FFCP PHASE1:Hg19::chr8:22250390..22250405,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23516 | |EntrezGene=23516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20858 | |HGNC=20858 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFF5 | |UniProt=E5RFF5 | ||
|association_with_transcript=47bp_to_ENST00000520832_5end | |association_with_transcript=47bp_to_ENST00000520832_5end | ||
|cluster_id=chr8:22250390..22250405,+ | |||
|coexpression_cluster_id=C4742 | |||
|description=CAGE_peak_6_at_SLC39A14_5end | |description=CAGE_peak_6_at_SLC39A14_5end | ||
|id=chr8:22250390..22250405,+ | |id=chr8:22250390..22250405,+ | ||
|ontology_enrichment_celltype=CL:0000359!2.93e-16!32;CL:0000192!9.82e-11!42;CL:0000514!9.82e-11!42;CL:0002539!1.02e-10!10;CL:0000187!1.67e-09!54;CL:0000680!2.00e-09!57;CL:0000056!2.00e-09!57;CL:0000355!2.00e-09!57;CL:0000183!4.17e-08!59;CL:0002494!5.51e-08!16;CL:0000393!7.39e-08!60;CL:0000211!7.39e-08!60 | |ontology_enrichment_celltype=CL:0000359!2.93e-16!32;CL:0000192!9.82e-11!42;CL:0000514!9.82e-11!42;CL:0002539!1.02e-10!10;CL:0000187!1.67e-09!54;CL:0000680!2.00e-09!57;CL:0000056!2.00e-09!57;CL:0000355!2.00e-09!57;CL:0000183!4.17e-08!59;CL:0002494!5.51e-08!16;CL:0000393!7.39e-08!60;CL:0000211!7.39e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.00e-18;32!CL:0002539;2.64e-13;10!CL:0000192;5.04e-11;43!CL:0002595;6.54e-10;5!CL:0002596;2.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.09e-19,32;CL:0000192,1.21e-13,43;CL:0000514,1.21e-13,43;CL:0002539,1.46e-13,10;CL:0002595,5.97e-10,5;CL:0000187,7.62e-10,55;CL:0000680,3.80e-09,58;CL:0000056,3.80e-09,58;CL:0000355,3.80e-09,58;CL:0000393,1.61e-08,61;CL:0000211,1.61e-08,61;CL:0000222,3.61e-08,121;CL:0002596,1.75e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;5.04e-11;43!UBERON:0010122;3.64e-07;2 | |||
|ontology_enrichment_disease=DOID:2394!2.43e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.40e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.29e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-22!115;UBERON:0000025!1.74e-18!194;UBERON:0004573!1.09e-15!33;UBERON:0004571!1.09e-15!33;UBERON:0004872!1.38e-15!84;UBERON:0004111!2.31e-15!241;UBERON:0000477!1.76e-14!286;UBERON:0001637!1.81e-14!42;UBERON:0003509!1.81e-14!42;UBERON:0004572!1.81e-14!42;UBERON:0007100!2.49e-13!27;UBERON:0001049!4.65e-13!57;UBERON:0005068!4.65e-13!57;UBERON:0006241!4.65e-13!57;UBERON:0007135!4.65e-13!57;UBERON:0001009!3.18e-11!113;UBERON:0000483!6.24e-11!309;UBERON:0004237!1.02e-10!10;UBERON:0004695!1.02e-10!10;UBERON:0002111!1.02e-10!10;UBERON:0004178!1.02e-10!10;UBERON:0000119!1.30e-10!312;UBERON:0002385!1.89e-10!63;UBERON:0001015!1.