FFCP PHASE1:Hg19::chr9:36400736..36400797,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152006 | |EntrezGene=152006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18052 | |HGNC=18052 | ||
|TSSclassifier=strong | |||
|UniProt=B1AM81 | |UniProt=B1AM81 | ||
|association_with_transcript=73bp_to_ENST00000377877_5end | |association_with_transcript=73bp_to_ENST00000377877_5end | ||
|cluster_id=chr9:36400736..36400797,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_6_at_RNF38_5end | |description=CAGE_peak_6_at_RNF38_5end | ||
|id=chr9:36400736..36400797,- | |id=chr9:36400736..36400797,- | ||
|ontology_enrichment_celltype=CL:0000037!4.46e-30!172;CL:0000566!4.46e-30!172;CL:0000988!6.61e-30!182;CL:0000738!5.57e-27!140;CL:0002032!2.06e-26!165;CL:0000837!2.06e-26!165;CL:0002031!7.10e-21!124;CL:0002087!1.41e-19!119;CL:0000838!1.50e-16!52;CL:0000542!3.87e-16!53;CL:0000051!3.87e-16!53;CL:0000763!1.60e-11!112;CL:0000049!1.60e-11!112;CL:0000766!3.03e-09!76;CL:0000236!7.16e-09!14;CL:0000945!2.14e-08!24;CL:0000826!2.14e-08!24;CL:0000084!1.08e-07!25;CL:0000827!1.08e-07!25;CL:0000860!2.51e-07!45;CL:0002057!3.56e-07!42;CL:0000557!7.73e-07!71;CL:0000791!9.17e-07!18;CL:0000789!9.17e-07!18;CL:0002420!9.17e-07!18;CL:0002419!9.17e-07!18;CL:0000790!9.17e-07!18 | |ontology_enrichment_celltype=CL:0000037!4.46e-30!172;CL:0000566!4.46e-30!172;CL:0000988!6.61e-30!182;CL:0000738!5.57e-27!140;CL:0002032!2.06e-26!165;CL:0000837!2.06e-26!165;CL:0002031!7.10e-21!124;CL:0002087!1.41e-19!119;CL:0000838!1.50e-16!52;CL:0000542!3.87e-16!53;CL:0000051!3.87e-16!53;CL:0000763!1.60e-11!112;CL:0000049!1.60e-11!112;CL:0000766!3.03e-09!76;CL:0000236!7.16e-09!14;CL:0000945!2.14e-08!24;CL:0000826!2.14e-08!24;CL:0000084!1.08e-07!25;CL:0000827!1.08e-07!25;CL:0000860!2.51e-07!45;CL:0002057!3.56e-07!42;CL:0000557!7.73e-07!71;CL:0000791!9.17e-07!18;CL:0000789!9.17e-07!18;CL:0002420!9.17e-07!18;CL:0002419!9.17e-07!18;CL:0000790!9.17e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.62e-14;53!CL:0000236;1.04e-13;13!CL:0000094;5.67e-13;8!CL:0000081;2.37e-11;11!CL:0000084;1.34e-10;25!CL:0000624;4.94e-10;6!CL:0000945;1.06e-09;24!CL:0000791;6.01e-09;18!CL:0000789;6.01e-09;18!CL:0002419;6.01e-09;18!CL:0000988;5.47e-08;177!CL:0000738;6.88e-08;136!CL:0002087;1.88e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.75e-41,177;CL:0000037,2.28e-39,168;CL:0000738,3.04e-38,136;CL:0002032,1.37e-32,161;CL:0000837,1.37e-32,161;CL:0002031,6.56e-25,120;CL:0002087,1.81e-24,115;CL:0000838,7.80e-23,52;CL:0000542,3.35e-22,53;CL:0000051,3.35e-22,53;CL:0000236,6.18e-15,14;CL:0000094,4.51e-13,8;CL:0000763,1.48e-12,108;CL:0000049,1.48e-12,108;CL:0000134,1.64e-12,354;CL:0000766,7.64e-12,72;CL:0002320,8.25e-12,361;CL:0000081,1.95e-11,11;CL:0000084,1.10e-10,25;CL:0000827,1.10e-10,25;CL:0000624,3.55e-10,6;CL:0000945,8.02e-10,24;CL:0000826,8.02e-10,24;CL:0000219,8.42e-10,386;CL:0000791,5.51e-09,18;CL:0000789,5.51e-09,18;CL:0002420,5.51e-09,18;CL:0002419,5.51e-09,18;CL:0000790,5.51e-09,18;CL:0000034,8.12e-09,441;CL:0000723,5.54e-08,433;CL:0000048,1.14e-07,427;CL:0000557,3.65e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000051;3.62e-14;53!CL:0000790;6.01e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.80e-10!102;UBERON:0003061!2.80e-10!102;UBERON:0002193!1.39e-09!112 | |ontology_enrichment_uberon=UBERON:0002390!2.80e-10!102;UBERON:0003061!2.80e-10!102;UBERON:0002193!1.39e-09!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.48e-10;15!UBERON:0000179;3.48e-10;15!UBERON:0000463;3.48e-10;15!UBERON:0002390;7.25e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.90e-14,98;UBERON:0003061,8.90e-14,98;UBERON:0002193,1.84e-11,108;UBERON:0002384,2.10e-11,371;UBERON:0000178,4.26e-10,15;UBERON:0000179,4.26e-10,15;UBERON:0000463,4.26e-10,15;UBERON:0002371,6.29e-07,76 | |||
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| ||
|short_description=p6@RNF38 | |short_description=p6@RNF38 | ||
}} | }} |
Latest revision as of 09:48, 17 September 2015
Short description: | p6@RNF38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RNF38_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 73bp_to_ENST00000377877_5end |
EntrezGene: | RNF38 |
HGNC: | 18052 |
UniProt: | B1AM81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.90e-14 | 98 |
blood island | 8.90e-14 | 98 |
hemolymphoid system | 1.84e-11 | 108 |
connective tissue | 2.10e-11 | 371 |
blood | 4.26e-10 | 15 |
haemolymphatic fluid | 4.26e-10 | 15 |
organism substance | 4.26e-10 | 15 |
bone marrow | 6.29e-07 | 76 |