FFCP PHASE1:Hg19::chr15:45480147..45480150,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90525 | |EntrezGene=90525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25116 | |HGNC=25116 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560734_5end | |association_with_transcript=0bp_to_ENST00000560734_5end | ||
|cluster_id=chr15:45480147..45480150,- | |||
|description=CAGE_peak_3_at_SHF_5end | |description=CAGE_peak_3_at_SHF_5end | ||
|id=chr15:45480147..45480150,- | |id=chr15:45480147..45480150,- | ||
|ontology_enrichment_celltype=CL:0000133!5.12e-07!59 | |ontology_enrichment_celltype=CL:0000133!5.12e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000540;7.19e-15;6!CL:0000404;7.19e-15;6!CL:0002032;7.08e-11;1!CL:0000222;7.08e-11;1!CL:0000557;7.08e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.05e-15,6;CL:0000031,7.05e-15,6;CL:0000404,7.05e-15,6;CL:0000047,2.66e-11,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.44e-29;3!CL:0000031;7.19e-15;6!UBERON:0003099;7.08e-11;1!UBERON:0003852;7.08e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.52e-18!94;UBERON:0001016!3.52e-18!94;UBERON:0001017!8.62e-17!82;UBERON:0005743!8.97e-17!86;UBERON:0007023!7.40e-14!115;UBERON:0001049!9.93e-13!57;UBERON:0005068!9.93e-13!57;UBERON:0006241!9.93e-13!57;UBERON:0007135!9.93e-13!57;UBERON:0002346!1.77e-12!90;UBERON:0000924!1.83e-12!173;UBERON:0006601!1.83e-12!173;UBERON:0000955!8.17e-12!69;UBERON:0006238!8.17e-12!69;UBERON:0002616!9.16e-12!59;UBERON:0004121!1.56e-11!169;UBERON:0003075!2.01e-11!86;UBERON:0007284!2.01e-11!86;UBERON:0002780!1.05e-09!41;UBERON:0001890!1.05e-09!41;UBERON:0006240!1.05e-09!41;UBERON:0003080!2.92e-09!42;UBERON:0002020!2.26e-08!34;UBERON:0003528!2.26e-08!34;UBERON:0001893!2.97e-08!34;UBERON:0002791!6.03e-08!33;UBERON:0001869!1.04e-07!32;UBERON:0003056!2.37e-07!61;UBERON:0000153!3.45e-07!129;UBERON:0007811!3.45e-07!129;UBERON:0000033!4.02e-07!123;UBERON:0002619!5.13e-07!22 | |ontology_enrichment_uberon=UBERON:0000073!3.52e-18!94;UBERON:0001016!3.52e-18!94;UBERON:0001017!8.62e-17!82;UBERON:0005743!8.97e-17!86;UBERON:0007023!7.40e-14!115;UBERON:0001049!9.93e-13!57;UBERON:0005068!9.93e-13!57;UBERON:0006241!9.93e-13!57;UBERON:0007135!9.93e-13!57;UBERON:0002346!1.77e-12!90;UBERON:0000924!1.83e-12!173;UBERON:0006601!1.83e-12!173;UBERON:0000955!8.17e-12!69;UBERON:0006238!8.17e-12!69;UBERON:0002616!9.16e-12!59;UBERON:0004121!1.56e-11!169;UBERON:0003075!2.01e-11!86;UBERON:0007284!2.01e-11!86;UBERON:0002780!1.05e-09!41;UBERON:0001890!1.05e-09!41;UBERON:0006240!1.05e-09!41;UBERON:0003080!2.92e-09!42;UBERON:0002020!2.26e-08!34;UBERON:0003528!2.26e-08!34;UBERON:0001893!2.97e-08!34;UBERON:0002791!6.03e-08!33;UBERON:0001869!1.04e-07!32;UBERON:0003056!2.37e-07!61;UBERON:0000153!3.45e-07!129;UBERON:0007811!3.45e-07!129;UBERON:0000033!4.02e-07!123;UBERON:0002619!5.13e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;7.19e-15;6!UBERON:0005705;7.08e-11;1!UBERON:0008193;7.08e-11;1!UBERON:0010912;7.08e-11;1!UBERON:0002514;7.08e-11;1!UBERON:0003457;7.08e-11;1!UBERON:0008907;7.08e-11;1!UBERON:0008001;7.08e-11;1!UBERON:0007213;7.08e-11;1!UBERON:0009891;7.08e-11;1!UBERON:0007914;7.08e-11;1!UBERON:0007375;7.08e-11;1!UBERON:0003323;7.08e-11;1!UBERON:0010258;7.08e-11;1!UBERON:0005253;7.08e-11;1!UBERON:0007842;7.08e-11;1!UBERON:0002397;7.08e-11;1!UBERON:0003113;7.08e-11;1!UBERON:0003277;7.08e-11;1!UBERON:0001709;7.08e-11;1!UBERON:0002244;7.08e-11;1!UBERON:0005620;7.08e-11;1!UBERON:0010364;7.08e-11;1!UBERON:0004288;7.08e-11;1!UBERON:0002680;4.24e-10;9!UBERON:0001895;4.24e-10;9!UBERON:0004733;1.07e-07;12!UBERON:0002028;1.07e-07;12!UBERON:0004732;3.84e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.37e-14,6;UBERON:0006215,1.37e-14,6;UBERON:0005705,1.77e-10,1;UBERON:0008193,1.77e-10,1;UBERON:0010912,1.77e-10,1;UBERON:0002514,1.77e-10,1;UBERON:0003457,1.77e-10,1;UBERON:0008907,1.77e-10,1;UBERON:0008001,1.77e-10,1;UBERON:0007213,1.77e-10,1;UBERON:0009891,1.77e-10,1;UBERON:0007914,1.77e-10,1;UBERON:0009292,1.77e-10,1;UBERON:0003099,1.77e-10,1;UBERON:0007375,1.77e-10,1;UBERON:0003323,1.77e-10,1;UBERON:0010258,1.77e-10,1;UBERON:0007842,1.77e-10,1;UBERON:0009494,1.77e-10,1;UBERON:0010042,1.77e-10,1;UBERON:0010045,1.77e-10,1;UBERON:0010259,1.77e-10,1;UBERON:0010359