FFCP PHASE1:Hg19::chr15:39880723..39880752,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |EntrezGene=7057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |HGNC=11785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_uc010bbi.2_5end | |association_with_transcript=-48bp_to_uc010bbi.2_5end | ||
|cluster_id=chr15:39880723..39880752,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_2_at_THBS1_5end | |description=CAGE_peak_2_at_THBS1_5end | ||
|id=chr15:39880723..39880752,+ | |id=chr15:39880723..39880752,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.04e-21!180;CL:0002371!5.18e-19!591;CL:0000057!9.37e-19!75;CL:0000222!3.36e-16!119;CL:0000144!3.45e-16!625;CL:0000220!2.45e-15!246;CL:0002321!4.98e-15!248;CL:0000548!5.17e-14!679;CL:0000004!5.17e-14!679;CL:0000255!5.17e-14!679;CL:0000012!1.63e-13!682;CL:0000115!2.71e-11!35;CL:0002139!3.89e-10!24;CL:0002078!1.08e-09!44;CL:0000213!4.17e-09!57;CL:0000215!4.17e-09!57;CL:0000192!1.62e-08!42;CL:0000514!1.62e-08!42;CL:0000680!2.39e-08!57;CL:0000056!2.39e-08!57;CL:0000355!2.39e-08!57;CL:0002620!3.07e-08!23;CL:0000359!6.43e-08!32;CL:0000187!9.08e-08!54;CL:0000071!1.40e-07!18;CL:0002546!1.40e-07!18;CL:0000183!2.19e-07!59;CL:0002334!2.59e-07!12;CL:0000393!9.81e-07!60;CL:0000211!9.81e-07!60 | |ontology_enrichment_celltype=CL:0000055!4.04e-21!180;CL:0002371!5.18e-19!591;CL:0000057!9.37e-19!75;CL:0000222!3.36e-16!119;CL:0000144!3.45e-16!625;CL:0000220!2.45e-15!246;CL:0002321!4.98e-15!248;CL:0000548!5.17e-14!679;CL:0000004!5.17e-14!679;CL:0000255!5.17e-14!679;CL:0000012!1.63e-13!682;CL:0000115!2.71e-11!35;CL:0002139!3.89e-10!24;CL:0002078!1.08e-09!44;CL:0000213!4.17e-09!57;CL:0000215!4.17e-09!57;CL:0000192!1.62e-08!42;CL:0000514!1.62e-08!42;CL:0000680!2.39e-08!57;CL:0000056!2.39e-08!57;CL:0000355!2.39e-08!57;CL:0002620!3.07e-08!23;CL:0000359!6.43e-08!32;CL:0000187!9.08e-08!54;CL:0000071!1.40e-07!18;CL:0002546!1.40e-07!18;CL:0000183!2.19e-07!59;CL:0002334!2.59e-07!12;CL:0000393!9.81e-07!60;CL:0000211!9.81e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.09e-10;24!CL:0000115;2.18e-10;36!CL:0002334;4.21e-08;12!CL:0000359;5.07e-08;32!CL:0002620;6.41e-08;23!CL:0000071;8.66e-08;18!CL:0000349;5.44e-07;19!CL:0002078;9.76e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.07e-19,76;CL:0000222,3.04e-15,121;CL:0002321,1.03e-12,250;CL:0000115,2.61e-12,36;CL:0002139,9.18e-11,24;CL:0002078,1.32e-09,45;CL:0000213,1.40e-09,58;CL:0000215,1.40e-09,58;CL:0000723,3.47e-09,433;CL:0000048,1.23e-08,427;CL:0000359,2.60e-08,32;CL:0002334,3.82e-08,12;CL:0000034,4.86e-08,441;CL:0002620,6.39e-08,23;CL:0000192,6.40e-08,43;CL:0000514,6.40e-08,43;CL:0000071,7.31e-08,18;CL:0002546,7.31e-08,18;CL:0000680,1.14e-07,58;CL:0000056,1.14e-07,58;CL:0000355,1.14e-07,58;CL:0000187,4.81e-07,55;CL:0000349,4.85e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002546;8.66e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.44e-20!79;UBERON:0007798!7.44e-20!79;UBERON:0000055!2.28e-19!69;UBERON:0004872!2.74e-19!84;UBERON:0000468!1.13e-18!659;UBERON:0001981!2.59e-17!60;UBERON:0007500!2.59e-17!60;UBERON:0004537!2.59e-17!60;UBERON:0006965!2.59e-17!60;UBERON:0001009!1.34e-16!113;UBERON:0004535!1.62e-16!110;UBERON:0000467!4.09e-16!625;UBERON:0000480!4.80e-16!626;UBERON:0003914!7.75e-15!118;UBERON:0001637!4.16e-13!42;UBERON:0003509!4.16e-13!42;UBERON:0004572!4.16e-13!42;UBERON:0000926!4.18e-13!448;UBERON:0004120!4.18e-13!448;UBERON:0006603!4.18e-13!448;UBERON:0003102!2.69e-12!95;UBERON:0000490!8.83e-12!138;UBERON:0002199!6.73e-10!45;UBERON:0002416!6.73e-10!45;UBERON:0000486!7.66e-10!82;UBERON:0005256!9.47e-10!143;UBERON:0000914!1.29e-09!83;UBERON:0002329!1.29e-09!83;UBERON:0003077!1.29e-09!83;UBERON:0003059!1.29e-09!83;UBERON:0007282!1.29e-09!83;UBERON:0009618!1.29e-09!83;