FFCP PHASE1:Hg19::chr15:39880723..39880752,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-48bp_to_uc010bbi.2_5end | |||
|cluster_id=chr15:39880723..39880752,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_2_at_THBS1_5end | |||
|id=chr15:39880723..39880752,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.04e-21!180;CL:0002371!5.18e-19!591;CL:0000057!9.37e-19!75;CL:0000222!3.36e-16!119;CL:0000144!3.45e-16!625;CL:0000220!2.45e-15!246;CL:0002321!4.98e-15!248;CL:0000548!5.17e-14!679;CL:0000004!5.17e-14!679;CL:0000255!5.17e-14!679;CL:0000012!1.63e-13!682;CL:0000115!2.71e-11!35;CL:0002139!3.89e-10!24;CL:0002078!1.08e-09!44;CL:0000213!4.17e-09!57;CL:0000215!4.17e-09!57;CL:0000192!1.62e-08!42;CL:0000514!1.62e-08!42;CL:0000680!2.39e-08!57;CL:0000056!2.39e-08!57;CL:0000355!2.39e-08!57;CL:0002620!3.07e-08!23;CL:0000359!6.43e-08!32;CL:0000187!9.08e-08!54;CL:0000071!1.40e-07!18;CL:0002546!1.40e-07!18;CL:0000183!2.19e-07!59;CL:0002334!2.59e-07!12;CL:0000393!9.81e-07!60;CL:0000211!9.81e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.09e-10;24!CL:0000115;2.18e-10;36!CL:0002334;4.21e-08;12!CL:0000359;5.07e-08;32!CL:0002620;6.41e-08;23!CL:0000071;8.66e-08;18!CL:0000349;5.44e-07;19!CL:0002078;9.76e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.07e-19,76;CL:0000222,3.04e-15,121;CL:0002321,1.03e-12,250;CL:0000115,2.61e-12,36;CL:0002139,9.18e-11,24;CL:0002078,1.32e-09,45;CL:0000213,1.40e-09,58;CL:0000215,1.40e-09,58;CL:0000723,3.47e-09,433;CL:0000048,1.23e-08,427;CL:0000359,2.60e-08,32;CL:0002334,3.82e-08,12;CL:0000034,4.86e-08,441;CL:0002620,6.39e-08,23;CL:0000192,6.40e-08,43;CL:0000514,6.40e-08,43;CL:0000071,7.31e-08,18;CL:0002546,7.31e-08,18;CL:0000680,1.14e-07,58;CL:0000056,1.14e-07,58;CL:0000355,1.14e-07,58;CL:0000187,4.81e-07,55;CL:0000349,4.85e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002546;8.66e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.44e-20!79;UBERON:0007798!7.44e-20!79;UBERON:0000055!2.28e-19!69;UBERON:0004872!2.74e-19!84;UBERON:0000468!1.13e-18!659;UBERON:0001981!2.59e-17!60;UBERON:0007500!2.59e-17!60;UBERON:0004537!2.59e-17!60;UBERON:0006965!2.59e-17!60;UBERON:0001009!1.34e-16!113;UBERON:0004535!1.62e-16!110;UBERON:0000467!4.09e-16!625;UBERON:0000480!4.80e-16!626;UBERON:0003914!7.75e-15!118;UBERON:0001637!4.16e-13!42;UBERON:0003509!4.16e-13!42;UBERON:0004572!4.16e-13!42;UBERON:0000926!4.18e-13!448;UBERON:0004120!4.18e-13!448;UBERON:0006603!4.18e-13!448;UBERON:0003102!2.69e-12!95;UBERON:0000490!8.83e-12!138;UBERON:0002199!6.73e-10!45;UBERON:0002416!6.73e-10!45;UBERON:0000486!7.66e-10!82;UBERON:0005256!9.47e-10!143;UBERON:0000914!1.29e-09!83;UBERON:0002329!1.29e-09!83;UBERON:0003077!1.29e-09!83;UBERON:0003059!1.29e-09!83;UBERON:0007282!1.29e-09!83;UBERON:0009618!1.29e-09!83;UBERON:0007285!1.29e-09!83;UBERON:0004573!1.60e-09!33;UBERON:0004571!1.60e-09!33;UBERON:0002100!7.33e-09!216;UBERON:0002097!9.82e-09!40;UBERON:0003081!1.27e-08!216;UBERON:0000923!2.31e-08!604;UBERON:0005291!2.31e-08!604;UBERON:0006598!2.31e-08!604;UBERON:0002532!2.31e-08!604;UBERON:0004290!3.41e-08!70;UBERON:0002050!3.57e-08!605;UBERON:0005423!3.57e-08!605;UBERON:0000922!5.12e-08!612;UBERON:0004923!5.85e-08!57;UBERON:0001986!1.40e-07!18;UBERON:0004638!1.40e-07!18;UBERON:0004852!1.40e-07!18;UBERON:0001134!3.57e-07!61;UBERON:0002036!3.57e-07!61;UBERON:0003082!3.57e-07!61;UBERON:0002385!3.84