FFCP PHASE1:Hg19::chr12:15101798..15101847,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=397 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=679 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000539131,uc001rcp.1_5end | |||
|cluster_id=chr12:15101798..15101847,- | |||
|description=CAGE_peak_2_at_ARHGDIB_5end | |||
|id=chr12:15101798..15101847,- | |||
|ontology_enrichment_celltype=CL:0000048!3.85e-18!430;CL:0002371!8.27e-18!591;CL:0000144!3.70e-17!625;CL:0000723!2.21e-16!436;CL:0000034!3.44e-16!444;CL:0000222!1.67e-13!119;CL:0002139!6.33e-12!24;CL:0000988!4.86e-11!182;CL:0000359!3.36e-10!32;CL:0002032!4.72e-10!165;CL:0000837!4.72e-10!165;CL:0000134!7.49e-10!358;CL:0000115!1.86e-09!35;CL:0000037!2.13e-09!172;CL:0000566!2.13e-09!172;CL:0000071!3.63e-09!18;CL:0002546!3.63e-09!18;CL:0002320!6.52e-09!365;CL:0000192!7.96e-09!42;CL:0000514!7.96e-09!42;CL:0000003!2.02e-08!722;CL:0000763!2.41e-08!112;CL:0000049!2.41e-08!112;CL:0000012!4.86e-08!682;CL:0002078!1.29e-07!44;CL:0000548!1.51e-07!679;CL:0000004!1.51e-07!679;CL:0000255!1.51e-07!679;CL:0000738!5.56e-07!140;CL:0000680!5.72e-07!57;CL:0000056!5.72e-07!57;CL:0000355!5.72e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.39e-12;24!CL:0000071;1.61e-09;18!CL:0000359;1.77e-09;32!CL:0000115;8.47e-09;36!CL:0000860;5.93e-08;33!CL:0002057;5.93e-08;33!CL:0000473;3.30e-07;39!CL:0000234;3.30e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.11e-18,427;CL:0000723,1.09e-16,433;CL:0000034,1.38e-16,441;CL:0000222,1.54e-13,121;CL:0002139,2.20e-12,24;CL:0000988,2.26e-12,177;CL:0002032,1.50e-11,161;CL:0000837,1.50e-11,161;CL:0000037,8.58e-11,168;CL:0000115,2.78e-10,36;CL:0000359,2.84e-10,32;CL:0000134,4.08e-10,354;CL:0000763,5.79e-10,108;CL:0000049,5.79e-10,108;CL:0000071,1.67e-09,18;CL:0002546,1.67e-09,18;CL:0002320,3.46e-09,361;CL:0000192,1.94e-08,43;CL:0000514,1.94e-08,43;CL:0002078,2.12e-08,45;CL:0000738,6.17e-08,136;CL:0002087,2.96e-07,115;CL:0000766,4.09e-07,72;CL:0002031,4.29e-07,120;CL:0000473,4.37e-07,48;CL:0000234,4.37e-07,48;CL:0002194,7.89e-07,59;CL:0000576,7.89e-07,59;CL:0000040,7.89e-07,59;CL:0000559,7.89e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002546;1.61e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!8.17e-10!51;DOID:0060083!8.17e-10!51;DOID:1240!3.66e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;9.07e-07;51!DOID:0060083;9.07e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.15e-10,51;DOID:0060083,2.15e-10,51;DOID:1240,1.10e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0003081!5.44e-27!216;UBERON:0004535!2.04e-22!110;UBERON:0001009!3.65e-21!113;UBERON:0002049!4.67e-21!79;UBERON:0007798!4.67e-21!79;UBERON:0000055!1.25e-20!69;UBERON:0004872!1.95e-18!84;UBERON:0001981!3.70e-18!60;UBERON:0007500!3.70e-18!60;UBERON:0004537!3.70e-18!60;UBERON:0006965!3.70e-18!60;UBERON:0003914!3.66e-14!118;UBERON:0001637!2.35e-13!42;UBERON:0003509!2.35e-13!42;UBERON:0004572!2.35e-13!42;UBERON:0004573!7.36e-10!33;UBERON:0004571!7.36e-10!33;UBERON:0001986!3.63e-09!18;UBERON:0004638!3.63e-09!18;UBERON:0004852!3.63e-09!18;UBERON:0002193!4.48e-09!112;UBERON:0000487!1.87e-08!22;UBERON:0000490!2.96e-08!138;UBERON:0002384!3.34e-