FFCP PHASE1:Hg19::chr15:43477664..43477684,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:43477664..43477684,+ to FFCP PHASE1:Hg19::chr15:43477664..43477684,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23582 | |EntrezGene=23582 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1587 | |HGNC=1587 | ||
|TSSclassifier=strong | |||
|UniProt=B4DHB5 | |UniProt=B4DHB5 | ||
|association_with_transcript=27bp_to_ENST00000356633_5end | |||
|cluster_id=chr15:43477664..43477684,+ | |||
|description=CAGE_peak_2_at_CCNDBP1_5end | |||
|id=chr15:43477664..43477684,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.29e-13!172;CL:0000566!2.29e-13!172;CL:0002032!1.28e-12!165;CL:0000837!1.28e-12!165;CL:0000988!2.67e-12!182;CL:0000738!1.41e-09!140;CL:0000542!1.06e-08!53;CL:0000051!1.06e-08!53;CL:0000838!1.29e-08!52;CL:0000084!2.60e-08!25;CL:0000827!2.60e-08!25;CL:0000791!2.76e-08!18;CL:0000789!2.76e-08!18;CL:0002420!2.76e-08!18;CL:0002419!2.76e-08!18;CL:0000790!2.76e-08!18;CL:0002087!3.17e-08!119;CL:0002031!7.14e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.85e-09;25!CL:0000791;1.35e-08;18!CL:0000789;1.35e-08;18!CL:0002419;1.35e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.02e-12,168;CL:0000988,2.26e-12,177;CL:0002032,4.24e-12,161;CL:0000837,4.24e-12,161;CL:0000084,1.54e-09,25;CL:0000827,1.54e-09,25;CL:0000791,3.87e-09,18;CL:0000789,3.87e-09,18;CL:0002420,3.87e-09,18;CL:0002419,3.87e-09,18;CL:0000790,3.87e-09,18;CL:0000738,1.75e-08,136;CL:0000542,1.77e-08,53;CL:0000051,1.77e-08,53;CL:0000838,2.21e-08,52;CL:0002087,3.18e-07,115;CL:0002031,6.72e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.35e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-20!115;UBERON:0001049!1.09e-12!57;UBERON:0005068!1.09e-12!57;UBERON:0006241!1.09e-12!57;UBERON:0007135!1.09e-12!57;UBERON:0003080!1.19e-10!42;UBERON:0002020!2.51e-10!34;UBERON:0003528!2.51e-10!34;UBERON:0002780!3.93e-10!41;UBERON:0001890!3.93e-10!41;UBERON:0006240!3.93e-10!41;UBERON:0002619!7.48e-10!22;UBERON:0001893!8.07e-10!34;UBERON:0001869!9.29e-10!32;UBERON:0002616!2.33e-09!59;UBERON:0002791!2.49e-09!33;UBERON:0001950!2.59e-09!20;UBERON:0000956!3.20e-08!25;UBERON:0000203!3.20e-08!25;UBERON:0000955!5.54e-08!69;UBERON:0006238!5.54e-08!69;UBERON:0000178!8.98e-08!15;UBERON:0000179!8.98e-08!15;UBERON:0000463!8.98e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.65e-10;22!UBERON:0001950;4.14e-10;20!UBERON:0003528;5.94e-09;34!UBERON:0002020;5.94e-09;34!UBERON:0001869;7.48e-09;32!UBERON:0000956;9.22e-09;25!UBERON:0000203;9.22e-09;25!UBERON:0001893;1.37e-08;34!UBERON:0002791;2.49e-08;32!UBERON:0000178;2.61e-08;15!UBERON:0000179;2.61e-08;15!UBERON:0000463;2.61e-08;15!UBERON:0002780;2.98e-07;41!UBERON:0001890;2.98e-07;41!UBERON:0000073;4.64e-07;53!UBERON:0002616;4.64e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.00e-19,114;UBERON:0001049,1.22e-12,56;UBERON:0005068,1.22e-12,56;UBERON:0006241,1.22e-12,56;UBERON:0007135,1.22e-12,56;UBERON:0000073,2.20e-12,53;UBERON:0002616,2.20e-12,53;UBERON:0003528,5.89e-11,34;UBERON:0002020,5.89e-11,34;UBERON:0002619,6.65e-11,22;UBERON:0002780,1.03e-10,41;UBERON:0001890,1.03e-10,41;UBERON:0003080,1.03e-10,41;UBERON:0006240,1.03e-10,41;UBERON:0001893,2.13e-10,34;UBERON:0001869,2.56e-10,32;UBERON:0001950,2.70e-10,20;UBERON:0002791,8.57e-10,32;UBERON:0000956,6.10e-09,25;UBERON:0000203,6.10e-09,25;UBERON:0000178,1.46e-08,15;UBERON:0000179,1.46e-08,15;UBERON:0000463,1.46e-08,15;UBERON:0000955,1.97e-08,68;UBERON:0006238,1.97e-08,68;UBERON:0001017,5.99e-07,81 | |||
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| ||
|short_description=p2@CCNDBP1 | |||
}} | }} |
Latest revision as of 16:56, 17 September 2015
Short description: | p2@CCNDBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCNDBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000356633_5end |
EntrezGene: | CCNDBP1 |
HGNC: | 1587 |
UniProt: | B4DHB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.02e-12 | 168 |
hematopoietic cell | 2.26e-12 | 177 |
hematopoietic oligopotent progenitor cell | 4.24e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.24e-12 | 161 |
T cell | 1.54e-09 | 25 |
pro-T cell | 1.54e-09 | 25 |
mature alpha-beta T cell | 3.87e-09 | 18 |
alpha-beta T cell | 3.87e-09 | 18 |
immature T cell | 3.87e-09 | 18 |
mature T cell | 3.87e-09 | 18 |
immature alpha-beta T cell | 3.87e-09 | 18 |
leukocyte | 1.75e-08 | 136 |
lymphocyte | 1.77e-08 | 53 |
common lymphoid progenitor | 1.77e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.21e-08 | 52 |
nongranular leukocyte | 3.18e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 6.72e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.00e-19 | 114 |
neural tube | 1.22e-12 | 56 |
neural rod | 1.22e-12 | 56 |
future spinal cord | 1.22e-12 | 56 |
neural keel | 1.22e-12 | 56 |
regional part of nervous system | 2.20e-12 | 53 |
regional part of brain | 2.20e-12 | 53 |
brain grey matter | 5.89e-11 | 34 |
gray matter | 5.89e-11 | 34 |
regional part of cerebral cortex | 6.65e-11 | 22 |
regional part of forebrain | 1.03e-10 | 41 |
forebrain | 1.03e-10 | 41 |
anterior neural tube | 1.03e-10 | 41 |
future forebrain | 1.03e-10 | 41 |
telencephalon | 2.13e-10 | 34 |
cerebral hemisphere | 2.56e-10 | 32 |
neocortex | 2.70e-10 | 20 |
regional part of telencephalon | 8.57e-10 | 32 |
cerebral cortex | 6.10e-09 | 25 |
pallium | 6.10e-09 | 25 |
blood | 1.46e-08 | 15 |
haemolymphatic fluid | 1.46e-08 | 15 |
organism substance | 1.46e-08 | 15 |
brain | 1.97e-08 | 68 |
future brain | 1.97e-08 | 68 |
central nervous system | 5.99e-07 | 81 |