FFCP PHASE1:Hg19::chr1:33219575..33219586,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:33219575..33219586,+ to FFCP PHASE1:Hg19::chr1:33219575..33219586,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57648 | |EntrezGene=57648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29301 | |HGNC=29301 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000468130_5end | |||
|cluster_id=chr1:33219575..33219586,+ | |||
|coexpression_cluster_id=C3971 | |||
|description=CAGE_peak_4_at_KIAA1522_5end | |||
|id=chr1:33219575..33219586,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.84e-18!254;CL:0002076!4.05e-10!43;CL:0002368!5.01e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.91e-09;42!CL:0002368;7.30e-08;13!CL:0000163;4.67e-07;9!CL:0002202;8.84e-07;9!CL:0002632;8.84e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.07e-19,253;CL:0002076,1.49e-13,42;CL:0000223,3.03e-09,58;CL:0002368,2.66e-08,13;CL:0000076,8.52e-08,63;CL:0002202,3.99e-07,9;CL:0002632,3.99e-07,9;CL:0000163,5.42e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.09e-12!143;DOID:305!6.13e-12!106;DOID:299!9.92e-08!25;DOID:162!1.36e-07!235;DOID:14566!5.10e-07!239;DOID:1749!8.68e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.88e-09;14!DOID:299;1.44e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.29e-14,106;DOID:0050687,9.30e-12,143;DOID:1749,1.29e-09,14;DOID:299,1.16e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004121!1.01e-15!169;UBERON:0000924!4.46e-15!173;UBERON:0006601!4.46e-15!173;UBERON:0000153!1.30e-13!129;UBERON:0007811!1.30e-13!129;UBERON:0000033!1.42e-13!123;UBERON:0005743!3.20e-13!86;UBERON:0001017!1.04e-12!82;UBERON:0000955!1.26e-12!69;UBERON:0006238!1.26e-12!69;UBERON:0001869!1.99e-12!32;UBERON:0000464!2.11e-12!104;UBERON:0000073!1.11e-11!94;UBERON:0001016!1.11e-11!94;UBERON:0002616!1.28e-11!59;UBERON:0002780!1.44e-11!41;UBERON:0001890!1.44e-11!41;UBERON:0006240!1.44e-11!41;UBERON:0001893!1.64e-11!34;UBERON:0001049!2.04e-11!57;UBERON:0005068!2.04e-11!57;UBERON:0006241!2.04e-11!57;UBERON:0007135!2.04e-11!57;UBERON:0002020!2.11e-11!34;UBERON:0003528!2.11e-11!34;UBERON:0003056!2.62e-11!61;UBERON:0003075!4.83e-11!86;UBERON:0007284!4.83e-11!86;UBERON:0002791!5.83e-11!33;UBERON:0003080!6.06e-11!42;UBERON:0002619!8.04e-11!22;UBERON:0000956!1.96e-10!25;UBERON:0000203!1.96e-10!25;UBERON:0002346!3.03e-10!90;UBERON:0000475!3.58e-10!365;UBERON:0001950!4.26e-10!20;UBERON:0007023!7.30e-09!115;UBERON:0000062!8.99e-09!511;UBERON:0000064!9.09e-09!219;UBERON:0000466!1.84e-08!126;UBERON:0005153!3.19e-08!37;UBERON:0005178!1.01e-07!34;UBERON:0002224!1.01e-07!34;UBERON:0005181!3.34e-07!35;UBERON:0005157!5.37e-07!51;UBERON:0000481!7.00e-07!347;UBERON:0004119!8.79e-07!169;UBERON:0000925!8.79e-07!169;UBERON:0006595!8.79e-07!169;UBERON:0002048!9.67e-07!22;UBERON:0000117!9.67e-07!22;UBERON:0000171!9.67e-07!22;UBERON:0000170!9.67e-07!22;UBERON:0005597!9.67e-07!22;UBERON:0000118!9.67e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.47e-17;22!UBERON:0001950;1.10e-15;20!UBERON:0000956;4.93e-14;25!UBERON:0000203;4.93e-14;25!UBERON:0001869;1.13e-12;32!UBERON:0003528;1.19e-11;34!UBERON:0002020;1.19e-11;34!UBERON:0001893;1.50e-11;34!UBERON:0002791;1.78e-11;32!UBERON:0005178;1.14e-07;34!UBERON:0002224;1.14e-07;34!UBERON:0000200;1.63e-07;6!UBERON:0002780;2.61e-07;41!UBERON:0001890;2.61e-07;41!UBERON:0005181;8.14e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.39e-17,22;UBERON:0001950,6.04e-16,20;UBERON:0001869,9.03e-15,32;UBERON:0000956,2.80e-14,25;UBERON:0000203,2.80e-14,25;UBERON:0001893,1.88e-13,34;UBERON:0002791,2.88e-13,32;UBERON:0003528,4.16e-13,34;