FFCP PHASE1:Hg19::chr15:40697988..40698033,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3712 | |EntrezGene=3712 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6186 | |HGNC=6186 | ||
|TSSclassifier=strong | |||
|UniProt=B3KVI7,P26440 | |UniProt=B3KVI7,P26440 | ||
|association_with_transcript=0bp_to_ENST00000479013,ENST00000487418,ENST00000490194_5end | |association_with_transcript=0bp_to_ENST00000479013,ENST00000487418,ENST00000490194_5end | ||
|cluster_id=chr15:40697988..40698033,+ | |||
|description=CAGE_peak_1_at_IVD_5end | |description=CAGE_peak_1_at_IVD_5end | ||
|id=chr15:40697988..40698033,+ | |id=chr15:40697988..40698033,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.06e-14!57;UBERON:0005068!5.06e-14!57;UBERON:0006241!5.06e-14!57;UBERON:0007135!5.06e-14!57;UBERON:0002616!9.16e-13!59;UBERON:0003075!1.86e-12!86;UBERON:0007284!1.86e-12!86;UBERON:0002346!3.59e-12!90;UBERON:0000475!6.24e-12!365;UBERON:0000025!1.04e-11!194;UBERON:0005743!2.29e-11!86;UBERON:0007023!2.32e-11!115;UBERON:0000073!1.46e-10!94;UBERON:0001016!1.46e-10!94;UBERON:0001017!1.74e-10!82;UBERON:0002780!2.79e-10!41;UBERON:0001890!2.79e-10!41;UBERON:0006240!2.79e-10!41;UBERON:0000955!3.41e-10!69;UBERON:0006238!3.41e-10!69;UBERON:0003080!6.87e-10!42;UBERON:0004111!1.39e-09!241;UBERON:0003056!2.69e-09!61;UBERON:0000483!1.52e-08!309;UBERON:0000481!1.74e-08!347;UBERON:0000119!2.25e-08!312;UBERON:0002020!1.11e-07!34;UBERON:0003528!1.11e-07!34;UBERON:0001893!1.37e-07!34;UBERON:0000477!1.53e-07!286;UBERON:0002791!1.71e-07!33;UBERON:0000033!6.06e-07!123;UBERON:0001869!6.18e-07!32 | |ontology_enrichment_uberon=UBERON:0001049!5.06e-14!57;UBERON:0005068!5.06e-14!57;UBERON:0006241!5.06e-14!57;UBERON:0007135!5.06e-14!57;UBERON:0002616!9.16e-13!59;UBERON:0003075!1.86e-12!86;UBERON:0007284!1.86e-12!86;UBERON:0002346!3.59e-12!90;UBERON:0000475!6.24e-12!365;UBERON:0000025!1.04e-11!194;UBERON:0005743!2.29e-11!86;UBERON:0007023!2.32e-11!115;UBERON:0000073!1.46e-10!94;UBERON:0001016!1.46e-10!94;UBERON:0001017!1.74e-10!82;UBERON:0002780!2.79e-10!41;UBERON:0001890!2.79e-10!41;UBERON:0006240!2.79e-10!41;UBERON:0000955!3.41e-10!69;UBERON:0006238!3.41e-10!69;UBERON:0003080!6.87e-10!42;UBERON:0004111!1.39e-09!241;UBERON:0003056!2.69e-09!61;UBERON:0000483!1.52e-08!309;UBERON:0000481!1.74e-08!347;UBERON:0000119!2.25e-08!312;UBERON:0002020!1.11e-07!34;UBERON:0003528!1.11e-07!34;UBERON:0001893!1.37e-07!34;UBERON:0000477!1.53e-07!286;UBERON:0002791!1.71e-07!33;UBERON:0000033!6.06e-07!123;UBERON:0001869!6.18e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.30e-08;53!UBERON:0002616;4.30e-08;53!UBERON:0002780;8.23e-08;41!UBERON:0001890;8.23e-08;41!UBERON:0003528;6.81e-07;34!UBERON:0002020;6.81e-07;34!UBERON:0001893;8.10e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.94e-14,56;UBERON:0005068,1.94e-14,56;UBERON:0006241,1.94e-14,56;UBERON:0007135,1.94e-14,56;UBERON:0003075,3.36e-14,82;UBERON:0007284,3.36e-14,82;UBERON:0002346,7.78e-14,86;UBERON:0000073,1.05e-13,53;UBERON:0002616,1.05e-13,53;UBERON:0010314,1.51e-12,132;UBERON:0000025,1.02e-11,192;UBERON:0007023,2.33e-11,114;UBERON:0001017,9.83e-11,81;UBERON:0010371,1.30e-10,104;UBERON:0000955,1.81e-10,68;UBERON:0006238,1.81e-10,68;UBERON:0002780,2.79e-10,41;UBERON:0001890,2.79e-10,41;UBERON:0003080,2.79e-10,41;UBERON:0006240,2.79e-10,41;UBERON:0003056,4.72e-10,61;UBERON:0001016,6.22e-10,89;UBERON:0004111,1.53e-09,240;UBERON:0000483,1.81e-09,306;UBERON:0000119,2.77e-09,309;UBERON:0003528,1.11e-07,34;UBERON:0002020,1.11e-07,34;UBERON:0001893,1.37e-07,34;UBERON:0002791,4.71e-07,32;UBERON:0001869,6.18e-07,32 | |||
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| ||
|short_description=p1@IVD | |short_description=p1@IVD | ||
}} | }} |
Latest revision as of 13:17, 17 September 2015
Short description: | p1@IVD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IVD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000479013, ENST00000487418, ENST00000490194_5end |
EntrezGene: | IVD |
HGNC: | 6186 |
UniProt: | B3KVI7P26440 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.94e-14 | 56 |
neural rod | 1.94e-14 | 56 |
future spinal cord | 1.94e-14 | 56 |
neural keel | 1.94e-14 | 56 |
neural plate | 3.36e-14 | 82 |
presumptive neural plate | 3.36e-14 | 82 |
neurectoderm | 7.78e-14 | 86 |
regional part of nervous system | 1.05e-13 | 53 |
regional part of brain | 1.05e-13 | 53 |
structure with developmental contribution from neural crest | 1.51e-12 | 132 |
tube | 1.02e-11 | 192 |
adult organism | 2.33e-11 | 114 |
central nervous system | 9.83e-11 | 81 |
ecto-epithelium | 1.30e-10 | 104 |
brain | 1.81e-10 | 68 |
future brain | 1.81e-10 | 68 |
regional part of forebrain | 2.79e-10 | 41 |
forebrain | 2.79e-10 | 41 |
anterior neural tube | 2.79e-10 | 41 |
future forebrain | 2.79e-10 | 41 |
pre-chordal neural plate | 4.72e-10 | 61 |
nervous system | 6.22e-10 | 89 |
anatomical conduit | 1.53e-09 | 240 |
epithelium | 1.81e-09 | 306 |
cell layer | 2.77e-09 | 309 |
brain grey matter | 1.11e-07 | 34 |
gray matter | 1.11e-07 | 34 |
telencephalon | 1.37e-07 | 34 |
regional part of telencephalon | 4.71e-07 | 32 |
cerebral hemisphere | 6.18e-07 | 32 |