FFCP PHASE1:Hg19::chr2:12857131..12857157,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28951 | |EntrezGene=28951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30809 | |HGNC=30809 | ||
|TSSclassifier=strong | |||
|UniProt=F8WA18 | |UniProt=F8WA18 | ||
|association_with_transcript=70bp_to_ENST00000381465_5end | |association_with_transcript=70bp_to_ENST00000381465_5end | ||
|cluster_id=chr2:12857131..12857157,+ | |||
|description=CAGE_peak_2_at_TRIB2_5end | |description=CAGE_peak_2_at_TRIB2_5end | ||
|id=chr2:12857131..12857157,+ | |id=chr2:12857131..12857157,+ | ||
|ontology_enrichment_celltype=CL:0000791!7.52e-07!18;CL:0000789!7.52e-07!18;CL:0002420!7.52e-07!18;CL:0002419!7.52e-07!18;CL:0000790!7.52e-07!18 | |ontology_enrichment_celltype=CL:0000791!7.52e-07!18;CL:0000789!7.52e-07!18;CL:0002420!7.52e-07!18;CL:0002419!7.52e-07!18;CL:0000790!7.52e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.97e-07;18!CL:0000789;5.97e-07;18!CL:0002419;5.97e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.31e-07,18;CL:0000789,4.31e-07,18;CL:0002420,4.31e-07,18;CL:0002419,4.31e-07,18;CL:0000790,4.31e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;5.97e-07;18 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.88e-13!115;UBERON:0001017!3.47e-11!82;UBERON:0000073!3.82e-11!94;UBERON:0001016!3.82e-11!94;UBERON:0005743!4.10e-11!86;UBERON:0002616!6.78e-11!59;UBERON:0001049!4.23e-10!57;UBERON:0005068!4.23e-10!57;UBERON:0006241!4.23e-10!57;UBERON:0007135!4.23e-10!57;UBERON:0000955!1.66e-09!69;UBERON:0006238!1.66e-09!69;UBERON:0003075!4.25e-09!86;UBERON:0007284!4.25e-09!86;UBERON:0002346!1.53e-08!90;UBERON:0000153!3.80e-08!129;UBERON:0007811!3.80e-08!129;UBERON:0003080!5.32e-08!42;UBERON:0004121!1.28e-07!169;UBERON:0002780!1.50e-07!41;UBERON:0001890!1.50e-07!41;UBERON:0006240!1.50e-07!41;UBERON:0001009!1.61e-07!113;UBERON:0000924!2.48e-07!173;UBERON:0006601!2.48e-07!173;UBERON:0000033!3.64e-07!123;UBERON:0003056!5.38e-07!61;UBERON:0000025!5.59e-07!194;UBERON:0001869!6.20e-07!32;UBERON:0004535!6.37e-07!110;UBERON:0002020!7.29e-07!34;UBERON:0003528!7.29e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.87e-07;32!UBERON:0000956;6.92e-07;25!UBERON:0000203;6.92e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.56e-13,114;UBERON:0001017,1.97e-10,81;UBERON:0003075,2.58e-10,82;UBERON:0007284,2.58e-10,82;UBERON:0001016,3.89e-10,89;UBERON:0001049,6.25e-10,56;UBERON:0005068,6.25e-10,56;UBERON:0006241,6.25e-10,56;UBERON:0007135,6.25e-10,56;UBERON:0000073,1.73e-09,53;UBERON:0002616,1.73e-09,53;UBERON:0002346,2.14e-09,86;UBERON:0010314,3.11e-09,132;UBERON:0000955,6.15e-09,68;UBERON:0006238,6.15e-09,68;UBERON:0002780,5.86e-08,41;UBERON:0001890,5.86e-08,41;UBERON:0003080,5.86e-08,41;UBERON:0006240,5.86e-08,41;UBERON:0010371,7.52e-08,104;UBERON:0001869,2.52e-07,32;UBERON:0003528,3.02e-07,34;UBERON:0002020,3.02e-07,34;UBERON:0001893,4.69e-07,34;UBERON:0002791,4.91e-07,32;UBERON:0004121,5.46e-07,171;UBERON:0000924,5.46e-07,171;UBERON:0006601,5.46e-07,171;UBERON:0000956,5.94e-07,25;UBERON:0000203,5.94e-07,25;UBERON:0003056,9.98e-07,61 | |||
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| ||
|short_description=p2@TRIB2 | |short_description=p2@TRIB2 | ||
}} | }} |
Latest revision as of 21:29, 16 September 2015
Short description: | p2@TRIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_ENST00000381465_5end |
EntrezGene: | TRIB2 |
HGNC: | 30809 |
UniProt: | F8WA18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.31e-07 | 18 |
alpha-beta T cell | 4.31e-07 | 18 |
immature T cell | 4.31e-07 | 18 |
mature T cell | 4.31e-07 | 18 |
immature alpha-beta T cell | 4.31e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.56e-13 | 114 |
central nervous system | 1.97e-10 | 81 |
neural plate | 2.58e-10 | 82 |
presumptive neural plate | 2.58e-10 | 82 |
nervous system | 3.89e-10 | 89 |
neural tube | 6.25e-10 | 56 |
neural rod | 6.25e-10 | 56 |
future spinal cord | 6.25e-10 | 56 |
neural keel | 6.25e-10 | 56 |
regional part of nervous system | 1.73e-09 | 53 |
regional part of brain | 1.73e-09 | 53 |
neurectoderm | 2.14e-09 | 86 |
structure with developmental contribution from neural crest | 3.11e-09 | 132 |
brain | 6.15e-09 | 68 |
future brain | 6.15e-09 | 68 |
regional part of forebrain | 5.86e-08 | 41 |
forebrain | 5.86e-08 | 41 |
anterior neural tube | 5.86e-08 | 41 |
future forebrain | 5.86e-08 | 41 |
ecto-epithelium | 7.52e-08 | 104 |
cerebral hemisphere | 2.52e-07 | 32 |
brain grey matter | 3.02e-07 | 34 |
gray matter | 3.02e-07 | 34 |
telencephalon | 4.69e-07 | 34 |
regional part of telencephalon | 4.91e-07 | 32 |
ectoderm-derived structure | 5.46e-07 | 171 |
ectoderm | 5.46e-07 | 171 |
presumptive ectoderm | 5.46e-07 | 171 |
cerebral cortex | 5.94e-07 | 25 |
pallium | 5.94e-07 | 25 |
pre-chordal neural plate | 9.98e-07 | 61 |