FFCP PHASE1:Hg19::chr7:150498426..150498465,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28959 | |EntrezGene=28959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29596 | |HGNC=29596 | ||
|TSSclassifier=strong | |||
|UniProt=Q3YBM2 | |UniProt=Q3YBM2 | ||
|association_with_transcript=0bp_to_ENST00000447204,ENST00000528038,NM_014020,uc003whw.3_5end | |association_with_transcript=0bp_to_ENST00000447204,ENST00000528038,NM_014020,uc003whw.3_5end | ||
|cluster_id=chr7:150498426..150498465,- | |||
|coexpression_cluster_id=C1988 | |coexpression_cluster_id=C1988 | ||
|description=CAGE_peak_3_at_TMEM176B_5end | |description=CAGE_peak_3_at_TMEM176B_5end | ||
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|ontology_enrichment_celltype=CL:0002057!3.09e-38!42;CL:0002194!8.80e-38!63;CL:0000576!8.80e-38!63;CL:0000040!8.80e-38!63;CL:0000559!8.80e-38!63;CL:0002009!3.72e-37!65;CL:0000860!1.88e-34!45;CL:0000557!3.48e-33!71;CL:0000839!7.45e-33!70;CL:0000766!7.49e-32!76;CL:0000763!5.62e-20!112;CL:0000049!5.62e-20!112;CL:0002087!1.87e-18!119;CL:0000738!7.64e-18!140;CL:0002031!1.49e-15!124;CL:0000037!2.41e-11!172;CL:0000566!2.41e-11!172;CL:0002032!6.16e-11!165;CL:0000837!6.16e-11!165;CL:0000988!1.43e-09!182;CL:0002393!7.36e-08!9;CL:0002397!7.36e-08!9 | |ontology_enrichment_celltype=CL:0002057!3.09e-38!42;CL:0002194!8.80e-38!63;CL:0000576!8.80e-38!63;CL:0000040!8.80e-38!63;CL:0000559!8.80e-38!63;CL:0002009!3.72e-37!65;CL:0000860!1.88e-34!45;CL:0000557!3.48e-33!71;CL:0000839!7.45e-33!70;CL:0000766!7.49e-32!76;CL:0000763!5.62e-20!112;CL:0000049!5.62e-20!112;CL:0002087!1.87e-18!119;CL:0000738!7.64e-18!140;CL:0002031!1.49e-15!124;CL:0000037!2.41e-11!172;CL:0000566!2.41e-11!172;CL:0002032!6.16e-11!165;CL:0000837!6.16e-11!165;CL:0000988!1.43e-09!182;CL:0002393!7.36e-08!9;CL:0002397!7.36e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.34e-38;39!CL:0000234;1.34e-38;39!CL:0000860;1.98e-38;33!CL:0002057;1.98e-38;33!CL:0000576;8.45e-32;48!CL:0000766;9.70e-20;69!CL:0000235;1.32e-09;6!CL:0000763;2.84e-09;100!CL:0002393;3.17e-08;6!CL:0002397;3.17e-08;6!CL:0002087;2.00e-07;104!CL:0000738;6.96e-07;136 | |ontology_enrichment_celltype_v019=CL:0000473;1.34e-38;39!CL:0000234;1.34e-38;39!CL:0000860;1.98e-38;33!CL:0002057;1.98e-38;33!CL:0000576;8.45e-32;48!CL:0000766;9.70e-20;69!CL:0000235;1.32e-09;6!CL:0000763;2.84e-09;100!CL:0002393;3.17e-08;6!CL:0002397;3.17e-08;6!CL:0002087;2.00e-07;104!CL:0000738;6.96e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.54e-56,48;CL:0000234,5.54e-56,48;CL:0002194,5.68e-53,59;CL:0000576,5.68e-53,59;CL:0000040,5.68e-53,59;CL:0000559,5.68e-53,59;CL:0002009,1.14e-50,61;CL:0000860,1.51e-47,42;CL:0002057,1.51e-47,42;CL:0000839,1.58e-45,66;CL:0000557,1.37e-44,67;CL:0000766,6.28e-42,72;CL:0000763,1.90e-27,108;CL:0000049,1.90e-27,108;CL:0002087,2.51e-22,115;CL:0000738,2.95e-20,136;CL:0002031,1.76e-18,120;CL:0000037,7.83e-14,168;CL:0002032,1.68e-13,161;CL:0000837,1.68e-13,161;CL:0000988,2.67e-12,177;CL:0000235,1.11e-09,6;CL:0002393,3.24e-07,9;CL:0002397,3.24e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.22e-34;42!CL:0000049;5.08e-09;108 | |ontology_enrichment_development_v019=CL:0002057;7.22e-34;42!CL:0000049;5.08e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.90e-44!115;UBERON:0002390!4.26e-29!102;UBERON:0003061!4.26e-29!102;UBERON:0002371!5.58e-27!80;UBERON:0002193!1.41e-26!112;UBERON:0002405!3.89e-24!115;UBERON:0001474!1.31e-23!86;UBERON:0004765!8.10e-18!101;UBERON:0001434!8.10e-18!101;UBERON:0001049!4.33e-14!57;UBERON:0005068!4.33e-14!57;UBERON:0006241!4.33e-14!57;UBERON:0007135!4.33e-14!57;UBERON:0000062!1.33e-13!511;UBERON:0003080!2.31e-12!42;UBERON:0002780!1.12e-11!41;UBERON:0001890!1.12e-11!41;UBERON:0006240!1.12e-11!41;UBERON:0000922!1.87e-11!612;UBERON:0002616!3.20e-11!59;UBERON:0000923!2.20e-10!604;UBERON:0005291!2.20e-10!604;UBERON:0006598!2.20e-10!604;UBERON:0002532!2.20e-10!604;UBERON:0000468!2.76e-10!659;UBERON:0002050!2.79e-10!605;UBERON:0005423!2.79e-10!605;UBERON:0000467!2.89e-10!625;UBERON:0000480!3.66e-10!626;UBERON:0002204!5.85e-10!167;UBERON:0003075!3.93e-09!86;UBERON:0007284!3.93e-09!86;UBERON:0000955!5.23e-09!69;UBERON:0006238!5.23e-09!69;UBERON:0002020!6.36e-09!34;UBERON:0003528!6.36e-09!34;UBERON:0001017!7.84e-09!82;UBERON:0003081!8.52e-09!216;UBERON:0002346!1.22e-08!90;UBERON:0005743!1.47e-08!86;UBERON:0001893!2.28e-08!34;UBERON:0002791!3.99e-08!33;UBERON:0001869!1.75e-07!32;UBERON:0000073!3.26e-07!94;UBERON:0001016!3.26e-07!94 | |ontology_enrichment_uberon=UBERON:0007023!2.90e-44!115;UBERON:0002390!4.26e-29!102;UBERON:0003061!4.26e-29!102;UBERON:0002371!5.58e-27!80;UBERON:0002193!1.41e-26!112;UBERON:0002405!3.89e-24!115;UBERON:0001474!1.31e-23!86;UBERON:0004765!8.10e-18!101;UBERON:0001434!8.10e-18!101;UBERON:0001049!4.33e-14!57;UBERON:0005068!4.33e-14!57;UBERON:0006241!4.33e-14!57;UBERON:0007135!4.33e-14!57;UBERON:0000062!1.33e-13!511;UBERON:0003080!2.31e-12!42;UBERON:0002780!1.12e-11!41;UBERON:0001890!1.12e-11!41;UBERON:0006240!1.12e-11!41;UBERON:0000922!1.87e-11!612;UBERON:0002616!3.20e-11!59;UBERON:0000923!2.20e-10!604;UBERON:0005291!2.20e-10!604;UBERON:0006598!2.20e-10!604;UBERON:0002532!2.20e-10!604;UBERON:0000468!2.76e-10!659;UBERON:0002050!2.79e-10!605;UBERON:0005423!2.79e-10!605;UBERON:0000467!2.89e-10!625;UBERON:0000480!3.66e-10!626;UBERON:0002204!5.85e-10!167;UBERON:0003075!3.93e-09!86;UBERON:0007284!3.93e-09!86;UBERON:0000955!5.23e-09!69;UBERON:0006238!5.23e-09!69;UBERON:0002020!6.36e-09!34;UBERON:0003528!6.36e-09!34;UBERON:0001017!7.84e-09!82;UBERON:0003081!8.52e-09!216;UBERON:0002346!1.22e-08!90;UBERON:0005743!1.47e-08!86;UBERON:0001893!2.28e-08!34;UBERON:0002791!3.99e-08!33;UBERON:0001869!1.75e-07!32;UBERON:0000073!3.26e-07!94;UBERON:0001016!3.26e-07!94 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.89e-38,98;UBERON:0003061,3.89e-38,98;UBERON:0002371,2.77e-37,76;UBERON:0002405,1.59e-36,93;UBERON:0002193,8.25e-36,108;UBERON:0001474,2.57e-33,82;UBERON:0004765,7.21e-29,90;UBERON:0001434,2.44e-24,100;UBERON:0007023,6.85e-20,114;UBERON:0003081,1.53e-16,203;UBERON:0002204,1.22e-11,167;UBERON:0000923,5.85e-11,560;UBERON:0010316,5.85e-11,560;UBERON:0005291,5.85e-11,560;UBERON:0006598,5.85e-11,560;UBERON:0010317,5.85e-11,560;UBERON:0002532,5.85e-11,560;UBERON:0002050,1.20e-10,564;UBERON:0005423,2.18e-10,581;UBERON:0000926,2.48e-10,315;UBERON:0004120,2.48e-10,315;UBERON:0006603,2.48e-10,315;UBERON:0000922,5.02e-10,592 | |||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,1.66198622559563,4.41197784434312,23.6541849080278,6.71746422719773,19.4336199611388,108.954465109261,12.5042485350426,5.29026321164333,20.6196452009644,13.4808841405297,4.11167888021826,15.7950249156503,12.0830804775303,10.246428261164,19.1550606209754,12.4108445065183,4.51839278508678,14.8969135253776,9.97684399575805,5.18521685109907,11.9103446755895,11.3251040177234,5.77672248736969,13.4260796417799,25.7284014145639,11.369428484433,36.6553285458117,14.2202526928006,6.80862269629368,18.6846674698673,21.1048878815664,12.5155900420848,15.2032191293582,12.1079900526674,8.47038562771399,12.3420331101945,3.59133986730301,31.8906449947565,1.25795187305026,4.4931452458598,34.8410391392295,0.64290234678832,0.855038231223746,20.0905843971081,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,0,0,0,1.12101712596307,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1434978119451,0,0,1.9472843619281,2.61194605948901,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,48.1669132322957,120.887747651348,31.3118650541144,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,13.1042388477973,112.959683339433,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5948536769429,21.5970549315814,73.7918788190611,0,0,0,0,0,0,0,0,0,1.28343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,5.60856922128404,32.0182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.128429257954,0,0,0,0,0,0,0,0.307007349452259,0.964856007391714,2.36324538710202,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47540847299933,1.64722217841633,0.353437207037059,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,2.01090682660736,0,12.5211255033116,0,0,0,0,0,0,0.569647187174163,1.42939065274673,2.05681136543097,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619736471943,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0.307160702099232,0,1.26602474769461,0,0,0,1.59398390600856,3.86797481743607,0,0,0,0,0,0,0,1.57829449019094,4.7896618469388,0,0.969332746095218,0.834912883456661,0,0,0,6.52499617891314,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0.110579259931225,0,0.438770794307945,0,0,1.38510465306835,0.113942055847001,0,0,0,0.31900115973192,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,2.91909962861019,3.05515072466813,0,0,0,0.471807930864739,0.802577647298789,0.468528891450678,0,0,0,0.394584402849391,2.41981432097328,0,5.68679216656392,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.84279131327997,0,1.58186518546373,0,0,0.0633107959558787,0,0,2.13452994739353,0,0.144090417154106,0,3.43189995723929,0,0,0,0,0,0,0,2.40168115483916,4.38097212454378,0,0,0,2.51354161145029,1.14580212005842,3.58936512288407,0,0.858452096273142,1.33902874465124,1.81395375714161,0,0,0,0,0,0,0,2.38568906942791,0.953423842781029,0,0,0,0.2249738915515,0,0.182248669974074,0,5.67401092554227,2.51782023047991,0,0,0,12.8645158747206,1.98627591109629,0,0,0,0,0,0,0,0,59.3536546396234,13.2506888912221,2.97350799631566,2.77688463659649,0,0,2.56289790162467,0.943225830597996,2.89967338743037,10.9156524798629,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0.886068179966986,0.732157589411779,1.1267183763585,1.72022758707021,2.21858103073705,1.61450647647597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,19.4860308839388,7.30756621723