UBERON:0002020,4.16e-13,34;UBERON:0002780,7.42e-11,41;UBERON:0001890,7.42e-11,41;UBERON:0003080,7.42e-11,41;UBERON:0006240,7.42e-11,41;UBERON:0000073,7.51e-09,53;UBERON:0002616,7.51e-09,53;UBERON:0005178,9.23e-09,34;UBERON:0002224,9.23e-09,34;UBERON:0004121,1.04e-08,171;UBERON:0000924,1.04e-08,171;UBERON:0006601,1.04e-08,171;UBERON:0005181,2.45e-08,35;UBERON:0003056,3.54e-08,61;UBERON:0000955,3.73e-08,68;UBERON:0006238,3.73e-08,68;UBERON:0001049,5.83e-08,56;UBERON:0005068,5.83e-08,56;UBERON:0006241,5.83e-08,56;UBERON:0007135,5.83e-08,56;UBERON:0001017,5.93e-08,81;UBERON:0011216,6.36e-08,223;UBERON:0000200,1.72e-07,6;UBERON:0005153,1.74e-07,37;UBERON:0010371,3.74e-07,104;UBERON:0000915,3.76e-07,52 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,1.47440361900905,0.697801167972428,1.09220686065086,1.31883489114227,0.247532705920093,0,0,0,0,0.487932798790507,0.61560529038394,0,0.626909442956176,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,1.83884244895785,2.71085326900425,2.9580320813343,0,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0.821127996921047,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0.144846518960824,0,0,0.661743720148475,1.55210578223795,0.614843499851882,0.654895377488563,5.10013403609559,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0,0,0,4.79703457356788,0,0,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0.545492241181669,0.860413786167011,3.29329006549908,2.65059536642971,2.78865462886844,1.55491582523056,2.52320850875628,1.09493207722749,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.857839051492628,2.52425656439839,2.24803506515239,1.3068766413512,2.31471112896324,0,0,0,0.34779121492523,0.587043471179108,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0,0.283550194484773,0.895585227028483,1.45316969256981,0.766765358330422,0.492663237895943,3.69803422855549,4.56121854189699,7.35011762426503,8.71072790642022,0.253991577168676,0,0,0,0,0.300343057843917,0,0.224262168690721,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.301439377059586,1.74306691720059,1.49959486773086,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0.254094624222463,1.30139853857622,0,0.502548796003046,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0.737476674166813,0.260650843404249,0.195801157462741,0,0.206768026122887,0,0,0,3.32870879020994,2.11673205330776,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,1.80455823272956,1.93370076765382,0,0.182091168006717,0.393373244878272,0.902399225814824,0.308061348417659,1.56869953835371,1.46139224653261,1.16106791782163,0,0,0.215915916102139,0,2.43851793789468,2.00675909541941,0.764628819135115,0,2.23874754722178,0,0,0.256450125116389,0.984043937099117,0.650756789328606,0.9273691048295,0.0915694648183434,0.247528499761764,2.29706215198469,2.60024098414608,0,0,0,0,0,0,0,0.170453254832202,0.178064071293475,0.661139661443912,1.72971060628596,2.04180339991335,1.8208400553999,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0.842516912477962,0.975267478179181,0,0,0,0.141405431953713,0,1.10273068709225,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0,1.73199802905922,1.34060455107157,5.44454924306613,0.659006605437454,2.15252686335615,1.68471475667626,5.32116184244011,1.1486170010348,0,0,0,0.238231775457789,0,0,0,0,1.70918513803957,0.962479855263359,7.35120647943095,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,16.0013618632026,0.270455678475983,0.33307196799782,1.4098700508785,3.7428108081644,0,0.36408156524854,0,0.284136146806413,1.43246690842614,0.890894042497916,4.60741053148848,3.97659059106519,1.96937182974718,0.222617410045812