UBERON:0007285!1.29e-09!83;UBERON:0004573!1.60e-09!33;UBERON:0004571!1.60e-09!33;UBERON:0002100!7.33e-09!216;UBERON:0002097!9.82e-09!40;UBERON:0003081!1.27e-08!216;UBERON:0000923!2.31e-08!604;UBERON:0005291!2.31e-08!604;UBERON:0006598!2.31e-08!604;UBERON:0002532!2.31e-08!604;UBERON:0004290!3.41e-08!70;UBERON:0002050!3.57e-08!605;UBERON:0005423!3.57e-08!605;UBERON:0000922!5.12e-08!612;UBERON:0004923!5.85e-08!57;UBERON:0001986!1.40e-07!18;UBERON:0004638!1.40e-07!18;UBERON:0004852!1.40e-07!18;UBERON:0001134!3.57e-07!61;UBERON:0002036!3.57e-07!61;UBERON:0003082!3.57e-07!61;UBERON:0002385!3.84e-07!63;UBERON:0001015!3.84e-07!63;UBERON:0000383!3.84e-07!63;UBERON:0000487!5.74e-07!22;UBERON:0000947!6.19e-07!21;UBERON:0010191!6.19e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.28e-11;42!UBERON:0003509;3.28e-11;42!UBERON:0004572;3.28e-11;42!UBERON:0007500;4.22e-10;56!UBERON:0001981;4.22e-10;56!UBERON:0004537;4.22e-10;56!UBERON:0000055;1.80e-09;65!UBERON:0004573;2.48e-09;33!UBERON:0004571;2.48e-09;33!UBERON:0002049;2.74e-08;75!UBERON:0007798;2.74e-08;75!UBERON:0004638;8.66e-08;18!UBERON:0001986;8.66e-08;18!UBERON:0004852;8.66e-08;18!UBERON:0000487;2.24e-07;22!UBERON:0006914;2.78e-07;25!UBERON:0000947;2.82e-07;21!UBERON:0010191;2.82e-07;21!UBERON:0002097;5.76e-07;41!UBERON:0002199;6.49e-07;46!UBERON:0002416;6.49e-07;46 | |||
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|phase1_expression=54.503513781167,162.716398157147,27.2041999905224,84.0615706166296,48.2717981981471,76.7657901208324,32.9289841618804,0.631719873426831,1.30592814099919,1.47440361900905,11.1648186875588,8.08233076881637,15.8260186937072,1.36142988256051,2.65117900582333,45.0457848122689,46.4074786578462,37.245814609756,27.3242367322684,0.123121058076788,3.06001036866379,2.5076377718247,0.286235987131057,1.91624195102038,3.64073654824928,0,0,0,0,0.383829398097213,1.08371286321253,3.67768489791571,7.53014796945625,0.739508020333575,0,0,0,2.21598163412751,7.42014455639524,0,0.223915474239924,0,0.257575567634187,5.52513307362346,0.377875943688809,0,15.3403164357752,1.6446715520873,0.309706370895104,28.4815468398929,2.56160706529101,0.709446689665756,15.5135556331478,3.22742341791913,0,16.3770835402066,1.91034305040492,1.34834090667051,29.0779697752357,1.28371610830437,2.55734850319616,9.89553900560148,0.797854630486527,1.27867425159808,52.5278721917737,5.10646702222026,1.24564449799115,16.8336605722018,5.21482918420201,1.73751075764093,31.4807741369352,1.47311054395026,1.26584954976354,0,0.212604299965044,0,0.22465726229299,1.65194582125657,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1240428803871,3.61439152384566,8.52274448081012,12.8913401875133,1.5905718941022,11.1926020169606,0.283604451492204,1.99556457716308,1.49319135678314,0.72038491523742,2.18577172975525,0.741568885568859,0,0,0,0,0,0,3.9752481473341,1.72046919021225,12.1499175562658,6.21838736116411,35.2379526416321,89.4133636305219,16.9285922894817,6.20200222006389,5.33649394030065,13.3888245105868,28.6008815147494,9.88353737434066,32.7043157114547,35.6633187935493,129.622711661082,23.0393298972926,5.16417557040191,5.51796254368279,3.06633274931766,0.949265659568129,9.89289417224199,0,0,4.79703457356788,43.2365597974927,29.1250176828533,16.1539200592127,29.8310085578766,6.38403087957043,7.8494864019923,7.47242970107935,81.6469585260799,1.8672662123986,4.17603083416033,10.6250237023748,0.908144565869588,2.30470369792,0,1.5608003841516,0.570471821544449,2.83952493048422,1.17434498643765,0.971237666208789,0.421352420106746,2.44985005505872,3.93069815397658,4.33968280938215,21.384051431077,82.8344213083165,0.910161361938026,2.15585442544872,0.505008341862199,1.25118519871964,0.554128230968366,14.4862614890677,83.9776560489314,28.8457073100666,7.14622