FFCP PHASE1:Hg19::chr4:170533723..170533789,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4750 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7744 | |||
|TSSclassifier=strong | |||
|UniProt=Q96PY6,D6RBG5,G5E9Z3,Q5JXL9 | |||
|association_with_transcript=0bp_to_ENST00000439128,ENST00000507142,ENST00000510108,ENST00000510533,ENST00000511633,ENST00000512193,NM_001199397,NM_001199398,NM_001199399,NM_001199400,NM_012224,uc003isd.1,uc003ise.1,uc003isf.1_5end | |||
|cluster_id=chr4:170533723..170533789,- | |||
|description=CAGE_peak_1_at_NEK1_5end | |||
|id=chr4:170533723..170533789,- | |||
|ontology_enrichment_celltype=CL:0000542!1.90e-07!53;CL:0000051!1.90e-07!53;CL:0000838!2.00e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.90e-07,53;CL:0000051,1.90e-07,53;CL:0000838,2.00e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.44e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-35!115;UBERON:0001049!5.13e-25!57;UBERON:0005068!5.13e-25!57;UBERON:0006241!5.13e-25!57;UBERON:0007135!5.13e-25!57;UBERON:0002616!2.97e-22!59;UBERON:0002780!4.18e-21!41;UBERON:0001890!4.18e-21!41;UBERON:0006240!4.18e-21!41;UBERON:0003080!5.08e-21!42;UBERON:0000955!6.22e-21!69;UBERON:0006238!6.22e-21!69;UBERON:0001017!1.81e-20!82;UBERON:0005743!3.48e-19!86;UBERON:0002020!7.19e-18!34;UBERON:0003528!7.19e-18!34;UBERON:0000073!7.88e-18!94;UBERON:0001016!7.88e-18!94;UBERON:0001893!8.40e-18!34;UBERON:0002791!3.11e-17!33;UBERON:0001869!1.52e-16!32;UBERON:0000153!4.38e-15!129;UBERON:0007811!4.38e-15!129;UBERON:0003075!4.56e-15!86;UBERON:0007284!4.56e-15!86;UBERON:0002346!1.19e-13!90;UBERON:0002619!3.55e-13!22;UBERON:0000033!6.47e-13!123;UBERON:0000956!1.53e-12!25;UBERON:0000203!1.53e-12!25;UBERON:0001950!1.72e-12!20;UBERON:0003056!1.29e-11!61;UBERON:0004121!3.77e-11!169;UBERON:0000924!2.10e-10!173;UBERON:0006601!2.10e-10!173;UBERON:0002308!6.66e-07!9;UBERON:0000125!6.66e-07!9;UBERON:0002420!8.54e-07!9;UBERON:0007245!8.54e-07!9;UBERON:0010009!8.54e-07!9;UBERON:0010011!8.54e-07!9;UBERON:0000454!8.54e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.04e-15;41!UBERON:0001890;2.04e-15;41!UBERON:0001893;3.62e-15;34!UBERON:0003528;3.96e-15;34!UBERON:0002020;3.96e-15;34!UBERON:0002791;4.23e-15;32!UBERON:0001869;5.57e-15;32!UBERON:0000073;7.02e-14;53!UBERON:0002616;7.02e-14;53!UBERON:0002619;3.13e-13;22!UBERON:0001950;1.69e-12;20!UBERON:0000956;1.74e-12;25!UBERON:0000203;1.74e-12;25!UBERON:0007023;3.93e-11;114!UBERON:0001017;5.41e-10;75!UBERON:0000955;2.65e-09;68!UBERON:0001016;1.86e-08;83!UBERON:0000125;6.62e-07;9!UBERON:0002308;6.62e-07;9!UBERON:0002420;8.52e-07;9!UBERON:0007245;8.52e-07;9!UBERON:0010009;8.52e-07;9!UBERON:0010011;8.52e-07;9!UBERON:0000454;8.52e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.09e-35,114;UBERON:0001049,4.61e-25,56;UBERON:0005068,4.61e-25,56;UBERON:0006241,4.61e-25,56;UBERON:0007135,4.61e-25,56;UBERON:0000073,2.43e-23,53;UBERON:0002616,2.43e-23,53;UBERON:0002780,4.18e-21,41;UBERON:0001890,4.18e-21,41;UBERON:0003080,4.18e-21,41;UBERON:0006240,4.18e-21,41;UBERON:0000955,6.57e-21,68;UBERON:0006238,6.57e-21,68;UBERON:0001017,2.02e-20,81;UBERON:0001016,7.14e-19,89;UBERON:0003528,7.19e-18,34;UBERON:0002020,7.19e-18,34;UBERON:0001893,8.40e-18,34;UBERON:0002791,1.23e-16,32;UBERON:0001869,1.52e-16,32;UBERON:0003075,3.69e-16,82;UBERON:0007284,3.69e-16,82;UBERON:0002346,1.28e-14,86;UBERON:0010371,2.24e-14,104;UBERON:0002619,3.55e-13,22;UBERON:0000956,1.53e-12,25;UBERON:0000203,1.53e-12,25;UBERON:0001950,1.72e-12,20;UBERON:0003056,5.05e-12,61;UBERON:0004121,5.59e-11,171;UBERON:0000924,5.59e-11,171;UBERON:0006601,5.59e-11,171;UBERON:0010314,6.24e-10,132;UBERON:0000125,6.66e-07,9;UBERON:0002308,6.66e-07,9;UBERON:0002420,8.54e-07,9;UBERON:0007245,8.54e-07,9;UBERON:0010009,8.54e-07,9;UBERON:0010011,8.54e-07,9;UBERON:0000454,8.54e-07,9 | |||
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| |||
|short_description=p1@NEK1 | |||
}} |
Latest revision as of 17:33, 16 September 2015
Short description: | p1@NEK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439128, ENST00000507142, ENST00000510108, ENST00000510533, ENST00000511633, ENST00000512193, NM_001199397, NM_001199398, NM_001199399, NM_001199400, NM_012224, uc003isd.1, uc003ise.1, uc003isf.1_5end |
EntrezGene: | NEK1 |
HGNC: | 7744 |
UniProt: | Q96PY6D6RBG5G5E9Z3Q5JXL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.90e-07 | 53 |
common lymphoid progenitor | 1.90e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.00e-07 | 52 |