89e-10!63;UBERON:0000383!1.89e-10!63;UBERON:0000948!1.94e-10!24;UBERON:0005498!1.94e-10!24;UBERON:0004140!1.94e-10!24;UBERON:0009881!1.94e-10!24;UBERON:0004141!1.94e-10!24;UBERON:0003084!1.94e-10!24;UBERON:0007005!1.94e-10!24;UBERON:0004139!1.94e-10!24;UBERON:0004291!1.94e-10!24;UBERON:0000055!3.01e-10!69;UBERON:0002616!4.06e-10!59;UBERON:0003075!6.20e-10!86;UBERON:0007284!6.20e-10!86;UBERON:0001981!9.81e-10!60;UBERON:0007500!9.81e-10!60;UBERON:0004537!9.81e-10!60;UBERON:0006965!9.81e-10!60;UBERON:0000481!1.23e-09!347;UBERON:0004535!1.56e-09!110;UBERON:0002308!2.08e-09!9;UBERON:0000125!2.08e-09!9;UBERON:0001134!2.37e-09!61;UBERON:0002036!2.37e-09!61;UBERON:0003082!2.37e-09!61;UBERON:0001135!2.88e-09!15;UBERON:0002346!4.53e-09!90;UBERON:0002780!8.24e-09!41;UBERON:0001890!8.24e-09!41;UBERON:0006240!8.24e-09!41;UBERON:0003914!1.49e-08!118;UBERON:0003080!1.80e-08!42;UBERON:0000955!4.64e-08!69;UBERON:0006238!4.64e-08!69;UBERON:0002049!6.89e-08!79;UBERON:0007798!6.89e-08!79;UBERON:0004290!7.65e-08!70;UBERON:0002020!1.17e-07!34;UBERON:0003528!1.17e-07!34;UBERON:0003103!2.12e-07!69;UBERON:0000992!2.54e-07!13;UBERON:0000947!3.40e-07!21;UBERON:0010191!3.40e-07!21;UBERON:0001893!3.72e-07!34;UBERON:0000914!3.87e-07!83;UBERON:0002329!3.87e-07!83;UBERON:0003077!3.87e-07!83;UBERON:0003059!3.87e-07!83;UBERON:0007282!3.87e-07!83;UBERON:0009618!3.87e-07!83;UBERON:0007285!3.87e-07!83;UBERON:0001017!4.71e-07!82;UBERON:0000486!5.05e-07!82;UBERON:0002118!5.32e-07!5;UBERON:0004532!5.32e-07!5;UBERON:0005743!6.79e-07!86;UBERON:0001869!7.35e-07!32;UBERON:0009663!8.94e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.64e-17;33!UBERON:0004571;2.64e-17;33!UBERON:0004237;2.64e-13;10!UBERON:0004695;2.64e-13;10!UBERON:0002111;2.64e-13;10!UBERON:0004178;2.64e-13;10!UBERON:0000125;7.09e-12;9!UBERON:0002308;7.09e-12;9!UBERON:0001637;2.36e-11;42!UBERON:0003509;2.36e-11;42!UBERON:0004572;2.36e-11;42!UBERON:0003834;6.54e-10;5!UBERON:0001533;6.54e-10;5!UBERON:0005383;1.33e-09;3!UBERON:0005382;1.33e-09;3!UBERON:0002298;1.15e-08;6!UBERON:0001135;1.55e-08;15!UBERON:0002148;1.34e-07;2!UBERON:0006331;1.34e-07;2!UBERON:0009662;1.34e-07;2!UBERON:0000947;1.35e-07;21!UBERON:0010191;1.35e-07;21!UBERON:0005396;2.05e-07;2!UBERON:0000369;2.69e-07;4!UBERON:0002435;2.69e-07;4!UBERON:0000204;2.69e-07;4!UBERON:0001873;3.64e-07;2!UBERON:0003513;4.44e-07;7!UBERON:0009663;4.98e-07;7!UBERON:0000055;6.11e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.81e-19,33;UBERON:0004571,3.81e-19,33;UBERON:0001637,4.06e-16,42;UBERON:0003509,4.06e-16,42;UBERON:0004572,4.06e-16,42;UBERON:0000055,4.69e-14,68;UBERON:0004237,1.46e-13,10;UBERON:0004695,1.46e-13,10;UBERON:0002