753908133,153.916307421044,31.3929361563294,26.2795557437857,54.6165794873612,37.7172257012686,84.763737675012,17.3088676388379,20.2531598689519,44.3338373483454,52.0013574942876,25.3137221266323,27.479829659198,69.5818801332564,20.6541801366663,17.8038621926012,3.47869535693934,5.18217629122586,3.72845974005705,0.121973706129595,0.132529768321485,0.464775771478074,0.10366105501537,0.504641701751257,0,26.5964204960687,222.561364614738,19.3388889893473,48.2942645153258,22.3782639317572,2.48444280083672,2.52877035117153,1.20505514941741,3.86028904563379,3.92182999366331,1.66089433377768,1.48314438976181,0.784885860501384,3.46272441251751,14.0249536378683,15.426595118379,0.8231480226628,8.82052268313252,0,0,0.590789906681404,0,0.122988438543114,1.54411029268673,16.0235416696593,3.37205259772859,10.5555421032212,12.7772054318771,0.325808305310325,1.03993478527958,5.77325368101093,0,0.352226082707465,28.8732895522148,35.649884468399,55.7444666047373,0.790204397959275,0,0,0,0.148631162288728,0.93733833986777,25.7012656144255,8.22295564005842,6.62733068001077,13.0785272331283,13.0350110916172,0.492663237895943,0,0,0,0,0.253991577168676,0,0,3.4214489204541,3.70178973731965,0,0,0.897048674762886,0.87192013766656,0.80672114403045,2.97324946242889,0,0,15.4244107619225,29.1220823351825,1.02882949704857,0,2.1313774321288,3.86040582876998,2.17048642156577,4.11620168390384,0.65147236858747,1.77695974371273,0.791951872933429,0,1.74306691720059,0,0,0,0,9.34536936417172,11.4861935834114,1.42636905040718,4.05387658669222,6.1642896765115,3.04403637507822,0.112085143993527,0,0,0,0,0,0.773288812777695,1.00509759200609,3.18969375826582,0,0,0.414415513436035,3.6807447515742,2.00068208423871,2.98391526069709,71.126034643536,165.225243626172,111.653309844026,72.5105358804895,3.91229929646035,0,6.2083842775503,8.63493278096067,4.97796755062599,20.5045330144676,0.783204629850962,1.37257369524342,0,0.215714200818617,0.960548020230999,3.63753085735511,16.6435439510497,26.0055652263525,32.9983384398973,103.893755916018,150.995130804994,22.1680728212363,25.0736552042685,41.5003116550507,35.6203359467978,39.6318913072825,26.2791353463428,1.56041596426237,25.4434670299974,8.8319887629569,0.362578348774867,55.3397858037066,4.05156351317944,5.62590796006573,5.09855270418808,12.3256950061859,0,0.0770153371044148,0,2.92278449306521,0.211103257785751,40.9440182655228,16.6691831170985,17.9210210364776,77.1136263451447,0.270946437543853,0,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0,0.656029291399411,0.976135183992909,1.33953315142039,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| ||
|short_description=p2@THBS1 | |short_description=p2@THBS1 | ||
}} | }} |
Latest revision as of 10:46, 17 September 2015
Short description: | p2@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -48bp_to_uc010bbi.2_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.07e-19 | 76 |
mesodermal cell | 3.04e-15 | 121 |
embryonic cell | 1.03e-12 | 250 |
endothelial cell | 2.61e-12 | 36 |
endothelial cell of vascular tree | 9.18e-11 | 24 |
meso-epithelial cell | 1.32e-09 | 45 |
lining cell | 1.40e-09 | 58 |
barrier cell | 1.40e-09 | 58 |
somatic stem cell | 3.47e-09 | 433 |
multi fate stem cell | 1.23e-08 | 427 |
vascular associated smooth muscle cell | 2.60e-08 | 32 |
preadipocyte | 3.82e-08 | 12 |
stem cell | 4.86e-08 | 441 |
skin fibroblast | 6.39e-08 | 23 |
smooth muscle cell | 6.40e-08 | 43 |
smooth muscle myoblast | 6.40e-08 | 43 |
blood vessel endothelial cell | 7.31e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.31e-08 | 18 |
muscle precursor cell | 1.14e-07 | 58 |
myoblast | 1.14e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.14e-07 | 58 |
muscle cell | 4.81e-07 | 55 |
extraembryonic cell | 4.85e-07 | 19 |