FFCP PHASE1:Hg19::chr10:17275575..17275660,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7431 | |EntrezGene=7431 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12692 | |HGNC=12692 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=351bp_to_ENST00000495528_5end | |association_with_transcript=351bp_to_ENST00000495528_5end | ||
|cluster_id=chr10:17275575..17275660,+ | |||
|coexpression_cluster_id=C581 | |coexpression_cluster_id=C581 | ||
|description=CAGE_peak_3_at_VIM_5end | |description=CAGE_peak_3_at_VIM_5end | ||
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|ontology_enrichment_celltype=CL:0000055!5.39e-32!180;CL:0002371!1.78e-27!591;CL:0000144!3.93e-24!625;CL:0000048!4.99e-24!430;CL:0000723!3.33e-22!436;CL:0000034!7.05e-21!444;CL:0000222!3.05e-17!119;CL:0000057!3.90e-17!75;CL:0000012!1.20e-13!682;CL:0000548!1.30e-13!679;CL:0000004!1.30e-13!679;CL:0000255!1.30e-13!679;CL:0000680!3.97e-13!57;CL:0000056!3.97e-13!57;CL:0000355!3.97e-13!57;CL:0000183!1.48e-12!59;CL:0000187!2.24e-12!54;CL:0002320!3.18e-12!365;CL:0002057!4.28e-12!42;CL:0000192!3.08e-11!42;CL:0000514!3.08e-11!42;CL:0000393!5.56e-11!60;CL:0000211!5.56e-11!60;CL:0000557!7.20e-11!71;CL:0000134!7.31e-11!358;CL:0002009!8.44e-11!65;CL:0000219!1.51e-10!390;CL:0000860!1.80e-10!45;CL:0002194!1.83e-10!63;CL:0000576!1.83e-10!63;CL:0000040!1.83e-10!63;CL:0000559!1.83e-10!63;CL:0000359!5.76e-10!32;CL:0000839!6.63e-10!70;CL:0000766!2.55e-09!76;CL:0000003!1.23e-08!722;CL:0002620!3.08e-08!23;CL:0002139!1.54e-07!24 | |ontology_enrichment_celltype=CL:0000055!5.39e-32!180;CL:0002371!1.78e-27!591;CL:0000144!3.93e-24!625;CL:0000048!4.99e-24!430;CL:0000723!3.33e-22!436;CL:0000034!7.05e-21!444;CL:0000222!3.05e-17!119;CL:0000057!3.90e-17!75;CL:0000012!1.20e-13!682;CL:0000548!1.30e-13!679;CL:0000004!1.30e-13!679;CL:0000255!1.30e-13!679;CL:0000680!3.97e-13!57;CL:0000056!3.97e-13!57;CL:0000355!3.97e-13!57;CL:0000183!1.48e-12!59;CL:0000187!2.24e-12!54;CL:0002320!3.18e-12!365;CL:0002057!4.28e-12!42;CL:0000192!3.08e-11!42;CL:0000514!3.08e-11!42;CL:0000393!5.56e-11!60;CL:0000211!5.56e-11!60;CL:0000557!7.20e-11!71;CL:0000134!7.31e-11!358;CL:0002009!8.44e-11!65;CL:0000219!1.51e-10!390;CL:0000860!1.80e-10!45;CL:0002194!1.83e-10!63;CL:0000576!1.83e-10!63;CL:0000040!1.83e-10!63;CL:0000559!1.83e-10!63;CL:0000359!5.76e-10!32;CL:0000839!6.63e-10!70;CL:0000766!2.55e-09!76;CL:0000003!1.23e-08!722;CL:0002620!3.08e-08!23;CL:0002139!1.54e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.94e-14;33!CL:0002057;8.94e-14;33!CL:0000473;5.48e-13;39!CL:0000234;5.48e-13;39!CL:0000359;9.75e-10;32!CL:0000192;1.32e-08;43!CL:0002620;2.02e-08;23!CL:0002139;1.42e-07;24!CL:0000057;2.37e-07;73!CL:0000187;2.37e-07;55 | |ontology_enrichment_celltype_v019=CL:0000860;8.94e-14;33!CL:0002057;8.94e-14;33!CL:0000473;5.48e-13;39!CL:0000234;5.48e-13;39!CL:0000359;9.75e-10;32!CL:0000192;1.32e-08;43!CL:0002620;2.02e-08;23!CL:0002139;1.42e-07;24!CL:0000057;2.37e-07;73!CL:0000187;2.37e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.99e-25,427;CL:0000723,2.44e-23,433;CL:0000034,4.84e-22,441;CL:0000222,5.50e-18,121;CL:0000057,1.15e-17,76;CL:0000473,5.38e-14,48;CL:0000234,5.38e-14,48;CL:0000680,1.20e-13,58;CL:0000056,1.20e-13,58;CL:0000355,1.20e-13,58;CL:0000187,7.05e-13,55;CL:0002320,9.79e-13,361;CL:0000557,2.46e-12,67;CL:0000860,2.71e-12,42;CL:0002057,2.71e-12,42;CL:0002009,3.05e-12,61;CL:0002194,6.72e-12,59;CL:0000576,6.72e-12,59;CL:0000040,6.72e-12,59;CL:0000559,6.72e-12,59;CL:0000192,1.02e-11,43;CL:0000514,1.02e-11,43;CL:0000839,2.26e-11,66;CL:0000134,2.49e-11,354;CL:0000393,2.93e-11,61;CL:0000211,2.93e-11,61;CL:0000219,3.86e-11,386;CL:0000766,1.21e-10,72;CL:0000359,4.00e-10,32;CL:0002620,2.30e-08,23;CL:0002139,1.19e-07,24;CL:0000115,7.43e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;1.83e-09;42!CL:0000514;1.32e-08;43!CL:0000355;1.86e-07;58 | |ontology_enrichment_development_v019=CL:0002057;1.83e-09;42!CL:0000514;1.32e-08;43!CL:0000355;1.86e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.42e-26!167;UBERON:0003081!3.02e-22!216;UBERON:0002049!7.19e-19!79;UBERON:0007798!7.19e-19!79;UBERON:0000914!2.36e-17!83;UBERON:0002329!2.36e-17!83;UBERON:0003077!2.36e-17!83;UBERON:0003059!2.36e-17!83;UBERON:0007282!2.36e-17!83;UBERON:0009618!2.36e-17!83;UBERON:0007285!2.36e-17!83;UBERON:0000055!5.20e-17!69;UBERON:0004535!2.69e-16!110;UBERON:0004290!3.44e-16!70;UBERON:0001009!2.32e-15!113;UBERON:0001981!5.63e-15!60;UBERON:0007500!5.63e-15!60;UBERON:0004537!5.63e-15!60;UBERON:0006965!5.63e-15!60;UBERON:0001637!2.24e-14!42;UBERON:0003509!2.24e-14!42;UBERON:0004572!2.24e-14!42;UBERON:0004872!7.36e-14!84;UBERON:0000926!7.82e-13!448;UBERON:0004120!7.82e-13!448;UBERON:0006603!7.82e-13!448;UBERON:0001134!1.07e-12!61;UBERON:0002036!1.07e-12!61;UBERON:0003082!1.07e-12!61;UBERON:0002384!1.20e-12!375;UBERON:0004765!2.12e-12!101;UBERON:0001434!2.12e-12!101;UBERON:0000486!4.02e-12!82;UBERON:0002385!6.55e-12!63;UBERON:0001015!6.55e-12!63;UBERON:0000383!6.55e-12!63;UBERON:0002371!9.58e-12!80;UBERON:0001474!4.38e-11!86;UBERON:0004573!4.93e-11!33;UBERON:0004571!4.93e-11!33;UBERON:0002193!7.77e-09!112;UBERON:0000947!8.79e-08!21;UBERON:0010191!8.79e-08!21;UBERON:0002390!2.21e-07!102;UBERON:0003061!2.21e-07!102;UBERON:0003914!2.85e-07!118;UBERON:0005256!2.85e-07!143 | |ontology_enrichment_uberon=UBERON:0002204!4.42e-26!167;UBERON:0003081!3.02e-22!216;UBERON:0002049!7.19e-19!79;UBERON:0007798!7.19e-19!79;UBERON:0000914!2.36e-17!83;UBERON:0002329!2.36e-17!83;UBERON:0003077!2.36e-17!83;UBERON:0003059!2.36e-17!83;UBERON:0007282!2.36e-17!83;UBERON:0009618!2.36e-17!83;UBERON:0007285!2.36e-17!83;UBERON:0000055!5.20e-17!69;UBERON:0004535!2.69e-16!110;UBERON:0004290!3.44e-16!70;UBERON:0001009!2.32e-15!113;UBERON:0001981!5.63e-15!60;UBERON:0007500!5.63e-15!60;UBERON:0004537!5.63e-15!60;UBERON:0006965!5.63e-15!60;UBERON:0001637!2.24e-14!42;UBERON:0003509!2.24e-14!42;UBERON:0004572!2.24e-14!42;UBERON:0004872!7.36e-14!84;UBERON:0000926!7.82e-13!448;UBERON:0004120!7.82e-13!448;UBERON:0006603!7.82e-13!448;UBERON:0001134!1.07e-12!61;UBERON:0002036!1.07e-12!61;UBERON:0003082!1.07e-12!61;UBERON:0002384!1.20e-12!375;UBERON:0004765!2.12e-12!101;UBERON:0001434!2.12e-12!101;UBERON:0000486!4.02e-12!82;UBERON:0002385!6.55e-12!63;UBERON:0001015!6.55e-12!63;UBERON:0000383!6.55e-12!63;UBERON:0002371!9.58e-12!80;UBERON:0001474!4.38e-11!86;UBERON:0004573!4.93e-11!33;UBERON:0004571!4.93e-11!33;UBERON:0002193!7.77e-09!112;UBERON:0000947!8.79e-08!21;UBERON:0010191!8.79e-08!21;UBERON:0002390!2.21e-07!102;UBERON:0003061!2.21e-07!102;UBERON:0003914!2.85e-07!118;UBERON:0005256!2.85e-07!143 | ||
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| ||
|short_description=p3@VIM | |short_description=p3@VIM | ||
}} | }} |
Latest revision as of 10:39, 17 September 2015
Short description: | p3@VIM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VIM_5end |
Coexpression cluster: | C581_Fibroblast_Keratocytes_Lens_CD14_Mesenchymal_Hepatic_Hair |
Association with transcript: | 351bp_to_ENST00000495528_5end |
EntrezGene: | VIM |
HGNC: | 12692 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data