111,1.46e-13,10;UBERON:0004178,1.46e-13,10;UBERON:0007500,7.49e-12,59;UBERON:0001981,7.49e-12,59;UBERON:0004537,7.49e-12,59;UBERON:0006965,7.49e-12,59;UBERON:0000125,8.56e-12,9;UBERON:0002308,8.56e-12,9;UBERON:0002049,1.39e-11,78;UBERON:0007798,1.39e-11,78;UBERON:0000025,6.56e-11,192;UBERON:0004111,1.10e-10,240;UBERON:0004872,2.01e-10,83;UBERON:0001009,3.25e-10,112;UBERON:0003834,5.97e-10,5;UBERON:0001533,5.97e-10,5;UBERON:0001134,1.10e-09,62;UBERON:0002036,1.10e-09,62;UBERON:0003082,1.10e-09,62;UBERON:0005383,1.65e-09,3;UBERON:0005382,1.65e-09,3;UBERON:0002385,2.94e-09,64;UBERON:0001015,2.94e-09,64;UBERON:0000383,2.94e-09,64;UBERON:0001135,1.06e-08,15;UBERON:0004535,1.27e-08,109;UBERON:0002298,1.34e-08,6;UBERON:0007023,2.91e-08,114;UBERON:0000486,3.29e-08,83;UBERON:0002329,5.78e-08,71;UBERON:0003059,5.78e-08,71;UBERON:0007282,5.78e-08,71;UBERON:0004290,5.78e-08,71;UBERON:0009618,5.78e-08,71;UBERON:0003077,8.41e-08,72;UBERON:0007285,8.41e-08,72;UBERON:0000947,9.45e-08,21;UBERON:0010191,9.45e-08,21;UBERON:0007524,1.21e-07,73;UBERON:0000483,1.39e-07,306;UBERON:0002148,1.50e-07,2;UBERON:0006331,1.50e-07,2;UBERON:0009662,1.50e-07,2;UBERON:0005396,1.75e-07,2;UBERON:0000119,2.03e-07,309;UBERON:0000369,3.14e-07,4;UBERON:0002435,3.14e-07,4;UBERON:0000204,3.14e-07,4;UBERON:0010082,3.14e-07,4;UBERON:0003513,4.17e-07,7;UBERON:0001873,4.45e-07,2;UBERON:0010122,4.45e-07,2;UBERON:0009663,5.50e-07,7;UBERON:0007503,6.48e-07,78;UBERON:0003076,7.16e-07,15;UBERON:0003057,7.16e-07,15;UBERON:0003914,9.17e-07,117 | |||
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|short_description=p6@SLC39A14 | |short_description=p6@SLC39A14 | ||
}} | }} |
Latest revision as of 11:01, 17 September 2015
Short description: | p6@SLC39A14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC39A14_5end |
Coexpression cluster: | C4742_skeletal_Mesothelial_heart_mature_mesenchymal_caudate_left |
Association with transcript: | 47bp_to_ENST00000520832_5end |
EntrezGene: | SLC39A14 |
HGNC: | 20858 |
UniProt: | E5RFF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.09e-19 | 32 |
smooth muscle cell | 1.21e-13 | 43 |
smooth muscle myoblast | 1.21e-13 | 43 |
aortic smooth muscle cell | 1.46e-13 | 10 |
smooth muscle cell of the subclavian artery | 5.97e-10 | 5 |
muscle cell | 7.62e-10 | 55 |
muscle precursor cell | 3.80e-09 | 58 |
myoblast | 3.80e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.80e-09 | 58 |
electrically responsive cell | 1.61e-08 | 61 |
electrically active cell | 1.61e-08 | 61 |
mesodermal cell | 3.61e-08 | 121 |
smooth muscle cell of the carotid artery | 1.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.29e-07 | 14 |