08!375;UBERON:0002390!5.19e-07!102;UBERON:0003061!5.19e-07!102;UBERON:0000947!7.95e-07!21;UBERON:0010191!7.95e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;1.11e-10;56!UBERON:0001981;1.11e-10;56!UBERON:0004537;1.11e-10;56!UBERON:0000055;1.83e-10;65!UBERON:0001637;7.39e-10;42!UBERON:0003509;7.39e-10;42!UBERON:0004572;7.39e-10;42!UBERON:0003914;1.43e-09;74!UBERON:0004638;1.61e-09;18!UBERON:0001986;1.61e-09;18!UBERON:0004852;1.61e-09;18!UBERON:0002049;2.23e-09;75!UBERON:0007798;2.23e-09;75!UBERON:0000487;6.35e-09;22!UBERON:0004573;9.82e-09;33!UBERON:0004571;9.82e-09;33!UBERON:0000490;4.70e-07;33!UBERON:0001009;8.76e-07;112!UBERON:0004535;9.07e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.13e-28,203;UBERON:0004535,1.57e-22,109;UBERON:0002049,3.34e-21,78;UBERON:0007798,3.34e-21,78;UBERON:0001009,1.24e-20,112;UBERON:0000055,1.50e-20,68;UBERON:0000926,1.58e-18,315;UBERON:0004120,1.58e-18,315;UBERON:0006603,1.58e-18,315;UBERON:0004872,4.05e-18,83;UBERON:0007500,5.61e-18,59;UBERON:0001981,5.61e-18,59;UBERON:0004537,5.61e-18,59;UBERON:0006965,5.61e-18,59;UBERON:0003914,2.60e-15,117;UBERON:0001637,2.87e-13,42;UBERON:0003509,2.87e-13,42;UBERON:0004572,2.87e-13,42;UBERON:0002193,1.45e-10,108;UBERON:0004573,1.18e-09,33;UBERON:0004571,1.18e-09,33;UBERON:0004638,1.67e-09,18;UBERON:0001986,1.67e-09,18;UBERON:0004852,1.67e-09,18;UBERON:0002405,2.24e-09,93;UBERON:0000487,5.83e-09,22;UBERON:0002384,2.70e-08,371;UBERON:0002390,2.83e-08,98;UBERON:0003061,2.83e-08,98;UBERON:0000490,3.16e-08,148;UBERON:0000947,8.75e-07,21;UBERON:0010191,8.75e-07,21 | |||
|phase1_expression=5.26867299884614,4.71021152560163,12.5449419645414,8.00586386825043,13.8557939272459,14.8297549097063,5.06599756336621,3.79031924056099,0.522371256399677,9.82935746006035,9.76921635161399,2.62129646556207,2.90143676051299,0.247532705920093,0,22.1867298329086,18.6835303687433,18.9880623500717,11.7103871709722,2.58554221961255,1.22400414746552,0.940364164434263,1.71741592278634,1.36874425072884,3.26410862946487,111.639985797757,140.884611496107,123.418505099849,1.96682138424452,1.15148819429164,0.464448369948228,1.83884244895785,1.50602959389125,1.10926203050036,3.25362242437267,11.3735385989937,15.2672228454121,2.21598163412751,0.401088894940283,0.651032612147555,0.223915474239924,0.32389366601898,0,5.37973483484389,4.53451132426571,3.39617685662943,22.5456165798514,10.2791972005456,11.4591357231188,18.9876978932619,11.2710710872804,6.85798466676897,12.4108445065183,5.16387746867061,8.12558919566051,9.22387463758763,5.18521685109907,13.7081325511502,33.3631442684284,23.4278189765548,12.1474053901818,2.30895910130701,1.39624560335142,2.13112375266347,68.4893803163458,36.3126543802329,28.6498234537965,8.29120595347253,4.69334626578181,8.25317609879443,36.3239701580021,35.7229306907938,38.291948880347,1.47878700418359,1.27562579979026,1.46761051855863,0.22465726229299,0.450530678524519,0,2.28010194992999,2.98375015798635,3.28795476776341,1.75996244461323,0,0,0,0.800791974072025,0.574752439954483,0,0,0,1.17447437874188,0.382273228125229,7.93027971474155,2.80254281490768,7.37475437370216,0.983548850569165,1.17903228824749,1.85041349099558,5.18278135711