,1.77e-10,1;UBERON:0009526,1.77e-10,1;UBERON:0002397,1.77e-10,1;UBERON:0003113,1.77e-10,1;UBERON:0003277,1.77e-10,1;UBERON:0001709,1.77e-10,1;UBERON:0004066,1.77e-10,1;UBERON:0002244,1.77e-10,1;UBERON:0005620,1.77e-10,1;UBERON:0004362,1.77e-10,1;UBERON:0010364,1.77e-10,1;UBERON:0010046,1.77e-10,1;UBERON:0005868,1.77e-10,1;UBERON:0007238,1.77e-10,1;UBERON:0004288,1.77e-10,1;UBERON:0004068,1.77e-10,1;UBERON:0010334,1.77e-10,1;UBERON:0003852,1.77e-10,1;UBERON:0010253,1.77e-10,1;UBERON:0002680,6.46e-10,9;UBERON:0001895,6.46e-10,9;UBERON:0010092,6.46e-10,9;UBERON:0004733,1.46e-07,12;UBERON:0002028,1.46e-07,12;UBERON:0007277,1.46e-07,12;UBERON:0001016,4.13e-07,89;UBERON:0004121,4.43e-07,171;UBERON:0000924,4.43e-07,171;UBERON:0006601,4.43e-07,171;UBERON:0004732,5.12e-07,13 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0.331397375727916,0,0,0,0.487932798790507,0.984968464614303,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0.522389211897802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0.161646056818812,0.355009592516614,0.302256294682921,0,0,0,0,0.243947412259191,0,0.232387885739037,0.310983165046111,0,0.72995471815166,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,2.36315962672562,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0.207328115540772,0.432359860250884,0,0.063497894292169,1.90994212779139,0,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,1.54657762555539,1.50764638800914,1.27587750330633,0,0,0,0.12269149171914,0,0,0.415941723061614,0.535286966391485,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0,0,1.66435439510497,0.907170879989041,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.386682873168488,0,0.15350367472613,0,0.107420244868274,0,0.170453254832202,0.890320356467374,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0.144269212976445,0,0.159426272728822,0,0,0.423347165447766,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,1.78178808499583,0,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0.20453736500431,0,0.311039587661807,0,0,0,0.197286811273867,0,0,1.93866549219044,0.649376687132959,0,0,0,0,0,0.254253650292766,0,0,0.583209226766509,0.347249989866585,0,0.723578631752448,1.52581736317083,1.10579259931225,1.18219047581419,0.219385397153973,0,0,0.230850775511391,0,0.23056390438806,0,0.108647371922008,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.442287822516696,0,0,0.247127877893006,0,0.202203398942031,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.442306057399416,0,0,0,0.330991955875499,0,0,0.569219092059585,0.277349346026277,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0.677942222341597,0,0,0.316553979779393,0,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0.273810757783986,1.27746588066972,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0.199679000498991,0,0.446342914883745,0.134366944973453,0,0,0.551482276150566,0.412079291905832,0,0.295282444544246,0,1.59045937961861,0.681017030557878,0.643012593860077,0.687697182986169,0.415440338029185,0.2249738915515,0.77380195455795,0.485996453264197,0.335434687599266,0,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0.879313402068495,1.32506888912221,0.387848869084652,0.13223260174269,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0.886068179966986,0.488105059607853,0.3755727921195,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0.936669811613763,0.28984205722165,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0.464033759878494,0,0.800055529326307,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0.255788742607303,0.107824811396682,0.157265941855896,1.20130602011215,0.509197589862076,0.212574920101683,1.11542187833102,0.558644917973244,0.318004350653419,0.236585235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| ||
|short_description=p3@SHF | |short_description=p3@SHF | ||
}} | }} |
Latest revision as of 19:49, 17 September 2015
Short description: | p3@SHF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SHF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000560734_5end |
EntrezGene: | SHF |
HGNC: | 25116 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.05e-15 | 6 |
neuroblast | 7.05e-15 | 6 |
electrically signaling cell | 7.05e-15 | 6 |
neuronal stem cell | 2.66e-11 | 8 |