FFCP PHASE1:Hg19::chr6:30615167..30615213,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:30615167..30615213,+
|short_description=p3@C6orf136
|description=CAGE_peak_3_at_C6orf136_5end
|association_with_transcript=0bp_to_ENST00000446773_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221545 | |EntrezGene=221545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21301 | |HGNC=21301 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000446773_5end | |||
|cluster_id=chr6:30615167..30615213,+ | |||
|description=CAGE_peak_3_at_C6orf136_5end | |||
|id=chr6:30615167..30615213,+ | |||
|ontology_enrichment_celltype=CL:0000542!7.38e-09!53;CL:0000051!7.38e-09!53;CL:0000838!1.14e-08!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.60e-09,53;CL:0000051,6.60e-09,53;CL:0000838,1.02e-08,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.26e-09;82 | |||
|ontology_enrichment_disease=DOID:162!8.58e-20!235;DOID:14566!2.74e-18!239;DOID:0050687!8.28e-17!143;DOID:305!3.60e-14!106;DOID:3095!7.14e-08!22;DOID:2994!7.14e-08!22;DOID:0050686!7.94e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.02e-07;22!DOID:2994;1.02e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.33e-19,235;DOID:14566,3.63e-18,239;DOID:0050687,1.13e-16,143;DOID:305,3.32e-14,106;DOID:3095,8.16e-08,22;DOID:2994,8.16e-08,22;DOID:0050686,1.05e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-18!115;UBERON:0000073!7.79e-17!94;UBERON:0001016!7.79e-17!94;UBERON:0005743!1.27e-16!86;UBERON:0001017!9.37e-16!82;UBERON:0000955!8.42e-15!69;UBERON:0006238!8.42e-15!69;UBERON:0001049!8.98e-15!57;UBERON:0005068!8.98e-15!57;UBERON:0006241!8.98e-15!57;UBERON:0007135!8.98e-15!57;UBERON:0002780!1.66e-13!41;UBERON:0001890!1.66e-13!41;UBERON:0006240!1.66e-13!41;UBERON:0002346!2.67e-13!90;UBERON:0003080!1.91e-12!42;UBERON:0001869!4.38e-12!32;UBERON:0001893!4.60e-12!34;UBERON:0002616!7.02e-12!59;UBERON:0002020!7.25e-12!34;UBERON:0003528!7.25e-12!34;UBERON:0003075!9.19e-12!86;UBERON:0007284!9.19e-12!86;UBERON:0002791!1.52e-11!33;UBERON:0002619!4.29e-11!22;UBERON:0000153!1.59e-10!129;UBERON:0007811!1.59e-10!129;UBERON:0003056!2.01e-10!61;UBERON:0001950!2.02e-10!20;UBERON:0000924!3.11e-10!173;UBERON:0006601!3.11e-10!173;UBERON:0000956!1.06e-09!25;UBERON:0000203!1.06e-09!25;UBERON:0000033!1.42e-09!123;UBERON:0004121!4.34e-09!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.13e-11;32!UBERON:0002619;3.87e-11;22!UBERON:0001893;6.83e-11;34!UBERON:0003528;8.81e-11;34!UBERON:0002020;8.81e-11;34!UBERON:0002791;1.21e-10;32!UBERON:0001950;1.68e-10;20!UBERON:0000956;6.60e-10;25!UBERON:0000203;6.60e-10;25!UBERON:0002780;7.14e-10;41!UBERON:0001890;7.14e-10;41!UBERON:0000073;2.26e-09;53!UBERON:0002616;2.26e-09;53!UBERON:0000955;1.94e-08;68!UBERON:0000922;7.63e-08;49!UBERON:0001017;1.79e-07;75!UBERON:0001016;6.36e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.15e-18,114;UBERON:0001016,8.83e-17,89;UBERON:0001017,1.22e-16,81;UBERON:0000073,6.33e-16,53;UBERON:0002616,6.33e-16,53;UBERON:0001049,7.45e-16,56;UBERON:0005068,7.45e-16,56;UBERON:0006241,7.45e-16,56;UBERON:0007135,7.45e-16,56;UBERON:0000955,9.94e-16,68;UBERON:0006238,9.94e-16,68;UBERON:0011216,1.03e-14,223;UBERON:0002346,8.98e-14,86;UBERON:0002780,1.38e-13,41;UBERON:0001890,1.38e-13,41;UBERON:0003080,1.38e-13,41;UBERON:0006240,1.38e-13,41;UBERON:0003075,3.44e-12,82;UBERON:0007284,3.44e-12,82;UBERON:0001869,3.73e-12,32;UBERON:0001893,3.91e-12,34;UBERON:0003528,6.20e-12,34;UBERON:0002020,6.20e-12,34;UBERON:0002791,1.78e-11,32;UBERON:0002619,3.71e-11,22;UBERON:0003056,4.56e-11,61;UBERON:0001950,1.76e-10,20;UBERON:0004121,5.97e-10,171;UBERON:0000924,5.97e-10,171;UBERON:0006601,5.97e-10,171;UBERON:0000956,9.36e-10,25;UBERON:0000203,9.36e-10,25;UBERON:0010371,7.35e-09,104 | |||
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| ||
|short_description=p3@C6orf136 | |||
}} | }} |
Latest revision as of 17:26, 17 September 2015
Short description: | p3@C6orf136 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C6orf136_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000446773_5end |
EntrezGene: | C6orf136 |
HGNC: | 21301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.60e-09 | 53 |
common lymphoid progenitor | 6.60e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.02e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.15e-18 | 114 |
nervous system | 8.83e-17 | 89 |
central nervous system | 1.22e-16 | 81 |
regional part of nervous system | 6.33e-16 | 53 |
regional part of brain | 6.33e-16 | 53 |
neural tube | 7.45e-16 | 56 |
neural rod | 7.45e-16 | 56 |
future spinal cord | 7.45e-16 | 56 |
neural keel | 7.45e-16 | 56 |
brain | 9.94e-16 | 68 |
future brain | 9.94e-16 | 68 |
organ system subdivision | 1.03e-14 | 223 |
neurectoderm | 8.98e-14 | 86 |
regional part of forebrain | 1.38e-13 | 41 |
forebrain | 1.38e-13 | 41 |
anterior neural tube | 1.38e-13 | 41 |
future forebrain | 1.38e-13 | 41 |
neural plate | 3.44e-12 | 82 |
presumptive neural plate | 3.44e-12 | 82 |
cerebral hemisphere | 3.73e-12 | 32 |
telencephalon | 3.91e-12 | 34 |
brain grey matter | 6.20e-12 | 34 |
gray matter | 6.20e-12 | 34 |
regional part of telencephalon | 1.78e-11 | 32 |
regional part of cerebral cortex | 3.71e-11 | 22 |
pre-chordal neural plate | 4.56e-11 | 61 |
neocortex | 1.76e-10 | 20 |
ectoderm-derived structure | 5.97e-10 | 171 |
ectoderm | 5.97e-10 | 171 |
presumptive ectoderm | 5.97e-10 | 171 |
cerebral cortex | 9.36e-10 | 25 |
pallium | 9.36e-10 | 25 |
ecto-epithelium | 7.35e-09 | 104 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.33e-19 | 235 |
disease of cellular proliferation | 3.63e-18 | 239 |
cell type cancer | 1.13e-16 | 143 |
carcinoma | 3.32e-14 | 106 |
germ cell and embryonal cancer | 8.16e-08 | 22 |
germ cell cancer | 8.16e-08 | 22 |
organ system cancer | 1.05e-07 | 137 |