FFCP PHASE1:Hg19::chr6:29691484..29691495,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:29691484..29691495,+ to FFCP PHASE1:Hg19::chr6:29691484..29691495,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3134 | |EntrezGene=3134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4963 | |HGNC=4963 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_uc011dly.1_5end | |||
|cluster_id=chr6:29691484..29691495,+ | |||
|coexpression_cluster_id=C500 | |||
|description=CAGE_peak_3_at_HLA-F_5end | |||
|id=chr6:29691484..29691495,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.64e-50!140;CL:0002087!3.67e-49!119;CL:0002031!3.74e-44!124;CL:0002057!1.38e-37!42;CL:0000037!5.15e-34!172;CL:0000566!5.15e-34!172;CL:0002032!7.25e-34!165;CL:0000837!7.25e-34!165;CL:0000860!7.62e-34!45;CL:0000988!1.21e-32!182;CL:0000766!1.62e-28!76;CL:0002194!3.01e-28!63;CL:0000576!3.01e-28!63;CL:0000040!3.01e-28!63;CL:0000559!3.01e-28!63;CL:0002009!4.35e-28!65;CL:0000557!3.84e-25!71;CL:0000839!1.41e-24!70;CL:0000838!1.75e-18!52;CL:0000542!7.27e-18!53;CL:0000051!7.27e-18!53;CL:0000763!3.77e-16!112;CL:0000049!3.77e-16!112;CL:0000791!2.95e-11!18;CL:0000789!2.95e-11!18;CL:0002420!2.95e-11!18;CL:0002419!2.95e-11!18;CL:0000790!2.95e-11!18;CL:0000084!8.52e-11!25;CL:0000827!8.52e-11!25;CL:0000625!1.46e-08!11;CL:0000134!1.61e-07!358;CL:0000945!3.96e-07!24;CL:0000826!3.96e-07!24;CL:0002393!6.03e-07!9;CL:0002397!6.03e-07!9;CL:0000236!6.48e-07!14;CL:0002320!7.76e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.26e-55;33!CL:0002057;1.26e-55;33!CL:0000473;3.11e-40;39!CL:0000234;3.11e-40;39!CL:0000576;1.98e-37;48!CL:0000766;2.95e-24;69!CL:0002087;5.86e-19;104!CL:0000738;5.90e-15;136!CL:0000625;1.19e-12;11!CL:0000791;2.93e-11;18!CL:0000789;2.93e-11;18!CL:0002419;2.93e-11;18!CL:0000763;5.49e-10;100!CL:0000988;3.65e-09;177!CL:0000236;6.67e-08;13!CL:0000875;8.93e-08;3!CL:0002396;8.93e-08;3!CL:0000084;1.60e-07;25!CL:0000542;2.30e-07;53!CL:0000219;5.05e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.79e-71,42;CL:0002057,1.79e-71,42;CL:0000473,1.23e-64,48;CL:0000234,1.23e-64,48;CL:0002087,4.23e-56,115;CL:0000738,6.24e-55,136;CL:0002194,3.61e-52,59;CL:0000576,3.61e-52,59;CL:0000040,3.61e-52,59;CL:0000559,3.61e-52,59;CL:0002031,6.89e-51,120;CL:0002009,4.14e-50,61;CL:0000766,7.18e-46,72;CL:0000839,1.68e-45,66;CL:0000557,1.16e-44,67;CL:0002032,4.36e-42,161;CL:0000837,4.36e-42,161;CL:0000037,2.19e-41,168;CL:0000988,1.86e-38,177;CL:0000763,1.58e-31,108;CL:0000049,1.58e-31,108;CL:0000134,1.15e-12,354;CL:0000625,2.63e-12,11;CL:0002320,4.07e-12,361;CL:0002393,1.21e-11,9;CL:0002397,1.21e-11,9;CL:0000791,5.48e-11,18;CL:0000789,5.48e-11,18;CL:0002420,5.48e-11,18;CL:0002419,5.48e-11,18;CL:0000790,5.48e-11,18;CL:0000219,3.40e-10,386;CL:0000838,6.02e-10,52;CL:0000542,1.12e-09,53;CL:0000051,1.12e-09,53;CL:0000048,2.15e-08,427;CL:0000723,4.55e-08,433;CL:0000034,1.19e-07,441;CL:0000875,1.34e-07,3;CL:0002396,1.34e-07,3;CL:0000084,2.44e-07,25;CL:0000827,2.44e-07,25;CL:0000236,3.09e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;9.99e-51;42!CL:0000790;2.93e-11;18!CL:0000049;2.20e-10;108!CL:0000051;2.30e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.28e-31!102;UBERON:0003061!3.28e-31!102;UBERON:0002193!7.87e-29!112;UBERON:0002371!2.63e-22!80;UBERON:0001474!2.17e-19!86;UBERON:0002405!7.11e-16!115;UBERON:0004765!1.96e-14!101;UBERON:0001434!1.96e-14!101;UBERON:0000178!2.90e-08!15;UBERON:0000179!2.90e-08!15;UBERON:0000463!2.90e-08!15;UBERON:0003081!3.17e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.34e-42,98;UBERON:0003061,2.34e-42,98;UBERON:0002371,1.86e-40,76;UBERON:0002193,3.08e-37,108;UBERON:0001474,1.11e-36,82;UBERON:0002405,6.00e-33,93;UBERON:0004765,1.98e-32,90;UBERON:0001434,4.47e-28,100;UBERON:0003081,8.87e-15,203;UBERON:0002204,2.26e-13,167;UBERON:0002384,2.27e-11,371 