FFCP PHASE1:Hg19::chr1:26394114..26394130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84676 | |EntrezGene=84676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16007 | |HGNC=16007 | ||
|TSSclassifier=strong | |||
|UniProt=Q969Q1 | |UniProt=Q969Q1 | ||
|association_with_transcript=0bp_to_ENST00000374272,NM_032588,uc001bli.1_5end | |association_with_transcript=0bp_to_ENST00000374272,NM_032588,uc001bli.1_5end | ||
|cluster_id=chr1:26394114..26394130,- | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_1_at_TRIM63_5end | |description=CAGE_peak_1_at_TRIM63_5end | ||
|id=chr1:26394114..26394130,- | |id=chr1:26394114..26394130,- | ||
|ontology_enrichment_celltype=CL:0000147!1.03e-13!14;CL:0000148!1.21e-11!10;CL:0000541!1.21e-11!10;CL:0002274!2.55e-08!5;CL:0000457!2.55e-08!5;CL:0002191!2.55e-08!5;CL:0000097!2.55e-08!5;CL:0000831!2.55e-08!5;CL:0002028!2.55e-08!5 | |ontology_enrichment_celltype=CL:0000147!1.03e-13!14;CL:0000148!1.21e-11!10;CL:0000541!1.21e-11!10;CL:0002274!2.55e-08!5;CL:0000457!2.55e-08!5;CL:0002191!2.55e-08!5;CL:0000097!2.55e-08!5;CL:0000831!2.55e-08!5;CL:0002028!2.55e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000147;1.15e-19;14!CL:0000097;3.08e-15;5!CL:0000148;8.27e-15;10!CL:0000149;2.69e-11;4!CL:0002567;3.05e-10;3!CL:0002586;1.63e-08;3!CL:0000163;2.76e-08;9!CL:0000710;8.21e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,9.41e-20,14;CL:0000097,3.08e-15,5;CL:0002028,3.08e-15,5;CL:0000148,8.27e-15,10;CL:0000541,8.27e-15,10;CL:0000149,2.07e-11,4;CL:0002567,3.05e-10,3;CL:0002586,1.24e-08,3;CL:0000163,2.77e-08,9;CL:0000710,8.22e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.83e-08;65!UBERON:0005062;1.29e-07;4!UBERON:0007284;1.29e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.50e-07;2!DOID:1909;5.73e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.50e-07,2;DOID:1909,5.73e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-24!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.38e-12;25!UBERON:0004151;3.44e-10;3!UBERON:0003978;4.79e-10;3!UBERON:0000946;4.79e-10;3!UBERON:0000966;6.00e-09;5!UBERON:0005388;6.00e-09;5!UBERON:0001802;6.00e-09;5!UBERON:0001781;1.63e-08;3!UBERON:0001782;1.63e-08;3!UBERON:0000948;1.75e-07;22!UBERON:0005090;2.74e-07;2!UBERON:0001630;2.74e-07;2!UBERON:0002081;2.87e-07;2!UBERON:0002133;3.88e-07;2!UBERON:0000341;4.94e-07;2!UBERON:0003127;9.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.44e-15,114;UBERON:0007100,1.80e-11,27;UBERON:0004151,3.44e-10,3;UBERON:0003978,4.80e-10,3;UBERON:0009751,4.80e-10,3;UBERON:0000946,4.80e-10,3;UBERON:0002523,4.80e-10,3;UBERON:0005983,4.80e-10,3;UBERON:0002165,4.80e-10,3;UBERON:0002062,4.80e-10,3;UBERON:0007280,4.80e-10,3;UBERON:0001782,1.24e-08,3;UBERON:0005424,1.24e-08,3;UBERON:0003103,1.37e-08,68;UBERON:0000966,1.53e-07,6;UBERON:0005388,1.53e-07,6;UBERON:0001802,1.53e-07,6;UBERON:0005090,2.78e-07,2;UBERON:0001630,2.78e-07,2;UBERON:0002081,2.87e-07,2;UBERON:0010227,2.87e-07,2;UBERON:0002133,3.88e-07,2;UBERON:0000341,4.94e-07,2;UBERON:0000948,9.51e-07,24;UBERON:0005498,9.51e-07,24;UBERON:0004140,9.51e-07,24;UBERON:0009881,9.51e-07,24;UBERON:0004141,9.51e-07,24;UBERON:0003084,9.51e-07,24;UBERON:0007005,9.51e-07,24;UBERON:0004139,9.51e-07,24;UBERON:0004291,9.51e-07,24;UBERON:0003127,9.71e-07,2 | |||