e-07!63;UBERON:0001015!3.84e-07!63;UBERON:0000383!3.84e-07!63;UBERON:0000487!5.74e-07!22;UBERON:0000947!6.19e-07!21;UBERON:0010191!6.19e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.28e-11;42!UBERON:0003509;3.28e-11;42!UBERON:0004572;3.28e-11;42!UBERON:0007500;4.22e-10;56!UBERON:0001981;4.22e-10;56!UBERON:0004537;4.22e-10;56!UBERON:0000055;1.80e-09;65!UBERON:0004573;2.48e-09;33!UBERON:0004571;2.48e-09;33!UBERON:0002049;2.74e-08;75!UBERON:0007798;2.74e-08;75!UBERON:0004638;8.66e-08;18!UBERON:0001986;8.66e-08;18!UBERON:0004852;8.66e-08;18!UBERON:0000487;2.24e-07;22!UBERON:0006914;2.78e-07;25!UBERON:0000947;2.82e-07;21!UBERON:0010191;2.82e-07;21!UBERON:0002097;5.76e-07;41!UBERON:0002199;6.49e-07;46!UBERON:0002416;6.49e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.90e-20,83;UBERON:0002049,4.01e-19,78;UBERON:0007798,4.01e-19,78;UBERON:0000055,5.86e-19,68;UBERON:0007500,2.56e-17,59;UBERON:0001981,2.56e-17,59;UBERON:0004537,2.56e-17,59;UBERON:0006965,2.56e-17,59;UBERON:0004535,3.22e-15,109;UBERON:0001009,3.57e-15,112;UBERON:0003914,2.88e-14,117;UBERON:0001637,3.79e-14,42;UBERON:0003509,3.79e-14,42;UBERON:0004572,3.79e-14,42;UBERON:0000926,8.73e-14,315;UBERON:0004120,8.73e-14,315;UBERON:0006603,8.73e-14,315;UBERON:0003081,7.51e-11,203;UBERON:0003102,2.33e-10,99;UBERON:0004573,4.31e-10,33;UBERON:0004571,4.31e-10,33;UBERON:0002199,9.47e-10,46;UBERON:0002416,9.47e-10,46;UBERON:0000490,1.11e-09,148;UBERON:0004923,8.99e-09,66;UBERON:0002097,9.04e-09,41;UBERON:0000486,1.48e-08,83;UBERON:0007503,5.64e-08,78;UBERON:0004638,7.31e-08,18;UBERON:0001986,7.31e-08,18;UBERON:0004852,7.31e-08,18;UBERON:0000487,1.98e-07,22;UBERON:0000947,2.09e-07,21;UBERON:0010191,2.09e-07,21;UBERON:0006914,2.48e-07,25;UBERON:0005256,3.99e-07,122;UBERON:0002050,6.80e-07,564;UBERON:0002329,8.84e-07,71;UBERON:0003059,8.84e-07,71;UBERON:0007282,8.84e-07,71;UBERON:0004290,8.84e-07,71;UBERON:0009618,8.84e-07,71 | |||
|phase1_expression=54.503513781167,162.716398157147,27.2041999905224,84.0615706166296,48.2717981981471,76.7657901208324,32.9289841618804,0.631719873426831,1.30592814099919,1.47440361900905,11.1648186875588,8.08233076881637,15.8260186937072,1.36142988256051,2.65117900582333,45.0457848122689,46.4074786578462,37.245814609756,27.3242367322684,0.123121058076788,3.06001036866379,2.5076377718247,0.286235987131057,1.91624195102038,3.64073654824928,0,0,0,0,0.383829398097213,1.08371286321253,3.67768489791571,7.53014796945625,0.739508020333575,0,0,0,2.21598163412751,7.42014455639524,0,0.223915474239924,0,0.257575567634187,5.52513307362346,0.377875943688809,0,15.3403164357752,1.6446715520873,0.309706370895104,28.4815468398929,2.56160706529101,0.709446689665756,15.5135556331478,3.22742341791913,0,16.3770835402066,1.91034305040492,1.34834090667051,29.0779697752357,1.28371610830437,2.55734850319616,9.89553900560148,0.797854630486527,1.27867425159808,52.5278721917737,5.10646702222026,1.24564449799115,16.8336605722018,5.21482918420201,1.73751075764093,31.4807741369352,1.47311054395026,1.26584954976354,0,0.212604299965044,0,0.22465726229299,1.65194582125657,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1240428803871,3.61439152384566,8.52274448081012,12.8913401875133,1.5905718941022,11.1926020169606,0.283604451492204,1.99556457716308,1.49319135678314,0.72038491523742,2.18577172975525,0.741568885568859,0,0,0,0,0,0,3.9752481473341,