FFCP PHASE1:Hg19::chr15:45021501..45021513,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:45021501..45021513,+ to FFCP PHASE1:Hg19::chr15:45021501..45021513,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140691 | |EntrezGene=140691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17857 | |HGNC=17857 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=161bp_to_ENST00000561237_5end | |||
|cluster_id=chr15:45021501..45021513,+ | |||
|description=CAGE_peak_5_at_TRIM69_5end | |||
|id=chr15:45021501..45021513,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.50e-13;33!CL:0002057;1.50e-13;33!CL:0000473;2.46e-13;39!CL:0000234;2.46e-13;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.04e-13,48;CL:0000234,1.04e-13,48;CL:0000839,8.62e-12,66;CL:0000557,1.59e-11,67;CL:0000766,1.60e-11,72;CL:0000860,2.85e-11,42;CL:0002057,2.85e-11,42;CL:0002194,4.18e-11,59;CL:0000576,4.18e-11,59;CL:0000040,4.18e-11,59;CL:0000559,4.18e-11,59;CL:0002009,1.45e-10,61;CL:0002031,2.77e-08,120;CL:0000738,8.07e-08,136;CL:0002087,2.52e-07,115;CL:0000763,5.34e-07,108;CL:0000049,5.34e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.33e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.66e-16!115;UBERON:0001049!1.43e-11!57;UBERON:0005068!1.43e-11!57;UBERON:0006241!1.43e-11!57;UBERON:0007135!1.43e-11!57;UBERON:0002780!6.85e-11!41;UBERON:0001890!6.85e-11!41;UBERON:0006240!6.85e-11!41;UBERON:0003080!3.20e-10!42;UBERON:0002616!7.75e-09!59;UBERON:0001017!9.22e-09!82;UBERON:0005743!1.22e-08!86;UBERON:0001893!1.29e-08!34;UBERON:0002020!2.20e-08!34;UBERON:0003528!2.20e-08!34;UBERON:0001869!2.84e-08!32;UBERON:0003075!3.78e-08!86;UBERON:0007284!3.78e-08!86;UBERON:0000073!4.15e-08!94;UBERON:0001016!4.15e-08!94;UBERON:0002791!4.16e-08!33;UBERON:0002346!1.18e-07!90;UBERON:0000955!1.39e-07!69;UBERON:0006238!1.39e-07!69;UBERON:0004765!5.94e-07!101;UBERON:0001434!5.94e-07!101;UBERON:0002371!7.42e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.02e-13,76;UBERON:0001474,1.98e-11,82;UBERON:0002390,2.71e-11,98;UBERON:0003061,2.71e-11,98;UBERON:0002193,2.43e-10,108;UBERON:0002405,4.14e-10,93;UBERON:0004765,8.23e-10,90;UBERON:0001434,6.14e-09,100;UBERON:0007023,1.08e-08,114;UBERON:0003081,6.44e-08,203;UBERON:0002780,9.77e-08,41;UBERON:0001890,9.77e-08,41;UBERON:0003080,9.77e-08,41;UBERON:0006240,9.77e-08,41;UBERON:0001049,1.62e-07,56;UBERON:0005068,1.62e-07,56;UBERON:0006241,1.62e-07,56;UBERON:0007135,1.62e-07,56;UBERON:0000073,3.93e-07,53;UBERON:0002616,3.93e-07,53;UBERON:0002204,8.95e-07,167 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,1.04474251279935,0,0,0,0,0.618831764800233,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,1.14494394852423,0.821246550437305,0.251085279189606,0.534893840235659,0.0821005894499457,1.18066171970519,0.786728553697808,0,0.309632246632152,0,0,0.739508020333575,1.47187681102573,0.142169232487422,1.76160263600908,0,0,0,0.895661896959697,0,0,0.872389432677388,0,0.242584061187816,1.16214518452842,0,1.54853185447552,3.16461631554365,0.512321413058201,1.89185783910868,1.37898272294647,0,0,0.941211697713023,0.272906150057846,0.898893937780338,1.83650335422542,1.92557416245656,0.639337125799041,1.31940520074686,1.59570926097305,0,3.77272010217159,1.13477044938228,0,2.00998932205395,1.0429658368404,3.04064382587163,3.02699751316684,4.78760926783834,2.53169909952708,0.211255286311942,0.425208599930087,0,0.44931452458598,0.300353785683013,0,0,0.39783335439818,0.365328307529268,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0.574752439954483,1.32208974556972,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,1.00311897234407,0,0,0,0.445641827540694,1.17842362989935,0.443067789167242,0.812411591295047,1.5370958367081,1.30059347559878,0.493313713811028,0.829050053357545,0.869409257205157,0,0,0,0.453237370790265,0.766440987203842,0,0.253019692019503,0,0,0,0.451725357233318,1.15187950038977,1.24930726552346,0.710331756132051,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0.378139268656271,0.665188192387692,0.175669571386252,0.589405839739707,0,0,1.62273696827342,0.696518949197069,0.930705723632056,0.238490624305342,0,0,0.39752481473341,0,0,1.13061588384802,0,0,0.835979866147242,0,0.35576626268671,0.33472061276467,0,2.28081631715554,0.488124115096339,0.367663080345869,0,0.625098097988558,0,0.337834441449967,3.06633274931766,0,0,0,0,0,0,0.506522046658319,0,0,0.709336764396714,1.12135520028461,0,0,0.622422