|phase1_expression=1.63510541343501,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,2.62129646556207,2.90143676051299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,1.55605517699883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.829288440122964,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,80.6523655561151,35.0384515263905,143.399353649877,34.211699458549,134.107552745061,73.7237661327476,168.793123982468,63.2968050284009,68.5859376331168,68.4782171884132,138.911646258461,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,2.0694614258501,0,0,0,0,0.686286847621712,0,0,0,0.303127571446259,8.32177197552485,0.907170879989041,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33385162651306,1.96808787419823,1.95227036798582,0.9273691048295,0,0,0,0,0,0.580024309752732,0,0,0.827019434907183,0,0,0.340906509664404,6.32127453091835,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0,0,0,0,0,1.07923474549989,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5367023529684,0,0,0,0,0.593929361665277,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,0,0,3.15658898038188,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,18.4592858878721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86270007089136,0,0,0,0.0821154570532092,5.14041787388623,0,9.7171718535629,0,0,0.253243183823515,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,47.198725815011,92.3516508767085,44.5081275237625,89.05683422255,188.430235131955,128.76993094396,270.68221064902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.262272940674991,0,0,0,88.6222204702975,121.162830576874,0,0.542999601753713,6.91377192961014,0.979762080328227,0,0.492555124496034,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0,0.248385611765534,0,0,20.6242799856641,31.4011866899464,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0.974301544196942,0.132864840313363,0.490696182767533,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,58.0567078715474,0,0,0,0,0,0,0.79832133146375,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,3.53218917827313,0,1.40136081656895,0,0,0,25.588602815243,0,0,0.347716544605159,0,0,0,0,0.430227358820278,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,411.764740451501,1773.70531405538,18.5570309014112,6.31424290976881,0,0,0,0,0,0,0.308696632431779,0,0,5.88355972209373,0,0,0.891139200981258,0,0,0,0,0,0,0,0,0,4.12856355064087,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,2.94063678511504,0,0.909344378618873,0,0,0,66.1025343893041,10.9509638473321,0,0.372448285775147,0.112131862580613,9.6107209000029,3.63810940124795,83.1677976966392,79.0558925506999,4.98405192307948,4.15988791277523,21.2902628189449,0,0,0,0,39.8889602085872,1.1001729976458,0.406896178315738,1.33151354837103,4.6292972525936,0 | |phase1_expression=1.63510541343501,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,2.62129646556207,2.90143676051299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,1.55605517699883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0.829288440122964,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,80.6523655561151,35.0384515263905,143.399353649877,34.211699458549,134.107552745061,73.7237661327476,168.793123982468,63.2968050284009,68.5859376331168,68.4782171884132,138.911646258461,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,2.0694614258501,0,0,0,0,0.686286847621712,0,0,0,0.303127571446259,8.32177197552485,0.907170879989041,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33385162651306,1.96808787419823,1.95227036798582,0.9273691048295,0,0,0,0,0,0.580024309752732,0,0,0.827019434907183,0,0,0.340906509664404,6.32127453091835,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0,0,0,0,0,1.07923474549989,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5367023529684,0,0,0,0,0.593929361665277,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,0,0,3.15658898038188,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,18.4592858878721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