FFCP PHASE1:Hg19::chr19:37019136..37019178,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339324 | |EntrezGene=339324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13499 | |HGNC=13499 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000520608,uc002oee.1,uc002oef.1_5end | |association_with_transcript=0bp_to_ENST00000520608,uc002oee.1,uc002oef.1_5end | ||
|cluster_id=chr19:37019136..37019178,- | |||
|description=CAGE_peak_1_at_ZNF260_5end | |description=CAGE_peak_1_at_ZNF260_5end | ||
|id=chr19:37019136..37019178,- | |id=chr19:37019136..37019178,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0002780;8.66e-09;41!UBERON:0001890;8.66e-09;41!UBERON:0002791;5.51e-08;32!UBERON:0000073;6.54e-08;53!UBERON:0002616;6.54e-08;53!UBERON:0003528;7.30e-08;34!UBERON:0002020;7.30e-08;34!UBERON:0001869;1.70e-07;32!UBERON:0001893;2.91e-07;34 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!2.28e-10!143;DOID:162!1.42e-09!235;DOID:14566!7.60e-09!239;DOID:305!3.00e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.28e-10,143;DOID:162,1.32e-09,235;DOID:14566,7.06e-09,239;DOID:305,3.00e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.14e-16!82;UBERON:0005743!1.35e-15!86;UBERON:0000073!2.96e-15!94;UBERON:0001016!2.96e-15!94;UBERON:0001049!1.75e-13!57;UBERON:0005068!1.75e-13!57;UBERON:0006241!1.75e-13!57;UBERON:0007135!1.75e-13!57;UBERON:0004121!2.88e-12!169;UBERON:0000924!3.20e-12!173;UBERON:0006601!3.20e-12!173;UBERON:0000955!6.19e-12!69;UBERON:0006238!6.19e-12!69;UBERON:0002780!9.80e-12!41;UBERON:0001890!9.80e-12!41;UBERON:0006240!9.80e-12!41;UBERON:0002616!1.34e-11!59;UBERON:0003080!1.36e-11!42;UBERON:0003075!4.11e-11!86;UBERON:0007284!4.11e-11!86;UBERON:0002346!6.52e-11!90;UBERON:0007023!2.41e-10!115;UBERON:0000153!3.11e-10!129;UBERON:0007811!3.11e-10!129;UBERON:0000033!1.03e-09!123;UBERON:0002020!3.12e-09!34;UBERON:0003528!3.12e-09!34;UBERON:0003056!3.62e-09!61;UBERON:0002791!1.19e-08!33;UBERON:0001893!1.49e-08!34;UBERON:0001869!4.52e-08!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.66e-09;41!UBERON:0001890;8.66e-09;41!UBERON:0002791;5.51e-08;32!UBERON:0000073;6.54e-08;53!UBERON:0002616;6.54e-08;53!UBERON:0003528;7.30e-08;34!UBERON:0002020;7.30e-08;34!UBERON:0001869;1.70e-07;32!UBERON:0001893;2.91e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.87e-16,81;UBERON:0001016,1.52e-15,89;UBERON:0001049,1.33e-13,56;UBERON:0005068,1.33e-13,56;UBERON:0006241,1.33e-13,56;UBERON:0007135,1.33e-13,56;UBERON:0011216,1.38e-12,223;UBERON:0000073,1.50e-12,53;UBERON:0002616,1.50e-12,53;UBERON:0000955,5.25e-12,68;UBERON:0006238,5.25e-12,68;UBERON:0002780,9.77e-12,41;UBERON:0001890,9.77e-12,41;UBERON:0003080,9.77e-12,41;UBERON:0006240,9.77e-12,41;UBERON:0004121,1.28e-11,171;UBERON:0000924,1.28e-11,171;UBERON:0006601,1.28e-11,171;UBERON:0003075,1.50e-10,82;UBERON:0007284,1.50e-10,82;UBERON:0002346,2.38e-10,86;UBERON:0010371,3.22e-10,104;UBERON:0007023,5.49e-10,114;UBERON:0003528,3.12e-09,34;UBERON:0002020,3.12e-09,34;UBERON:0003056,6.86e-09,61;UBERON:0002791,1.14e-08,32;UBERON:0001893,1.49e-08,34;UBERON:0001869,4.51e-08,32;UBERON:0010314,5.09e-07,132 | |||
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| ||
|short_description=p1@ZNF260 | |short_description=p1@ZNF260 | ||
}} | }} |
Latest revision as of 16:48, 17 September 2015
Short description: | p1@ZNF260 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF260_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000520608, uc002oee.1, uc002oef.1_5end |
EntrezGene: | ZNF260 |
HGNC: | 13499 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.87e-16 | 81 |
nervous system | 1.52e-15 | 89 |
neural tube | 1.33e-13 | 56 |
neural rod | 1.33e-13 | 56 |
future spinal cord | 1.33e-13 | 56 |
neural keel | 1.33e-13 | 56 |
organ system subdivision | 1.38e-12 | 223 |
regional part of nervous system | 1.50e-12 | 53 |
regional part of brain | 1.50e-12 | 53 |
brain | 5.25e-12 | 68 |
future brain | 5.25e-12 | 68 |
regional part of forebrain | 9.77e-12 | 41 |
forebrain | 9.77e-12 | 41 |
anterior neural tube | 9.77e-12 | 41 |
future forebrain | 9.77e-12 | 41 |
ectoderm-derived structure | 1.28e-11 | 171 |
ectoderm | 1.28e-11 | 171 |
presumptive ectoderm | 1.28e-11 | 171 |
neural plate | 1.50e-10 | 82 |
presumptive neural plate | 1.50e-10 | 82 |
neurectoderm | 2.38e-10 | 86 |
ecto-epithelium | 3.22e-10 | 104 |
adult organism | 5.49e-10 | 114 |
brain grey matter | 3.12e-09 | 34 |
gray matter | 3.12e-09 | 34 |
pre-chordal neural plate | 6.86e-09 | 61 |
regional part of telencephalon | 1.14e-08 | 32 |
telencephalon | 1.49e-08 | 34 |
cerebral hemisphere | 4.51e-08 | 32 |
structure with developmental contribution from neural crest | 5.09e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.28e-10 | 143 |
cancer | 1.32e-09 | 235 |
disease of cellular proliferation | 7.06e-09 | 239 |
carcinoma | 3.00e-08 | 106 |