FFCP PHASE1:Hg19::chr1:151762943..151763012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11022 | |EntrezGene=11022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11713 | |HGNC=11713 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SZR4,Q9Y2W6,B7ZAG4,Q5SZR5 | |UniProt=Q5SZR4,Q9Y2W6,B7ZAG4,Q5SZR5 | ||
|association_with_transcript=0bp_to_ENST00000368823,ENST00000368824,ENST00000368825,ENST00000368827,ENST00000458431,ENST00000463553,ENST00000486986,ENST00000525790,NM_001083963,NM_001083964,NM_001083965,NM_006862,uc001eyy.2,uc001eza.3,uc001ezb.3,uc001ezc.3,uc001ezd.3,uc009wnb.1,uc010pdn.1_5end | |association_with_transcript=0bp_to_ENST00000368823,ENST00000368824,ENST00000368825,ENST00000368827,ENST00000458431,ENST00000463553,ENST00000486986,ENST00000525790,NM_001083963,NM_001083964,NM_001083965,NM_006862,uc001eyy.2,uc001eza.3,uc001ezb.3,uc001ezc.3,uc001ezd.3,uc009wnb.1,uc010pdn.1_5end | ||
|cluster_id=chr1:151762943..151763012,- | |||
|description=CAGE_peak_1_at_TDRKH_5end | |description=CAGE_peak_1_at_TDRKH_5end | ||
|id=chr1:151762943..151763012,- | |id=chr1:151762943..151763012,- | ||
|ontology_enrichment_celltype=CL:0000066!9.25e-12!254 | |ontology_enrichment_celltype=CL:0000066!9.25e-12!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.45e-12,253 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.49e-08;82 | |||
|ontology_enrichment_disease=DOID:162!8.54e-16!235;DOID:0050687!9.93e-16!143;DOID:14566!2.52e-15!239;DOID:305!2.62e-15!106;DOID:0050686!6.41e-09!137 | |ontology_enrichment_disease=DOID:162!8.54e-16!235;DOID:0050687!9.93e-16!143;DOID:14566!2.52e-15!239;DOID:305!2.62e-15!106;DOID:0050686!6.41e-09!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.05e-16,235;DOID:0050687,1.17e-15,143;DOID:305,2.27e-15,106;DOID:14566,2.83e-15,239;DOID:0050686,4.35e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.34e-24!94;UBERON:0001016!1.34e-24!94;UBERON:0005743!2.67e-23!86;UBERON:0001017!2.67e-22!82;UBERON:0001049!2.54e-20!57;UBERON:0005068!2.54e-20!57;UBERON:0006241!2.54e-20!57;UBERON:0007135!2.54e-20!57;UBERON:0000955!1.22e-19!69;UBERON:0006238!1.22e-19!69;UBERON:0003075!7.56e-18!86;UBERON:0007284!7.56e-18!86;UBERON:0007023!1.26e-17!115;UBERON:0002346!1.57e-17!90;UBERON:0002780!1.59e-17!41;UBERON:0001890!1.59e-17!41;UBERON:0006240!1.59e-17!41;UBERON:0002616!1.49e-16!59;UBERON:0003080!2.94e-16!42;UBERON:0004121!3.74e-16!169;UBERON:0000924!3.93e-16!173;UBERON:0006601!3.93e-16!173;UBERON:0002020!2.50e-15!34;UBERON:0003528!2.50e-15!34;UBERON:0001893!2.88e-15!34;UBERON:0003056!5.68e-15!61;UBERON:0002791!1.10e-14!33;UBERON:0001869!1.14e-14!32;UBERON:0000153!4.70e-14!129;UBERON:0007811!4.70e-14!129;UBERON:0000033!2.10e-13!123;UBERON:0000956!8.73e-12!25;UBERON:0000203!8.73e-12!25;UBERON:0002619!2.92e-11!22;UBERON:0001950!3.18e-10!20;UBERON:0000064!1.47e-07!219 | |ontology_enrichment_uberon=UBERON:0000073!1.34e-24!94;UBERON:0001016!1.34e-24!94;UBERON:0005743!2.67e-23!86;UBERON:0001017!2.67e-22!82;UBERON:0001049!2.54e-20!57;UBERON:0005068!2.54e-20!57;UBERON:0006241!2.54e-20!57;UBERON:0007135!2.54e-20!57;UBERON:0000955!1.22e-19!69;UBERON:0006238!1.22e-19!69;UBERON:0003075!7.56e-18!86;UBERON:0007284!7.56e-18!86;UBERON:0007023!1.26e-17!115;UBERON:0002346!1.57e-17!90;UBERON:0002780!1.59e-17!41;UBERON:0001890!1.59e-17!41;UBERON:0006240!1.59e-17!41;UBERON:0002616!1.49e-16!59;UBERON:0003080!2.94e-16!42;UBERON:0004121!3.74e-16!169;UBERON:0000924!3.93e-16!173;UBERON:0006601!3.93e-16!173;UBERON:0002020!2.50e-15!34;UBERON:0003528!2.50e-15!34;UBERON:0001893!2.88e-15!34;UBERON:0003056!5.68e-15!61;UBERON:0002791!1.10e-14!33;UBERON:0001869!1.14e-14!32;UBERON:0000153!4.70e-14!129;UBERON:0007811!4.70e-14!129;UBERON:0000033!2.10e-13!123;UBERON:0000956!8.73e-12!25;UBERON:0000203!8.73e-12!25;UBERON:0002619!2.92e-11!22;UBERON:0001950!3.18e-10!20;UBERON:0000064!1.47e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.72e-13;34!UBERON:0001869;2.34e-13;32!UBERON:0003528;2.73e-13;34!UBERON:0002020;2.73e-13;34!UBERON:0002780;5.00e-13;41!UBERON:0001890;5.00e-13;41!UBERON:0002791;5.10e-13;32!UBERON:0000073;1.50e-12;53!UBERON:0002616;1.50e-12;53!UBERON:0000956;7.31e-12;25!UBERON:0000203;7.31e-12;25!UBERON:0002619;3.15e-11;22!UBERON:0001950;3.61e-10;20!UBERON:0000955;5.44e-10;68!UBERON:0001017;2.03e-09;75!UBERON:0001016;7.80e-09;83 | |||
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| ||
|short_description=p1@TDRKH | |short_description=p1@TDRKH | ||
}} | }} |
Latest revision as of 01:36, 17 September 2015
Short description: | p1@TDRKH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TDRKH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368823, ENST00000368824, ENST00000368825, ENST00000368827, ENST00000458431, ENST00000463553, ENST00000486986, ENST00000525790, NM_001083963, NM_001083964, NM_001083965, NM_006862, uc001eyy.2, uc001eza.3, uc001ezb.3, uc001ezc.3, uc001ezd.3, uc009wnb.1, uc010pdn.1_5end |
EntrezGene: | TDRKH |
HGNC: | 11713 |
UniProt: | Q5SZR4Q9Y2W6B7ZAG4Q5SZR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.45e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.05e-16 | 235 |
cell type cancer | 1.17e-15 | 143 |
carcinoma | 2.27e-15 | 106 |
disease of cellular proliferation | 2.83e-15 | 239 |
organ system cancer | 4.35e-09 | 137 |