070799533,0.269421344139376,0.163461903113459,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0.469737994575059,0,0.140450806702248,0,0.368502951935304,0.413303124703062,1.18800285728205,0.741800787835671,0,0,0.673344455816265,0,0.554128230968366,0.438977620880838,0.612975591598039,0,0.340296549480063,0.358779271377724,0.427114777637135,0,0,0.206105058476878,0.257640540045629,0.37223371266318,0.168776332241266,0.487185025805993,0.252433774244115,0.552299391853796,0.484938170456436,0,0.201504196455281,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.603173834469785,0.0925884451585296,0,0,0,0.231860809950154,0,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0.492434012174795,3.27605971194933,2.22946743433092,0,0.335964256397719,0.425325291727159,0.268675568108545,0.290633938513962,0,2.46331618947972,1.84901711427775,0.207328115540772,0.576479813667846,0.75745460055828,0.190493682876507,0.381988425558278,0,0,0.514137463516618,0,0,0.112131084345361,0,0.36669142910475,0,0,0,0.531876233169741,0,0,0,0.532844358032199,0.285955987316295,0.542621605391443,0,0,0.710783897485092,0,0.904318131178758,0.871533458600294,0.199945982364114,0,1.50677127429638,0,0.718874566474748,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0.394061520403854,0,0.256686072559497,1.77866236955724,1.30139853857622,0,0.837581326671744,1.27587750330633,2.99602809578873,0,0.828831026872071,0.24538298343828,0.500170521059677,0,0.207970861530807,0,0,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,0.868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0,0,0.256278298511402,1.02341449813341,0.160853921143607,0,0.462629081407967,0.355123450626254,0.246381468041427,1.03850885836724,0.464841513839837,0,0,0,0.34444334449382,0.364182336013434,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0.438519753291869,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0.165018999841176,0.574265537996172,0,0,0.48335359146061,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0.426133137080504,0.0890320356467374,0,0,0,0.2023155617111,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0.38126038784765,0.255897791311334,1.28381696410176,0.636406495851874,0,0,0,0.353437207037059,0.404364963146632,1.58510321173008,0,0,0.974853958525138,0,0.545999645631943,0.424216295861138,2.26016233240486,0,0.66343897524122,0.876901770507525,0,1.31178950409327,0,0.30982349809975,0.845086807596724,0.430234056612155,0.0982490410131212,0.35667105148125,0.354761064070598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|phase1_expression=0.363356758541113,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,1.04474251279935,0,0,0,0,0.618831764800233,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,1.14494394852423,0.821246550437305,0.251085279189606,0.534893840235659,0.0821005894499457,1.18066171970519,0.786728553697808,0,0.309632246632152,0,0,0.739508020333575,1.47187681102573,0.142169232487422,1.76160263600908,0,0,0,0.895661896959697,0,0,0.872389432677388,0,0.242584061187816,1.16214518452842,0,1.54853185447552,3.16461631554365,0.512321413058201,1.89185783910868,1.37898272294647,0,0,0.941211697713023,0.272906150057846,0.898893937780338,1.83650335422542,1.92557416245656,0.639337125799041,1.31940520074686,1.59570926097305,0,3.77272010217159,1.13477044938228,0,2.00998932205395,1.0429658368404,3.04064382587163,3.02699751316684,4.78760926783834,2.53169909952708,0.211255286311942,0.425208599930087,0,0.44931452458598,0.300353785683013,0,0,0.39783335439818,0.365328307529268,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0.574752439954483,1.32208974556972,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,1.00311897234407,0,0,0,0.445641827540694,1.17842362989935,0.443067789167242,0.812411591295047,1.5370958367081,1.30059347559878,0.493313713811028,0.829050053357545,0.869409257205157,0,0,0,0.453237370790265,0.766440987203842,0,0.253019692019503,0,0,0,0.451725357233318,1.15187950038977,1.24930726552346,0.710331756132051,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0.378139268656271,0.665188192387692,0.175669571386252,0.589405839739707,0,0,1.62273696827342,0.696518949197069,0.930705723632056,0.238490624305342,0,0,0.39752481473341,0,0,1.13061588384802,0,0,0.835979866147242,0,0.35576626268671,0.33472061276467,0,2.28081631715554,0.488124115096339,0.367663080345869,0,0.625098097988558,0,0.337834441449967,3.06633274931766,0,0,0,0,0,0,0.506522046658319,0,0