102,3.91106719960308,4.73447805734733,5.84480185223734,8.0215528957325,2.65145316727353,3.76607620792156,5.95768500283034,6.02029202710673,5.59255194507476,3.78207180588455,3.31620021343018,4.05724320029073,3.85545064221357,2.40786745280742,1.04535523804977,7.47841661803937,3.83220493601921,4.81078423675682,1.01207876807801,3.18565414324097,5.20866763085135,4.75226022224187,3.46322773878877,3.4556385011693,2.49861453104692,4.02521328474829,0.821127996921047,2.01606743224732,1.33720097891754,1.59306844271079,0,13.4140171940727,6.13740296848946,0.722878304769133,3.00802746381534,1.15877215168659,3.1811437882044,0.486634870302636,6.99557647014102,10.4212816807405,10.8036786402545,1.57174890597255,0.728590576585084,1.48313777113772,11.0346113842592,10.9701734498538,5.45127638127347,0,0,0,16.4972798114365,13.763753521698,11.8027770546582,10.1755429546322,9.22898759661793,20.6338531455051,8.56879362800923,12.9208379584664,4.98072767761394,21.4221192169389,24.572588343658,20.5273468543998,20.7452748915944,14.7065232138347,18.6332648012805,12.1447630466348,4.26605807989723,5.63057402416611,22.9974956198825,18.9853131913626,14.839341258363,3.9534125230819,3.87780264148325,1.74437620857014,5.4666914686485,8.23098325819768,2.38336525463794,0.860509862246441,2.12801029319014,12.3349072031308,24.5522690178321,14.3067178081953,5.91300967259556,3.50247747381189,6.70193802765181,4.8434376846378,2.30470369792,1.17160715916898,2.18512053781224,1.71141546463335,0.896692083310806,0.352303495931295,0.323745888736263,0.421352420106746,0.204154171254893,0.368502951935304,0.103325781175765,0,0.989067717114227,4.55080680969013,2.87447256726495,0.673344455816265,0.125118519871964,1.10825646193673,0.438977620880838,3.0648779579902,0.600952235626387,14.2924550781627,3.04962380671065,2.34913127700424,8.68920794754204,3.60109315301283,3.60683852334536,2.06112432036503,5.58350568994769,3.54430297706659,11.4001296038602,2.77677151668526,3.03764665519588,1.61646056818812,2.84007674013291,11.1834829032681,8.64759020783487,2.12586938479627,2.72746120590835,0.860413786167011,0.121973706129595,0,1.51052125730374,1.96956004529204,1.51392510525377,0.36497735907583,14.0804579096834,9.00537313470039,9.66944449467364,5.10804720835177,2.88751792667834,0.236613600079688,0.168584690078102,0,0.441175890929576,0.871517776369625,0,0,0.588664395376038,0,7.38155454624648,15.426595118379,9.0546282492908,4.41026134156626,0,1.96565443335525,1.18157981336281,41.9389944443918,4.18160691046586,10.8087720488071,0.109750285408626,0,0.402115889646523,0.740707561268237,0,0,18.7630744632855,2.31860809950154,11.5060520351105,35.225413253702,27.31614524202,15.4105863310025,0,0.858486162094873,1.72351904261178,14.9762729689112,4.16167254408439,6.56136837907439,1.00789276919316,4.67857820899875,1.16426079513703,1.16253575405585,1.53353071666084,3.94130590316755,4.4024217006613,5.80518723514162,2.45003920808834,2.14612136824846,0.63497894292169,1.14596527667483,0,0,1.43958489784653,0,0.571652865261156,7.28852048244845,5.66748089483264,8.43390286940925,9.82465039759111,3.57656445851882,6.762422020448,18.0837919277712,12.4808924293639,2.05765899409714,0,3.99633268524149,6.57698770827479,0,6.58592269424615,7.81766842304964,2.84313558994037,8.71147060226772,1.20575750823834,5.22920075160176,1.89948683245908,4.86495122564762,3.51579964002488,14.7583757638122,8.38686994220539,4.59447743336456,0,16.0707250401013,2.8766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| |||
