FFCP PHASE1:Hg19::chr2:136873074..136873119,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:136873074..136873119,-
|short_description=p5@CXCR4
|description=CAGE_peak_5_at_CXCR4_5end
|association_with_transcript=-20bp_to_AY826773_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7852 | |EntrezGene=7852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2561 | |HGNC=2561 | ||
|TSSclassifier=strong | |||
|UniProt=Q5MIL4 | |UniProt=Q5MIL4 | ||
|association_with_transcript=-20bp_to_AY826773_5end | |||
|cluster_id=chr2:136873074..136873119,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_5_at_CXCR4_5end | |||
|id=chr2:136873074..136873119,- | |||
|ontology_enrichment_celltype=CL:0000738!3.81e-64!140;CL:0002087!5.23e-58!119;CL:0000037!1.56e-57!172;CL:0000566!1.56e-57!172;CL:0000988!6.20e-55!182;CL:0002032!1.11e-51!165;CL:0000837!1.11e-51!165;CL:0002031!8.33e-50!124;CL:0000766!6.84e-30!76;CL:0002194!7.93e-27!63;CL:0000576!7.93e-27!63;CL:0000040!7.93e-27!63;CL:0000559!7.93e-27!63;CL:0000542!1.01e-26!53;CL:0000051!1.01e-26!53;CL:0000838!4.13e-26!52;CL:0000860!1.79e-25!45;CL:0002009!2.37e-25!65;CL:0002057!5.70e-25!42;CL:0000763!3.38e-24!112;CL:0000049!3.38e-24!112;CL:0000839!5.16e-24!70;CL:0000557!1.18e-22!71;CL:0000084!6.33e-13!25;CL:0000827!6.33e-13!25;CL:0000791!1.49e-12!18;CL:0000789!1.49e-12!18;CL:0002420!1.49e-12!18;CL:0002419!1.49e-12!18;CL:0000790!1.49e-12!18;CL:0000945!6.28e-12!24;CL:0000826!6.28e-12!24;CL:0000236!1.58e-09!14;CL:0000094!7.80e-09!8;CL:0000134!9.31e-08!358;CL:0002393!4.17e-07!9;CL:0002397!4.17e-07!9;CL:0002320!5.33e-07!365;CL:0000624!5.85e-07!6;CL:0000625!6.17e-07!11;CL:0000081!6.24e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.72e-22;33!CL:0002057;3.72e-22;33!CL:0000473;1.20e-17;39!CL:0000234;1.20e-17;39!CL:0000576;6.79e-17;48!CL:0000094;5.85e-16;8!CL:0000766;4.00e-15;69!CL:0002087;5.00e-14;104!CL:0000236;1.50e-12;13!CL:0000624;2.96e-12;6!CL:0000738;3.39e-12;136!CL:0000542;2.09e-11;53!CL:0000791;3.60e-11;18!CL:0000789;3.60e-11;18!CL:0002419;3.60e-11;18!CL:0000081;4.26e-11;11!CL:0002393;3.79e-10;6!CL:0002397;3.79e-10;6!CL:0000084;1.37e-08;25!CL:0000763;1.20e-07;100!CL:0000775;1.87e-07;3!CL:0000988;3.41e-07;177!CL:0000898;5.03e-07;3!CL:0000226;6.42e-07;3!CL:0000842;6.42e-07;3!CL:0000623;9.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.53e-57,136;CL:0002087,6.67e-47,115;CL:0000037,6.85e-45,168;CL:0000988,7.92e-43,177;CL:0002032,4.73e-38,161;CL:0000837,4.73e-38,161;CL:0002031,2.83e-37,120;CL:0000766,5.83e-33,72;CL:0000860,2.55e-30,42;CL:0002057,2.55e-30,42;CL:0000473,1.65e-29,48;CL:0000234,1.65e-29,48;CL:0002194,5.18e-25,59;CL:0000576,5.18e-25,59;CL:0000040,5.18e-25,59;CL:0000559,5.18e-25,59;CL:0002009,7.10e-24,61;CL:0000557,2.72e-22,67;CL:0000839,2.44e-21,66;CL:0000763,4.52e-20,108;CL:0000049,4.52e-20,108;CL:0000542,3.96e-17,53;CL:0000051,3.96e-17,53;CL:0000838,3.12e-16,52;CL:0000094,5.47e-16,8;CL:0000624,2.79e-12,6;CL:0000236,1.01e-11,14;CL:0000791,3.29e-11,18;CL:0000789,3.29e-11,18;CL:0002420,3.29e-11,18;CL:0002419,3.29e-11,18;CL:0000790,3.29e-11,18;CL:0000081,4.07e-11,11;CL:0000134,1.21e-10,354;CL:0002320,4.42e-10,361;CL:0000084,1.48e-08,25;CL:0000827,1.48e-08,25;CL:0002393,1.75e-08,9;CL:0002397,1.75e-08,9;CL:0000219,3.96e-08,386;CL:0000775,1.88e-07,3;CL:0000034,2.15e-07,441;CL:0000898,5.00e-07,3;CL:0000048,5.83e-07,427;CL:0000226,6.57e-07,3;CL:0000842,6.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-22;42!CL:0000051;2.09e-11;53!CL:0000790;3.60e-11;18!CL:0000049;2.27e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.64e-32!102;UBERON:0003061!8.64e-32!102;UBERON:0002193!1.59e-30!112;UBERON:0002371!1.06e-19!80;UBERON:0001474!6.60e-17!86;UBERON:0002405!8.36e-16!115;UBERON:0004765!1.37e-11!101;UBERON:0001434!1.37e-11!101;UBERON:0000178!9.11e-10!15;UBERON:0000179!9.11e-10!15;UBERON:0000463!9.11e-10!15;UBERON:0003081!1.54e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.67e-14;15!UBERON:0000179;1.67e-14;15!UBERON:0000463;1.67e-14;15!UBERON:0002390;2.73e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.90e-32,98;UBERON:0003061,1.90e-32,98;UBERON:0002193,6.59e-31,108;UBERON:0002405,4.16e-20,93;UBERON:0002371,1.71e-18,76;UBERON:0001474,1.95e-16,82;UBERON:0000178,2.40e-14,15;UBERON:0000179,2.40e-14,15;UBERON:0000463,2.40e-14,15;UBERON:0004765,3.87e-14,90;UBERON:0001434,8.25e-12,100;UBERON:0003081,4.21e-11,203;UBERON:0002384,2.56e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0.125542639594803,0.764134057479513,0.738905305049512,0.472264687882