1.72046919021225,12.1499175562658,6.21838736116411,35.2379526416321,89.4133636305219,16.9285922894817,6.20200222006389,5.33649394030065,13.3888245105868,28.6008815147494,9.88353737434066,32.7043157114547,35.6633187935493,129.622711661082,23.0393298972926,5.16417557040191,5.51796254368279,3.06633274931766,0.949265659568129,9.89289417224199,0,0,4.79703457356788,43.2365597974927,29.1250176828533,16.1539200592127,29.8310085578766,6.38403087957043,7.8494864019923,7.47242970107935,81.6469585260799,1.8672662123986,4.17603083416033,10.6250237023748,0.908144565869588,2.30470369792,0,1.5608003841516,0.570471821544449,2.83952493048422,1.17434498643765,0.971237666208789,0.421352420106746,2.44985005505872,3.93069815397658,4.33968280938215,21.384051431077,82.8344213083165,0.910161361938026,2.15585442544872,0.505008341862199,1.25118519871964,0.554128230968366,14.4862614890677,83.9776560489314,28.8457073100666,7.14622753908133,153.916307421044,31.3929361563294,26.2795557437857,54.6165794873612,37.7172257012686,84.763737675012,17.3088676388379,20.2531598689519,44.3338373483454,52.0013574942876,25.3137221266323,27.479829659198,69.5818801332564,20.6541801366663,17.8038621926012,3.47869535693934,5.18217629122586,3.72845974005705,0.121973706129595,0.132529768321485,0.464775771478074,0.10366105501537,0.504641701751257,0,26.5964204960687,222.561364614738,19.3388889893473,48.2942645153258,22.3782639317572,2.48444280083672,2.52877035117153,1.20505514941741,3.86028904563379,3.92182999366331,1.66089433377768,1.48314438976181,0.784885860501384,3.46272441251751,14.0249536378683,15.426595118379,0.8231480226628,8.82052268313252,0,0,0.590789906681404,0,0.122988438543114,1.54411029268673,16.0235416696593,3.37205259772859,10.5555421032212,12.7772054318771,0.325808305310325,1.03993478527958,5.77325368101093,0,0.352226082707465,28.8732895522148,35.649884468399,55.7444666047373,0.790204397959275,0,0,0,0.148631162288728,0.93733833986777,25.7012656144255,8.22295564005842,6.62733068001077,13.0785272331283,13.0350110916172,0.492663237895943,0,0,0,0,0.253991577168676,0,0,3.4214489204541,3.70178973731965,0,0,0.897048674762886,0.87192013766656,0.80672114403045,2.97324946242889,0,0,15.4244107619225,29.1220823351825,1.02882949704857,0,2.1313774321288,3.86040582876998,2.17048642156577,4.11620168390384,0.65147236858747,1.77695974371273,0.791951872933429,0,1.74306691720059,0,0,0,0,9.34536936417172,11.4861935834114,1.42636905040718,4.05387658669222,6.1642896765115,3.04403637507822,0.112085143993527,0,0,0,0,0,0.773288812777695,1.00509759200609,3.18969375826582,0,0,0.414415513436035,3.6807447515742,2.00068208423871,2.98391526069709,71.126034643536,165.225243626172,111.653309844026,72.5105358804895,3.91229929646035,0,6.2083842775503,8.63493278096067,4.97796755062599,20.5045330144676,0.783204629850962,1.37257369524342,0,0.215714200818617,0.960548020230999,3.63753085735511,16.6435439510497,26.0055652263525,32.9983384398973,103.893755916018,150.995130804994,22.1680728212363,25.0736552042685,41.5003116550507,35.6203359467978,39.6318913072825,26.2791353463428,1.56041596426237,25.4434670299974,8.8319887629569,0.362578348774867,55.3397858037066,4.05156351317944,5.62590796006573,5.09855270418808,12.3256950061859,0,0.0770153371044148,0,2.92278449306521,0.211103257785751,40.9440182655228,16.6691831170985,17.9210210364776,77.1136263451447,0.270946437543853,0,