,0,0.211125408127993,0.796991953004279,0,0.503865495708552,1.94310496754094,0.123084805461069,0,1.16828856491525,1.9692329214317,0,0.591860433821602,0,0,0.969332746095218,1.85536196323703,3.99227596002388,3.38556089410803,4.28553999981359,0,4.09656413827799,5.84783395673362,3.30942754475111,2.06846023944879,1.16641845353302,0.173624994933292,0.885741385813839,1.92954301800653,1.52581736317083,0.552896299656123,0.591095237907095,0.438770794307945,0,0.697118721393016,0.769502585037971,0,0.69169171316418,2.2439411102443,0.869178975376065,2.55200927785536,0.457987967009312,1.06606955203727,0,0,0.831058409500782,2.03036094555463,1.76456280885966,2.3495022176618,1.3282761290693,0.158936578980379,2.3209787098083,2.77495773870551,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.202203398942031,0,0.468528891450678,0,10.1745601844687,0.242780379534093,1.57833761139756,0,1.83643656978294,0.126373159256976,0.150323419414493,0.414752765588989,1.32930774541437,0.330991955875499,0,1.19472429772959,2.27687636823834,0.138674673013139,2.95051555169723,1.66587075604442,1.91530254476886,0.52418000472609,0.171986032471617,0,0,0,2.5217144286989,0.970817393606503,0,0,0.19871461170299,2.089256266544,3.12882212375685,2.48492342779755,0.640358984218058,1.79828648623917,1.29681375438695,0.80175617316141,0.514784993585894,0.14405479798815,1.36677789121976,4.00679858848552,0,0,0,0.5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| ||
|short_description=p4@KIAA1522 | |||
}} | }} |
Latest revision as of 15:48, 17 September 2015
Short description: | p4@KIAA1522 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KIAA1522_5end |
Coexpression cluster: | C3971_Mast_breast_lung_Wilms_salivary_mesothelioma_oral |
Association with transcript: | -33bp_to_ENST00000468130_5end |
EntrezGene: | KIAA1522 |
HGNC: | 29301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.07e-19 | 253 |
endo-epithelial cell | 1.49e-13 | 42 |
endodermal cell | 3.03e-09 | 58 |
respiratory epithelial cell | 2.66e-08 | 13 |
squamous epithelial cell | 8.52e-08 | 63 |
epithelial cell of tracheobronchial tree | 3.99e-07 | 9 |
epithelial cell of lower respiratory tract | 3.99e-07 | 9 |
endocrine cell | 5.42e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.39e-17 | 22 |
neocortex | 6.04e-16 | 20 |
cerebral hemisphere | 9.03e-15 | 32 |
cerebral cortex | 2.80e-14 | 25 |
pallium | 2.80e-14 | 25 |
telencephalon | 1.88e-13 | 34 |
regional part of telencephalon | 2.88e-13 | 32 |
brain grey matter | 4.16e-13 | 34 |
gray matter | 4.16e-13 | 34 |
regional part of forebrain | 7.42e-11 | 41 |
forebrain | 7.42e-11 | 41 |
anterior neural tube | 7.42e-11 | 41 |
future forebrain | 7.42e-11 | 41 |
regional part of nervous system | 7.51e-09 | 53 |
regional part of brain | 7.51e-09 | 53 |
thoracic cavity element | 9.23e-09 | 34 |
thoracic cavity | 9.23e-09 | 34 |
ectoderm-derived structure | 1.04e-08 | 171 |
ectoderm | 1.04e-08 | 171 |
presumptive ectoderm | 1.04e-08 | 171 |
thoracic segment organ | 2.45e-08 | 35 |
pre-chordal neural plate | 3.54e-08 | 61 |
brain | 3.73e-08 | 68 |
future brain | 3.73e-08 | 68 |
neural tube | 5.83e-08 | 56 |
neural rod | 5.83e-08 | 56 |
future spinal cord | 5.83e-08 | 56 |
neural keel | 5.83e-08 | 56 |
central nervous system | 5.93e-08 | 81 |
organ system subdivision | 6.36e-08 | 223 |
gyrus | 1.72e-07 | 6 |
epithelial bud | 1.74e-07 | 37 |
ecto-epithelium | 3.74e-07 | 104 |
thoracic segment of trunk | 3.76e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.29e-14 | 106 |
cell type cancer | 9.30e-12 | 143 |
squamous cell carcinoma | 1.29e-09 | 14 |
adenocarcinoma | 1.16e-08 | 25 |