075,7.86728553697808,4.22212337906934,1.39334510984468,0,0,0,0.697204805222715,0.284338464974843,0.587200878669695,1.10799081706375,2.20598892217156,3.25516306073778,0.671746422719773,0.647787332037959,0.515151135268373,6.68831898385998,3.40088349319928,4.85168122375632,3.0215774797739,2.87817521615278,3.71647645074124,0.863077176966451,1.0246428261164,0,3.7922024881028,5.80936215225443,1.35426486594342,6.96496656307637,5.45812300115692,2.47195832889593,3.06083892370903,3.53021929783703,4.47535988059329,0.659702600373432,1.19678194572979,0.852449501065388,0.580418477257168,0,0.622822248995575,4.01997864410789,4.17186334736161,2.82345498116652,1.21079900526674,0.736555271975129,0,2.11255286311942,4.03948169933583,1.25795187305026,2.2465726229299,2.4028302854641,0.803627933485401,0.570025487482497,1.79025009479181,0.365328307529268,1.75996244461323,3.27683166757279,7.11607403090844,1.70692089026603,2.80277190925209,0.574752439954483,0,2.86216126360609,8.53819453664173,12.9192181661607,15.6732023531344,1.32171328579026,2.24203425192614,1.31692042387539,2.75393678159366,11.7903228824749,18.5041349099558,1.5046784585161,13.0368906653436,14.6768819777767,7.79306913631645,0.779873198196215,16.203324911116,13.2920336750173,3.5204502289452,1.79327847615945,1.8208308658383,0.164437904603676,0,0.289803085735052,8.00747441075126,6.42097987415311,7.31748666634838,0.113309342697566,3.44898444241729,12.3705880373747,6.32549230048757,0.637130828648193,0.651083453856419,0.950452044448374,0.602300476311091,0.76791966692651,2.49861453104692,1.4206635122641,0,4.23374160771938,8.29064606928873,9.26876184849914,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,1.0447784237956,0.398873881556595,6.91622810485492,3.43196946468077,5.94332002127304,0.39752481473341,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,1.8809546988313,0.516833518338658,0,1.00416183829401,0,0,0.488124115096339,0,0.81014194788176,0,0,0,0,0,1.46561395144326,34.2629085333764,38.7780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.964044119533928,0.330881918197182,0.217879444092406,0,0.404493924480493,0,0,0,0,0,0,0,0,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.672510863961164,3.15249216323084,9.27198571895924,5.00537841491019,0.254094624222463,1.30139853857622,0,0.335032530668698,1.27587750330633,23.9682247663098,71.798750208966,10.3603878359009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34212854858063,9.05999643438191,7.25747393063422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.753150406214233,0,0,0,0,2.02979043692868,0,1.70894156152249,1.19115887728894,1.23408681925858,2.59389324477087,1.08006287447623,1.58625035258854,0,0,0,1.11481905075431,0.721346064882224,0.995985806877798,0.478278818186467,0.399158742865633,0.5745161103971,0.211673582723883,0,0,0,0.47003968731907,0,0,1.2847046008296,0.403599414382095,0.851692475380653,0.343505344755765,0,0,0.333698283423817,0.586164286206121,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,1.65770349318689,0,0,0.246169610922139,0,0,0.179021174675609,0,1.87422470710174,9.57932369387759,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,0.593042257361244,1.11207545051853,0.313265848516366,0.067401132980677,0,0,1.64209310294099,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0.246346371159628,0.387956065953678,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0.279282401272254,0,0,0.399358000997982,0,0.223171457441873,0,0,0,0,0,0,0,0.169346664131569,0,0.272406812223151,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.747511887973863,0,0.414239055347196,3.47316215268366,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0,0,0,0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| ||
|short_description=p5@CXCR4 | |||
}} | }} |
Latest revision as of 02:54, 17 September 2015
Short description: | p5@CXCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CXCR4_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -20bp_to_AY826773_5end |
EntrezGene: | CXCR4 |
HGNC: | 2561 |
UniProt: | Q5MIL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.90e-32 | 98 |
blood island | 1.90e-32 | 98 |
hemolymphoid system | 6.59e-31 | 108 |
immune system | 4.16e-20 | 93 |
bone marrow | 1.71e-18 | 76 |
bone element | 1.95e-16 | 82 |
blood | 2.40e-14 | 15 |
haemolymphatic fluid | 2.40e-14 | 15 |
organism substance | 2.40e-14 | 15 |
skeletal element | 3.87e-14 | 90 |
skeletal system | 8.25e-12 | 100 |
lateral plate mesoderm | 4.21e-11 | 203 |
connective tissue | 2.56e-09 | 371 |