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0,0.656029291399411,0.976135183992909,1.33953315142039,0.366277859273374,0,5.74265537996172,33.1530725478626,19.2820715812991,0.48335359146061,1.07834031980251,0.921022048356777,3.72158745708233,1.28904293841928,5.075584286998,1.27839941124151,1.06838442776085,6.11554186835619,15.7595855239387,7.40153732468588,1.11273558941105,2.32422774648643,56.9810347763459,0,1.54016790088044,2.66153015158511,0.869932992075073,6.85699610684504,1.28812398067792,1.116475108079,3.16379424718726,2.85945290885737,1.02359116524534,0.855877976067841,0.318203247925937,8.63443504219153,4.49681143958287,5.4907405947211,2.23843564456804,1.01091240786658,6.34041284692033,12.6377536871694,0.975267478179181,16.0850903156648,34.8645484297293,2.04749867111979,16.4030301066307,10.1707304958219,1.65409603063837,55.7288739202625,26.3070531152258,1.15755106853338,3.27947376023316,6.69604243976923,16.7304688973865,6.76069446077379,1.57752487424457,3.83171259951173,14.26684205925,0.354761064070598,6.33322905892992,4.61012850143863,2.27683904259429,4.54915136318478,2.11688647996127,4.69211592875051,6.53345909167936,1.60044461320525,12.4846558074657,18.5318623234388,16.8503458343937,25.4992974229725,0,0.764637207142375,2.27858874869665,0,0.822724546172388,0.648473311192717,0.540031437238115,2.37937552888281,0,5.77487913158015,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43410110628385,0,0,0,0.73254089635947,0,0,0,14.3246690842614,2.96964680832639,50.6815158463733,0,0,0.556543525114529,0,0,2.39097585901284,1.10513566212459,0,1.32949287252801,0,19.9065336103557,12.1322274048891,0.179021174675609,0,3.45251919729268,0,1.11136990144637,0,0.463840490809256,0,0.7812832832557,0.174919999992391,0.724999575434793,0.568967241427498,1.27126825146383,0.236387681767936,0,0,0.520874984799877,0,0,0,0,0,0.658156191461918,0.21787692703798,0.278847488557207,0.615602068030377,2.05095700524602,0,0,0,3.82801391678303,12.7320654828589,5.33034776018635,0,0,0,0,0,0,0,0.158936578980379,0.632994193584081,0.652931232636591,0.282706142867882,0,1.99052386215701,0.353830258013357,0.611030144933625,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,2.59064976476801,0,0,0,0,0.313932918407225,0,0,1.10939738410511,0,0.293977192243133,2.00236175134926,1.57254001417827,0.171986032471617,0,0,0,0.387956065953678,0,2.48578814858586,2.05562886970126,0.19871461170299,0,0,5.05000567584662,0.85381197895741,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,3.87593227018023,0.288950589901519,0,0,0,11.1739014769189,0,5.30636562417283,0.916641696046735,2.87149209830726,2.79550600698588,3.43380838509257,0.223171457441873,1.2764859772478,40.3535869567492,0,1.81201319306614,1.89556474276683,1.88729922791718,0.492137407573744,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0,0,0.86686278029118,1.62609223218494,0.316801009558219,0,1.34340638123612,2.85878130549347,1.98627591109629,0,1.08599920350743,5.18532894720761,1.30634944043764,1.19730191562487,0,39.189245010647,0.226624183040251,0.58620893471233,0,0,0,0,0,2.77647272676006,1.72924735609633,0.828478110694391,0,0.197611631897944,0,0,0,0.5013797880454,0,0.655745261419609,0,0,0.366078794705889,0,0,0.110929051536852,0.124192805882767,0.553394539744923,1.62474530350739,0,0,3.76425311517075,0.468334905806882,0.144921028610825,2.53733164907686,9.5822457037362,5.54805861502613