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.164201178899891,0.472264687882075,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0,1.20326668482085,1.51907609501096,0,0,0.77272670290256,1.59938062657521,1.88937971844405,1.4555043671269,3.25400651667958,1.23350366406548,3.71647645074124,4.31538588483226,2.56160706529101,8.98632473576624,1.72372840368309,0.645484683583826,2.70852973188684,2.25890807451126,0.545812300115692,3.82029923556644,5.81559395504715,1.92557416245656,3.19668562899521,3.62836430205388,1.39624560335142,2.98357325372886,5.80418477257168,2.8369261234557,3.73693349397345,2.26123798731069,3.12889751052121,4.56096573880745,4.23779651843358,1.10483290796269,10.7597211729901,1.47878700418359,1.91343869968539,0.628975936525128,1.23561494261145,1.50176892841506,0.48217676009124,1.42506371870624,3.9783335439818,1.0959849225878,3.51992488922645,0.546138611262131,0.889509253863555,1.70692089026603,1.60158394814405,2.29900975981793,0,0.954053754535364,1.1384259382189,1.17447437874188,1.52909291250092,0,0,0,0.196709770113833,0.393010762749165,0.822405995998037,1.33749196312542,0.32592226663359,1.89379122293893,1.94826728407911,1.00269411196656,1.47302953737419,1.77227115666897,2.43723477388514,1.66518715643378,1.56071217071854,0.328875809207352,0.552700035571697,1.15921234294021,1.63115219478266,2.67540828089713,0,0.113309342697566,2.29932296161153,1.03088233644789,1.77113784413652,2.54852331459277,1.30216690771284,3.8018081777935,1.20460095262218,1.02389288923535,0,0.947109008176067,3.28451198768419,0.604820229674197,1.87208137048455,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.97364218096405,0.174129737299267,1.32957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.206105058476878,0,0.37223371266318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,1.50677127429638,0,0,0,0,0,0,0,0,0.788123040807709,2.80315847317372,0.898401253958239,0,0,0,0,0,1.49801404789436,8.97484377612075,0.414415513436035,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,2.5885704098234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0.200506470303285,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,1.52927441428475,3.41788312304498,1.19115887728894,0.411362273086194,0.648473311192717,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0.16480387422676,0,0,0.828851746593443,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0,0,0,0.442287822516696,0,0.296521128680622,0.370691816839509,0.208843899010911,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0,0,0,0,0.586654148204409,0.320635281006135,0.426905989478705,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0.279282401272254,0,0,0,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,0.896436696664224,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,2.66943366478961,0,0,0,0,0.159296767163702,0.899606224327209,0,0,0,0,0,0.380805212168795,0,0,0,0,0.796191777397232,0,0,0,0,0.385239660814607,0,0.521988583930423,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0.303859956177382,0,1.36402216187572,1.19578356282027,1.4720885483026,3.93131818615695,0,0.211312123358627,0.79994958341972,0.320075189082423,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0.546974809018219,0.548257766857182,0,0,0.255524855279191,0,0.336283722218824,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.93061915699296,0,0,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0.118920090777569,0,0,0.452888530700021,0.308696632431779,0,4.70317296361523,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0.0999411559249289,0.357107877211315,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0.641136984606466 