|short_description=p2@ARHGDIB | |||
}} |
Latest revision as of 14:22, 17 September 2015
Short description: | p2@ARHGDIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGDIB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539131, uc001rcp.1_5end |
EntrezGene: | ARHGDIB |
HGNC: | 679 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.11e-18 | 427 |
somatic stem cell | 1.09e-16 | 433 |
stem cell | 1.38e-16 | 441 |
mesodermal cell | 1.54e-13 | 121 |
endothelial cell of vascular tree | 2.20e-12 | 24 |
hematopoietic cell | 2.26e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.50e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-11 | 161 |
hematopoietic stem cell | 8.58e-11 | 168 |
endothelial cell | 2.78e-10 | 36 |
vascular associated smooth muscle cell | 2.84e-10 | 32 |
mesenchymal cell | 4.08e-10 | 354 |
myeloid cell | 5.79e-10 | 108 |
common myeloid progenitor | 5.79e-10 | 108 |
blood vessel endothelial cell | 1.67e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.67e-09 | 18 |
connective tissue cell | 3.46e-09 | 361 |
smooth muscle cell | 1.94e-08 | 43 |
smooth muscle myoblast | 1.94e-08 | 43 |
meso-epithelial cell | 2.12e-08 | 45 |
leukocyte | 6.17e-08 | 136 |
nongranular leukocyte | 2.96e-07 | 115 |
myeloid leukocyte | 4.09e-07 | 72 |
hematopoietic lineage restricted progenitor cell | 4.29e-07 | 120 |
defensive cell | 4.37e-07 | 48 |
phagocyte | 4.37e-07 | 48 |
monopoietic cell | 7.89e-07 | 59 |
monocyte | 7.89e-07 | 59 |
monoblast | 7.89e-07 | 59 |
promonocyte | 7.89e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.13e-28 | 203 |
cardiovascular system | 1.57e-22 | 109 |
vasculature | 3.34e-21 | 78 |
vascular system | 3.34e-21 | 78 |
circulatory system | 1.24e-20 | 112 |
vessel | 1.50e-20 | 68 |
mesoderm | 1.58e-18 | 315 |
mesoderm-derived structure | 1.58e-18 | 315 |
presumptive mesoderm | 1.58e-18 | 315 |
splanchnic layer of lateral plate mesoderm | 4.05e-18 | 83 |
epithelial tube open at both ends | 5.61e-18 | 59 |
blood vessel | 5.61e-18 | 59 |
blood vasculature | 5.61e-18 | 59 |
vascular cord | 5.61e-18 | 59 |
epithelial tube | 2.60e-15 | 117 |
artery | 2.87e-13 | 42 |
arterial blood vessel | 2.87e-13 | 42 |
arterial system | 2.87e-13 | 42 |
hemolymphoid system | 1.45e-10 | 108 |
systemic artery | 1.18e-09 | 33 |
systemic arterial system | 1.18e-09 | 33 |
blood vessel endothelium | 1.67e-09 | 18 |
endothelium | 1.67e-09 | 18 |
cardiovascular system endothelium | 1.67e-09 | 18 |
immune system | 2.24e-09 | 93 |
simple squamous epithelium | 5.83e-09 | 22 |
connective tissue | 2.70e-08 | 371 |
hematopoietic system | 2.83e-08 | 98 |
blood island | 2.83e-08 | 98 |
unilaminar epithelium | 3.16e-08 | 148 |
aorta | 8.75e-07 | 21 |
aortic system | 8.75e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.15e-10 | 51 |
immune system cancer | 2.15e-10 | 51 |
leukemia | 1.10e-07 | 39 |