0000236;8.83e-07;13 | |ontology_enrichment_celltype_v019=CL:0000860;3.44e-11;33!CL:0002057;3.44e-11;33!CL:0000473;1.50e-09;39!CL:0000234;1.50e-09;39!CL:0000576;1.09e-08;48!CL:0000791;1.55e-07;18!CL:0000789;1.55e-07;18!CL:0002419;1.55e-07;18!CL:0000084;3.59e-07;25!CL:0002087;7.26e-07;104!CL:0000236;8.83e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.27e-21,115;CL:0000037,9.84e-21,168;CL:0002031,1.74e-20,120;CL:0000988,1.99e-20,177;CL:0002032,3.65e-20,161;CL:0000837,3.65e-20,161;CL:0000738,4.08e-17,136;CL:0000034,5.24e-17,441;CL:0000048,5.92e-17,427;CL:0000723,7.78e-17,433;CL:0000473,2.67e-15,48;CL:0000234,2.67e-15,48;CL:0000860,3.57e-15,42;CL:0002057,3.57e-15,42;CL:0002009,7.81e-14,61;CL:0002320,1.15e-13,361;CL:0002194,3.45e-13,59;CL:0000576,3.45e-13,59;CL:0000040,3.45e-13,59;CL:0000559,3.45e-13,59;CL:0000134,1.05e-12,354;CL:0000763,1.76e-11,108;CL:0000049,1.76e-11,108;CL:0000839,1.97e-11,66;CL:0000557,1.15e-10,67;CL:0000219,7.02e-10,386;CL:0000542,6.00e-09,53;CL:0000051,6.00e-09,53;CL:0000838,6.70e-09,52;CL:0000766,7.71e-09,72;CL:0000791,1.53e-07,18;CL:0000789,1.53e-07,18;CL:0002420,1.53e-07,18;CL:0002419,1.53e-07,18;CL:0000790,1.53e-07,18;CL:0000084,3.49e-07,25;CL:0000827,3.49e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;2.85e-11;42!CL:0000790;1.55e-07;18 | |ontology_enrichment_development_v019=CL:0002057;2.85e-11;42!CL:0000790;1.55e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.19e-16!216;UBERON:0002384!9.34e-13!375;UBERON:0002390!8.59e-11!102;UBERON:0003061!8.59e-11!102;UBERON:0002204!9.14e-11!167;UBERON:0002193!3.19e-10!112;UBERON:0002371!5.81e-09!80;UBERON:0001474!1.76e-07!86 | |ontology_enrichment_uberon=UBERON:0003081!6.19e-16!216;UBERON:0002384!9.34e-13!375;UBERON:0002390!8.59e-11!102;UBERON:0003061!8.59e-11!102;UBERON:0002204!9.14e-11!167;UBERON:0002193!3.19e-10!112;UBERON:0002371!5.81e-09!80;UBERON:0001474!1.76e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.76e-17,203;UBERON:0002384,2.20e-13,371;UBERON:0000926,3.87e-13,315;UBERON:0004120,3.87e-13,315;UBERON:0006603,3.87e-13,315;UBERON:0002390,2.37e-12,98;UBERON:0003061,2.37e-12,98;UBERON:0002204,2.77e-12,167;UBERON:0002193,1.22e-11,108;UBERON:0002371,1.45e-10,76;UBERON:0004765,2.28e-09,90;UBERON:0001474,7.88e-09,82;UBERON:0002405,8.07e-09,93;UBERON:0001434,6.79e-08,100;UBERON:0007503,7.48e-07,78 | |||
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| ||
|short_description=p1@UBA52 | |short_description=p1@UBA52 | ||
}} | }} |
Latest revision as of 16:53, 16 September 2015
Short description: | p1@UBA52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBA52_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -2bp_to_uc002njt.2_5end |
EntrezGene: | UBA52 |
HGNC: | 12458 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.76e-17 | 203 |
connective tissue | 2.20e-13 | 371 |
mesoderm | 3.87e-13 | 315 |
mesoderm-derived structure | 3.87e-13 | 315 |
presumptive mesoderm | 3.87e-13 | 315 |
hematopoietic system | 2.37e-12 | 98 |
blood island | 2.37e-12 | 98 |
musculoskeletal system | 2.77e-12 | 167 |
hemolymphoid system | 1.22e-11 | 108 |
bone marrow | 1.45e-10 | 76 |
skeletal element | 2.28e-09 | 90 |
bone element | 7.88e-09 | 82 |
immune system | 8.07e-09 | 93 |
skeletal system | 6.79e-08 | 100 |
epithelial vesicle | 7.48e-07 | 78 |