FFCP PHASE1:Hg19::chr4:2043785..2043790,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401115 | |EntrezGene=401115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34437 | |HGNC=34437 | ||
|TSSclassifier=strong | |||
|UniProt=Q5BLP8 | |UniProt=Q5BLP8 | ||
|association_with_transcript=8bp_to_ENST00000409860,NM_001141936,uc003gep.3_5end | |association_with_transcript=8bp_to_ENST00000409860,NM_001141936,uc003gep.3_5end | ||
|cluster_id=chr4:2043785..2043790,+ | |||
|description=CAGE_peak_3_at_C4orf48_5end | |description=CAGE_peak_3_at_C4orf48_5end | ||
|id=chr4:2043785..2043790,+ | |id=chr4:2043785..2043790,+ | ||
|ontology_enrichment_celltype=CL:0000220!4.60e-12!246;CL:0002321!5.58e-12!248;CL:0000222!9.06e-09!119;CL:0002139!1.65e-08!24;CL:0000071!5.18e-08!18;CL:0002546!5.18e-08!18 | |ontology_enrichment_celltype=CL:0000220!4.60e-12!246;CL:0002321!5.58e-12!248;CL:0000222!9.06e-09!119;CL:0002139!1.65e-08!24;CL:0000071!5.18e-08!18;CL:0002546!5.18e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.54e-10;6!CL:0000404;2.54e-10;6!CL:0002543;6.65e-10;6!CL:0002144;1.66e-09;3!CL:0000071;1.44e-08;18!CL:0002594;3.82e-07;4!CL:0002078;4.54e-07;45 | |ontology_enrichment_celltype_v019=CL:0000540;2.54e-10;6!CL:0000404;2.54e-10;6!CL:0002543;6.65e-10;6!CL:0002144;1.66e-09;3!CL:0000071;1.44e-08;18!CL:0002594;3.82e-07;4!CL:0002078;4.54e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.88e-13,8;CL:0000540,1.92e-10,6;CL:0000031,1.92e-10,6;CL:0000404,1.92e-10,6;CL:0002543,3.27e-10,6;CL:0002144,2.14e-09,3;CL:0000071,1.09e-08,18;CL:0002546,1.09e-08,18;CL:0002078,6.22e-08,45;CL:0000115,7.47e-08,36;CL:0000222,1.95e-07,121;CL:0002594,2.80e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000031;2.54e-10;6!CL:0002546;1.44e-08;18!UBERON:0005425;4.26e-08;1 | |ontology_enrichment_development_v019=CL:0000031;2.54e-10;6!CL:0002546;1.44e-08;18!UBERON:0005425;4.26e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.16e-16!94;UBERON:0001016!8.16e-16!94;UBERON:0005743!2.40e-14!86;UBERON:0001017!7.99e-14!82;UBERON:0000025!1.09e-12!194;UBERON:0004111!9.98e-11!241;UBERON:0001049!2.36e-10!57;UBERON:0005068!2.36e-10!57;UBERON:0006241!2.36e-10!57;UBERON:0007135!2.36e-10!57;UBERON:0000955!2.53e-10!69;UBERON:0006238!2.53e-10!69;UBERON:0002616!5.92e-10!59;UBERON:0000477!8.19e-10!286;UBERON:0002020!7.25e-09!34;UBERON:0003528!7.25e-09!34;UBERON:0002346!8.33e-09!90;UBERON:0001893!1.20e-08!34;UBERON:0003075!1.58e-08!86;UBERON:0007284!1.58e-08!86;UBERON:0002791!4.16e-08!33;UBERON:0001986!5.18e-08!18;UBERON:0004638!5.18e-08!18;UBERON:0004852!5.18e-08!18;UBERON:0001869!7.25e-08!32;UBERON:0000483!1.22e-07!309;UBERON:0002780!1.33e-07!41;UBERON:0001890!1.33e-07!41;UBERON:0006240!1.33e-07!41;UBERON:0000119!1.97e-07!312;UBERON:0001950!2.39e-07!20;UBERON:0000033!2.46e-07!123;UBERON:0002049!2.56e-07!79;UBERON:0007798!2.56e-07!79;UBERON:0003080!3.39e-07!42;UBERON:0000487!3.51e-07!22;UBERON:0002619!5.10e-07!22;UBERON:0000956!5.18e-07!25;UBERON:0000203!5.18e-07!25;UBERON:0001981!6.41e-07!60;UBERON:0007500!6.41e-07!60;UBERON:0004537!6.41e-07!60;UBERON:0006965!6.41e-07!60;UBERON:0000055!8.12e-07!69 | |ontology_enrichment_uberon=UBERON:0000073!8.16e-16!94;UBERON:0001016!8.16e-16!94;UBERON:0005743!2.40e-14!86;UBERON:0001017!7.99e-14!82;UBERON:0000025!1.09e-12!194;UBERON:0004111!9.98e-11!241;UBERON:0001049!2.36e-10!57;UBERON:0005068!2.36e-10!57;UBERON:0006241!2.36e-10!57;UBERON:0007135!2.36e-10!57;UBERON:0000955!2.53e-10!69;UBERON:0006238!2.53e-10!69;UBERON:0002616!5.92e-10!59;UBERON:0000477!8.19e-10!286;UBERON:0002020!7.25e-09!34;UBERON:0003528!7.25e-09!34;UBERON:0002346!8.33e-09!90;UBERON:0001893!1.20e-08!34;UBERON:0003075!1.58e-08!86;UBERON:0007284!1.58e-08!86;UBERON:0002791!4.16e-08!33;UBERON:0001986!5.18e-08!18;UBERON:0004638!5.18e-08!18;UBERON:0004852!5.18e-08!18;UBERON:0001869!7.25e-