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.164201178899891,0.472264687882075,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0,1.20326668482085,1.51907609501096,0,0,0.77272670290256,1.59938062657521,1.88937971844405,1.4555043671269,3.25400651667958,1.23350366406548,3.71647645074124,4.31538588483226,2.56160706529101,8.98632473576624,1.72372840368309,0.645484683583826,2.70852973188684,2.25890807451126,0.545812300115692,3.82029923556644,5.81559395504715,1.92557416245656,3.19668562899521,3.62836430205388,1.39624560335142,2.98357325372886,5.80418477257168,2.8369261234557,3.73693349397345,2.26123798731069,3.12889751052121,4.56096573880745,4.23779651843358,1.10483290796269,10.7597211729901,1.47878700418359,1.91343869968539,0.628975936525128,1.23561494261145,1.50176892841506,0.48217676009124,1.42506371870624,3.9783335439818,1.0959849225878,3.51992488922645,0.546138611262131,0.889509253863555,1.70692089026603,1.60158394814405,2.29900975981793,0,0.954053754535364,1.1384259382189,1.17447437874188,1.52909291250092,0,0,0,0.196709770113833,0.393010762749165,0.822405995998037,1.33749196312542,0.32592226663359,1.89379122293893,1.94826728407911,1.00269411196656,1.47302953737419,1.77227115666897,2.43723477388514,1.66518715643378,1.56071217071854,0.328875809207352,0.552700035571697,1.15921234294021,1.63115219478266,2.67540828089713,0,0.113309342697566,2.29932296161153,1.03088233644789,1.77113784413652,2.54852331459277,1.30216690771284,3.8018081777935,1.20460095262218,1.02389288923535,0,0.947109008176067,3.28451198768419,0.604820229674197,1.87208137048455,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.97364218096405,0.174129737299267,1.32957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.206105058476878,0,0.37223371266318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,1.50677127429638,0,0,0,0,0,0,0,0,0.788123040807709,2.80315847317372,0.898401253958239,0,0,0,0,0,1.49801404789436,8.97484377612075,0.414415513436035,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,2.5885704098234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0.200506470303285,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,1.52927441428475,3.41788312304498,1.19115887728894,0.411362273086194,0.648473311192717,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0.16480387422676,0,0,0.828851746593443,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0.326465616318295,0,0,0,0.442287822516696,0,0.296521128680622,0.370691816839509,0.208843899010911,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0,0,0,0,0.586654148204409,0.320635281006135,0.426905989478705,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0.279282401272254,0,0,0,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,0.896436696664224,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,2.66943366478961,0,0,0,0,0.159296767163702,0.899606224327209,0,0,0,0,0,0.380805212168795,0,0,0,0,0.796191777397232,0,0,0,0,0.385239660814607,0,0.521988583930423,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0.303859956177382,0,1.36402216187572,1.19578356282027,1.4720885483026,3.93131818615695,0,0.211312123358627,0.79994958341972,0.320075189082423,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0.546974809018219,0.548257766857182,0,0,0.255524855279191,0,0.336283722218824,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.93061915699296,0,0,0.098150233615243,0,0,0,0,0,0,0.397901550322736,0.118920090777569,0,0,0.452888530700021,0.308696632431779,0,4.70317296361523,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0.0999411559249289,0.357107877211315,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,0.641136984606466 | ||
|short_description=p3@HLA-F | |||
}} | }} |
Latest revision as of 14:25, 17 September 2015
Short description: | p3@HLA-F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HLA-F_5end |
Coexpression cluster: | C500_Neutrophils_Monocytederived_blood_CD14_Eosinophils_lung_mixed |
Association with transcript: | 49bp_to_uc011dly.1_5end |
EntrezGene: | HLA-F |
HGNC: | 4963 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.34e-42 | 98 |
blood island | 2.34e-42 | 98 |
bone marrow | 1.86e-40 | 76 |
hemolymphoid system | 3.08e-37 | 108 |
bone element | 1.11e-36 | 82 |
immune system | 6.00e-33 | 93 |
skeletal element | 1.98e-32 | 90 |
skeletal system | 4.47e-28 | 100 |
lateral plate mesoderm | 8.87e-15 | 203 |
musculoskeletal system | 2.26e-13 | 167 |
connective tissue | 2.27e-11 | 371 |