,7.0079111951783,6.79233334731953,4.44905610798268,1.14420034198462,3.78077309408098,1.39893480524502,7.54061264947133,4.93819978207477,0,7.60788488693671,1.24411862352257,6.38020114939188,19.8263123488459,5.10875870590543,5.33127297036314,2.84809513243263,10.0016762561408,0.859284456339908,8.81664143769138,54.5391367517104,50.8035261122205,9.6150797451182,9.42898568544573,0,0.385239660814607,0,0.782982875895635,20.6302392216168,10.4185113445725,2.20263034055821,1.79088841081487,0.926404341482917,0.219284049578707,1.59020231351293,0,1.01365464391844,4.35610581599509,2.41801239211839,1.21543982470953,0.138258436151731,0,0,0,2.29326894192489,0.491545817507439,0,0,0,0,2.27006381426734,1.47284760201473,0,1.24415452006595,0,0,0,0.109209638192014,0,0,0,0,11.7661609741765,0,0,5.64281509905094,37.3619482370904,0.0642292250964595,0,0,0.41023272848151,0,0,0,0,0.196295437002051,0.11796972334774,1.28400018965175,9.3575789581774,3.4324388592045,0,0.795664888465099,1.35378591028663,0.60511520611056,0.781514011233092,0,31.1166643269184,1.03499260351932,0,0,0,0,1.09394961803644,0,1.48863353516788,0,1.66091155931474,0,0,0,0,1.33053555243958,0,4.11571222649804,0.0679697329768317,0.0657727735628491,0.236387681767936,0.333694205676207,0.706437835654626,0.157115589916002,0.560544326627578,3.65263488203798,4.10262423315381,0,0.0714765441766563,0,0,0.521574816907738,7.21540228257228,2.27937780579341,1.0243108625637,0.691259661814092,1.29068207646083,0.236664001461131,0.170426809518315,0,1.3746412112643,0.62041277132864,2.8666168169323,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0.385870790539723,0.218559560503957,0,2.45148321753905,0,0.196308467114945,0,0,34.325277166939,1.4097587696978,1.67590508731301,0,0.178553938605658,0.705789743431384,0.641930933513346,0,0.458729283404541,0,0,0,1.30905207102113,1.5870805215462,95.2307246506883,26.3440108319908,46.2910421472454,0,0,0.253397002022874,0,0,0,0,0.454672189309436,0,0,0,0.213233981900981,0.23806443146374,0,0.434523000071005,2.91542842709595,0.509177266225319,0.606351566874658,0.870866991587845,0,0.134704106029175,2.15166616178029,2.32862249582209,1.22104902916462,0.106727345877715,0,0.538951212639521,4.69281884806909,1.4668973301944,0,0.665756774185513,1.00636896795513,0 | |||
|short_description=p2@THBS1 | |||
}} |
Latest revision as of 10:46, 17 September 2015
Short description: | p2@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -48bp_to_uc010bbi.2_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.07e-19 | 76 |
mesodermal cell | 3.04e-15 | 121 |
embryonic cell | 1.03e-12 | 250 |
endothelial cell | 2.61e-12 | 36 |
endothelial cell of vascular tree | 9.18e-11 | 24 |
meso-epithelial cell | 1.32e-09 | 45 |
lining cell | 1.40e-09 | 58 |
barrier cell | 1.40e-09 | 58 |
somatic stem cell | 3.47e-09 | 433 |
multi fate stem cell | 1.23e-08 | 427 |
vascular associated smooth muscle cell | 2.60e-08 | 32 |
preadipocyte | 3.82e-08 | 12 |
stem cell | 4.86e-08 | 441 |
skin fibroblast | 6.39e-08 | 23 |
smooth muscle cell | 6.40e-08 | 43 |
smooth muscle myoblast | 6.40e-08 | 43 |
blood vessel endothelial cell | 7.31e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.31e-08 | 18 |
muscle precursor cell | 1.14e-07 | 58 |
myoblast | 1.14e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.14e-07 | 58 |
muscle cell | 4.81e-07 | 55 |
extraembryonic cell | 4.85e-07 | 19 |