,0.709336764396714,1.12135520028461,0,0,0.622422070799533,0.269421344139376,0.163461903113459,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0.469737994575059,0,0.140450806702248,0,0.368502951935304,0.413303124703062,1.18800285728205,0.741800787835671,0,0,0.673344455816265,0,0.554128230968366,0.438977620880838,0.612975591598039,0,0.340296549480063,0.358779271377724,0.427114777637135,0,0,0.206105058476878,0.257640540045629,0.37223371266318,0.168776332241266,0.487185025805993,0.252433774244115,0.552299391853796,0.484938170456436,0,0.201504196455281,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.603173834469785,0.0925884451585296,0,0,0,0.231860809950154,0,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0.492434012174795,3.27605971194933,2.22946743433092,0,0.335964256397719,0.425325291727159,0.268675568108545,0.290633938513962,0,2.46331618947972,1.84901711427775,0.207328115540772,0.576479813667846,0.75745460055828,0.190493682876507,0.381988425558278,0,0,0.514137463516618,0,0,0.112131084345361,0,0.36669142910475,0,0,0,0.531876233169741,0,0,0,0.532844358032199,0.285955987316295,0.542621605391443,0,0,0.710783897485092,0,0.904318131178758,0.871533458600294,0.199945982364114,0,1.50677127429638,0,0.718874566474748,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0.394061520403854,0,0.256686072559497,1.77866236955724,1.30139853857622,0,0.837581326671744,1.27587750330633,2.99602809578873,0,0.828831026872071,0.24538298343828,0.500170521059677,0,0.207970861530807,0,0,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,0.868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0,0,0.256278298511402,1.02341449813341,0.160853921143607,0,0.462629081407967,0.355123450626254,0.246381468041427,1.03850885836724,0.464841513839837,0,0,0,0.34444334449382,0.364182336013434,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0.438519753291869,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0.165018999841176,0.574265537996172,0,0,0.48335359146061,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0.426133137080504,0.0890320356467374,0,0,0,0.2023155617111,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0.38126038784765,0.255897791311334,1.28381696410176,0.636406495851874,0,0,0,0.353437207037059,0.404364963146632,1.58510321173008,0,0,0.974853958525138,0,0.545999645631943,0.424216295861138,2.26016233240486,0,0.66343897524122,0.876901770507525,0,1.31178950409327,0,0.30982349809975,0.845086807596724,0.430234056612155,0.0982490410131212,0.35667105148125,0.354761064070598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| ||
|short_description=p5@TRIM69 | |||
}} | }} |
Latest revision as of 19:28, 17 September 2015
Short description: | p5@TRIM69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRIM69_5end |
Coexpression cluster: | NA |
Association with transcript: | 161bp_to_ENST00000561237_5end |
EntrezGene: | TRIM69 |
HGNC: | 17857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.04e-13 | 48 |
phagocyte | 1.04e-13 | 48 |
myeloid lineage restricted progenitor cell | 8.62e-12 | 66 |
granulocyte monocyte progenitor cell | 1.59e-11 | 67 |
myeloid leukocyte | 1.60e-11 | 72 |
classical monocyte | 2.85e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.85e-11 | 42 |
monopoietic cell | 4.18e-11 | 59 |
monocyte | 4.18e-11 | 59 |
monoblast | 4.18e-11 | 59 |
promonocyte | 4.18e-11 | 59 |
macrophage dendritic cell progenitor | 1.45e-10 | 61 |
hematopoietic lineage restricted progenitor cell | 2.77e-08 | 120 |
leukocyte | 8.07e-08 | 136 |
nongranular leukocyte | 2.52e-07 | 115 |
myeloid cell | 5.34e-07 | 108 |
common myeloid progenitor | 5.34e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.02e-13 | 76 |
bone element | 1.98e-11 | 82 |
hematopoietic system | 2.71e-11 | 98 |
blood island | 2.71e-11 | 98 |
hemolymphoid system | 2.43e-10 | 108 |
immune system | 4.14e-10 | 93 |
skeletal element | 8.23e-10 | 90 |
skeletal system | 6.14e-09 | 100 |
adult organism | 1.08e-08 | 114 |
lateral plate mesoderm | 6.44e-08 | 203 |
regional part of forebrain | 9.77e-08 | 41 |
forebrain | 9.77e-08 | 41 |
anterior neural tube | 9.77e-08 | 41 |
future forebrain | 9.77e-08 | 41 |
neural tube | 1.62e-07 | 56 |
neural rod | 1.62e-07 | 56 |
future spinal cord | 1.62e-07 | 56 |
neural keel | 1.62e-07 | 56 |
regional part of nervous system | 3.93e-07 | 53 |
regional part of brain | 3.93e-07 | 53 |
musculoskeletal system | 8.95e-07 | 167 |