497,43.8355256605662,0,0,0,0,0,0,0,0,0,0,0,2.26432103933032,0,0,0,0,0,0,0,0,0,0,3.062454773532,0.321146125482298,0,0.798169295285756,0.205116364240755,0,0.553258019713743,0.484426936895553,0,0,0,0,0,0,0,0,2.1058891937792,0,0,0,0,0.443568258651136,0.0675375846183947,0.781078098613847,0.826747186004736,0.253663240775627,0,1.09651553371436,0.496211178389294,0.175871244359621,0,2.14280734351315,1.00885116665647,1.82089681270989,0.91064876540519,1.41923792260222,0,0,0.40781839786099,0.131545547125698,0,0,1.0989032999072,0.628462359664008,0,0,0,0,4.57449882730601,0,0,0,3.20684545892101,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.410651227424988,1.1598144313382,0.485710993059139,18.0133386865821,0,0,0,0,0,7.9489382851183,3.49695296806332,18.8126918544609,0.9805932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| ||
|short_description=p3@TMEM176B | |short_description=p3@TMEM176B | ||
}} | }} |
Latest revision as of 04:04, 17 September 2015
Short description: | p3@TMEM176B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM176B_5end |
Coexpression cluster: | C1988_Macrophage_CD14_Hepatocyte_Monocytederived_liver_migratory_CD14CD16 |
Association with transcript: | 0bp_to_ENST00000447204, ENST00000528038, NM_014020, uc003whw.3_5end |
EntrezGene: | TMEM176B |
HGNC: | 29596 |
UniProt: | Q3YBM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.54e-56 | 48 |
phagocyte | 5.54e-56 | 48 |
monopoietic cell | 5.68e-53 | 59 |
monocyte | 5.68e-53 | 59 |
monoblast | 5.68e-53 | 59 |
promonocyte | 5.68e-53 | 59 |
macrophage dendritic cell progenitor | 1.14e-50 | 61 |
classical monocyte | 1.51e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-47 | 42 |
myeloid lineage restricted progenitor cell | 1.58e-45 | 66 |
granulocyte monocyte progenitor cell | 1.37e-44 | 67 |
myeloid leukocyte | 6.28e-42 | 72 |
myeloid cell | 1.90e-27 | 108 |
common myeloid progenitor | 1.90e-27 | 108 |
nongranular leukocyte | 2.51e-22 | 115 |
leukocyte | 2.95e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 1.76e-18 | 120 |
hematopoietic stem cell | 7.83e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.68e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-13 | 161 |
hematopoietic cell | 2.67e-12 | 177 |
macrophage | 1.11e-09 | 6 |
intermediate monocyte | 3.24e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.24e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.89e-38 | 98 |
blood island | 3.89e-38 | 98 |
bone marrow | 2.77e-37 | 76 |
immune system | 1.59e-36 | 93 |
hemolymphoid system | 8.25e-36 | 108 |
bone element | 2.57e-33 | 82 |
skeletal element | 7.21e-29 | 90 |
skeletal system | 2.44e-24 | 100 |
adult organism | 6.85e-20 | 114 |
lateral plate mesoderm | 1.53e-16 | 203 |
musculoskeletal system | 1.22e-11 | 167 |
germ layer | 5.85e-11 | 560 |
germ layer / neural crest | 5.85e-11 | 560 |
embryonic tissue | 5.85e-11 | 560 |
presumptive structure | 5.85e-11 | 560 |
germ layer / neural crest derived structure | 5.85e-11 | 560 |
epiblast (generic) | 5.85e-11 | 560 |
embryonic structure | 1.20e-10 | 564 |
developing anatomical structure | 2.18e-10 | 581 |
mesoderm | 2.48e-10 | 315 |
mesoderm-derived structure | 2.48e-10 | 315 |
presumptive mesoderm | 2.48e-10 | 315 |
embryo | 5.02e-10 | 592 |