08!32;UBERON:0000483!1.22e-07!309;UBERON:0002780!1.33e-07!41;UBERON:0001890!1.33e-07!41;UBERON:0006240!1.33e-07!41;UBERON:0000119!1.97e-07!312;UBERON:0001950!2.39e-07!20;UBERON:0000033!2.46e-07!123;UBERON:0002049!2.56e-07!79;UBERON:0007798!2.56e-07!79;UBERON:0003080!3.39e-07!42;UBERON:0000487!3.51e-07!22;UBERON:0002619!5.10e-07!22;UBERON:0000956!5.18e-07!25;UBERON:0000203!5.18e-07!25;UBERON:0001981!6.41e-07!60;UBERON:0007500!6.41e-07!60;UBERON:0004537!6.41e-07!60;UBERON:0006965!6.41e-07!60;UBERON:0000055!8.12e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.74e-10;20!UBERON:0010523;1.66e-09;3!UBERON:0001915;1.66e-09;3!UBERON:0001982;1.66e-09;3!UBERON:0002619;3.18e-09;22!UBERON:0004638;1.44e-08;18!UBERON:0001986;1.44e-08;18!UBERON:0004852;1.44e-08;18!UBERON:0000956;4.26e-08;25!UBERON:0000203;4.26e-08;25!UBERON:0000941;4.26e-08;1!UBERON:0001785;4.26e-08;1!UBERON:0002464;4.26e-08;1!UBERON:0004904;4.26e-08;1!UBERON:0001021;4.26e-08;1!UBERON:0001310;3.82e-07;4!UBERON:0000487;5.77e-07;22!UBERON:0001638;9.43e-07;9!UBERON:0003920;9.43e-07;9!UBERON:0004582;9.43e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001950;3.74e-10;20!UBERON:0010523;1.66e-09;3!UBERON:0001915;1.66e-09;3!UBERON:0001982;1.66e-09;3!UBERON:0002619;3.18e-09;22!UBERON:0004638;1.44e-08;18!UBERON:0001986;1.44e-08;18!UBERON:0004852;1.44e-08;18!UBERON:0000956;4.26e-08;25!UBERON:0000203;4.26e-08;25!UBERON:0000941;4.26e-08;1!UBERON:0001785;4.26e-08;1!UBERON:0002464;4.26e-08;1!UBERON:0004904;4.26e-08;1!UBERON:0001021;4.26e-08;1!UBERON:0001310;3.82e-07;4!UBERON:0000487;5.77e-07;22!UBERON:0001638;9.43e-07;9!UBERON:0003920;9.43e-07;9!UBERON:0004582;9.43e-07;9 | ||
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| ||
|short_description=p3@C4orf48 | |short_description=p3@C4orf48 | ||
}} | }} |
Latest revision as of 07:30, 17 September 2015
Short description: | p3@C4orf48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C4orf48_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000409860, NM_001141936, uc003gep.3_5end |
EntrezGene: | C4orf48 |
HGNC: | 34437 |
UniProt: | Q5BLP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.88e-13 | 8 |
neuron | 1.92e-10 | 6 |
neuroblast | 1.92e-10 | 6 |
electrically signaling cell | 1.92e-10 | 6 |
vein endothelial cell | 3.27e-10 | 6 |
capillary endothelial cell | 2.14e-09 | 3 |
blood vessel endothelial cell | 1.09e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.09e-08 | 18 |
meso-epithelial cell | 6.22e-08 | 45 |
endothelial cell | 7.47e-08 | 36 |
mesodermal cell | 1.95e-07 | 121 |
smooth muscle cell of the umbilical artery | 2.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tube | 4.38e-10 | 192 |
neocortex | 4.91e-10 | 20 |
microcirculatory vessel | 2.14e-09 | 3 |
endothelium of capillary | 2.14e-09 | 3 |
capillary | 2.14e-09 | 3 |
regional part of cerebral cortex | 4.07e-09 | 22 |
nervous system | 5.46e-09 | 89 |
blood vessel endothelium | 1.09e-08 | 18 |
endothelium | 1.09e-08 | 18 |
cardiovascular system endothelium | 1.09e-08 | 18 |
central nervous system | 1.48e-08 | 81 |
cranial nerve II | 4.28e-08 | 1 |
cranial nerve | 4.28e-08 | 1 |
nerve trunk | 4.28e-08 | 1 |
nerve connecting eye with brain | 4.28e-08 | 1 |
nerve | 4.28e-08 | 1 |
retinal neural layer | 4.28e-08 | 1 |
presumptive neural retina | 4.28e-08 | 1 |
cerebral cortex | 5.28e-08 | 25 |
pallium | 5.28e-08 | 25 |
epithelial tube | 8.05e-08 | 117 |
umbilical artery | 2.80e-07 | 4 |
anatomical conduit | 3.08e-07 | 240 |
epithelial tube open at both ends | 3.27e-07 | 59 |
blood vessel | 3.27e-07 | 59 |
blood vasculature | 3.27e-07 | 59 |
vascular cord | 3.27e-07 | 59 |
splanchnic layer of lateral plate mesoderm | 3.35e-07 | 83 |
simple squamous epithelium | 4.62e-07 | 22 |
vein | 5.94e-07 | 9 |
venous blood vessel | 5.94e-07 | 9 |
venous system | 5.94e-07 | 9 |