86270007089136,0,0,0,0.0821154570532092,5.14041787388623,0,9.7171718535629,0,0,0.253243183823515,0,0,2.77488893161158,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,47.198725815011,92.3516508767085,44.5081275237625,89.05683422255,188.430235131955,128.76993094396,270.68221064902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.262272940674991,0,0,0,88.6222204702975,121.162830576874,0,0.542999601753713,6.91377192961014,0.979762080328227,0,0.492555124496034,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0,0.248385611765534,0,0,20.6242799856641,31.4011866899464,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0.974301544196942,0.132864840313363,0.490696182767533,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,58.0567078715474,0,0,0,0,0,0,0.79832133146375,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,3.53218917827313,0,1.40136081656895,0,0,0,25.588602815243,0,0,0.347716544605159,0,0,0,0,0.430227358820278,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,411.764740451501,1773.70531405538,18.5570309014112,6.31424290976881,0,0,0,0,0,0,0.308696632431779,0,0,5.88355972209373,0,0,0.891139200981258,0,0,0,0,0,0,0,0,0,4.12856355064087,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,2.94063678511504,0,0.909344378618873,0,0,0,66.1025343893041,10.9509638473321,0,0.372448285775147,0.112131862580613,9.6107209000029,3.63810940124795,83.1677976966392,79.0558925506999,4.98405192307948,4.15988791277523,21.2902628189449,0,0,0,0,39.8889602085872,1.1001729976458,0.406896178315738,1.33151354837103,4.6292972525936,0 | ||
|short_description=p1@TRIM63 | |short_description=p1@TRIM63 | ||
}} | }} |
Latest revision as of 04:43, 17 September 2015
Short description: | p1@TRIM63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM63_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 0bp_to_ENST00000374272, NM_032588, uc001bli.1_5end |
EntrezGene: | TRIM63 |
HGNC: | 16007 |
UniProt: | Q969Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 9.41e-20 | 14 |
mast cell | 3.08e-15 | 5 |
basophil mast progenitor cell | 3.08e-15 | 5 |
melanocyte | 8.27e-15 | 10 |
melanoblast | 8.27e-15 | 10 |
visual pigment cell | 2.07e-11 | 4 |
light melanocyte | 3.05e-10 | 3 |
retinal pigment epithelial cell | 1.24e-08 | 3 |
endocrine cell | 2.77e-08 | 9 |
neurecto-epithelial cell | 8.22e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.44e-15 | 114 |
primary circulatory organ | 1.80e-11 | 27 |
cardiac chamber | 3.44e-10 | 3 |
valve | 4.80e-10 | 3 |
cardiac mesenchyme | 4.80e-10 | 3 |
cardial valve | 4.80e-10 | 3 |
tunica intima | 4.80e-10 | 3 |
heart layer | 4.80e-10 | 3 |
endocardium | 4.80e-10 | 3 |
endocardial cushion | 4.80e-10 | 3 |
presumptive endocardium | 4.80e-10 | 3 |
pigmented layer of retina | 1.24e-08 | 3 |
presumptive retinal pigmented epithelium | 1.24e-08 | 3 |
compound organ | 1.37e-08 | 68 |
retina | 1.53e-07 | 6 |
photoreceptor array | 1.53e-07 | 6 |
posterior segment of eyeball | 1.53e-07 | 6 |
muscle structure | 2.78e-07 | 2 |
muscle organ | 2.78e-07 | 2 |
cardiac atrium | 2.87e-07 | 2 |
future cardiac atrium | 2.87e-07 | 2 |
atrioventricular valve | 3.88e-07 | 2 |
throat | 4.94e-07 | 2 |
heart | 9.51e-07 | 24 |
primitive heart tube | 9.51e-07 | 24 |
primary heart field | 9.51e-07 | 24 |
anterior lateral plate mesoderm | 9.51e-07 | 24 |
heart tube | 9.51e-07 | 24 |
heart primordium | 9.51e-07 | 24 |
cardiac mesoderm | 9.51e-07 | 24 |
cardiogenic plate | 9.51e-07 | 24 |
heart rudiment | 9.51e-07 | 24 |
open tracheal system trachea | 9.71e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.50e-07 | 2 |
melanoma | 5.73e-07 | 2 |