FFCP PHASE1:Hg19::chr21:19191944..19191991,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:19191944..19191991,-
|short_description=p5@C21orf91
|description=CAGE_peak_5_at_C21orf91_5end
|association_with_transcript=-241bp_to_ENST00000284881,ENST0...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54149 | |EntrezGene=54149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16459 | |HGNC=16459 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYK6,Q68DA1 | |UniProt=Q9NYK6,Q68DA1 | ||
|association_with_transcript=-241bp_to_ENST00000284881,ENST00000400558,ENST00000400559,NM_001100420,NM_001100421,NM_017447,uc002yko.3,uc002ykp.3,uc002ykq.3_5end | |||
|cluster_id=chr21:19191944..19191991,- | |||
|description=CAGE_peak_5_at_C21orf91_5end | |||
|id=chr21:19191944..19191991,- | |||
|ontology_enrichment_celltype=CL:0000542!2.63e-10!53;CL:0000051!2.63e-10!53;CL:0000838!8.30e-10!52;CL:0000037!4.68e-08!172;CL:0000566!4.68e-08!172;CL:0002032!6.07e-08!165;CL:0000837!6.07e-08!165;CL:0002031!1.31e-07!124;CL:0000738!1.80e-07!140;CL:0000988!6.01e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.82e-14;5!CL:0000163;7.43e-08;9!CL:0000945;7.99e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.05e-15,5;CL:0002028,5.05e-15,5;CL:0002031,8.16e-12,120;CL:0000738,1.84e-11,136;CL:0000542,5.59e-11,53;CL:0000051,5.59e-11,53;CL:0000838,8.06e-10,52;CL:0000037,1.88e-09,168;CL:0002032,2.13e-09,161;CL:0000837,2.13e-09,161;CL:0000988,1.40e-08,177;CL:0000163,3.77e-08,9;CL:0000945,9.49e-08,24;CL:0000826,9.49e-08,24;CL:0002087,1.52e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.49e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.26e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;1.11e-11;4!UBERON:0001894;2.78e-10;7!UBERON:0002298;1.86e-07;6!UBERON:0001897;6.31e-07;2!UBERON:0010225;6.31e-07;2!UBERON:0005162;7.84e-07;2!UBERON:0000122;7.84e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,1.31e-11,4;UBERON:0001049,3.06e-11,56;UBERON:0005068,3.06e-11,56;UBERON:0006241,3.06e-11,56;UBERON:0007135,3.06e-11,56;UBERON:0001894,3.20e-10,7;UBERON:0006222,3.20e-10,7;UBERON:0000073,3.64e-09,53;UBERON:0002616,3.64e-09,53;UBERON:0002346,9.07e-09,86;UBERON:0003075,1.96e-08,82;UBERON:0007284,1.96e-08,82;UBERON:0001017,2.81e-07,81;UBERON:0002298,2.97e-07,6;UBERON:0000955,3.51e-07,68;UBERON:0006238,3.51e-07,68;UBERON:0001897,3.79e-07,2;UBERON:0010225,3.79e-07,2;UBERON:0001016,4.61e-07,89;UBERON:0002780,5.59e-07,41;UBERON:0001890,5.59e-07,41;UBERON:0003080,5.59e-07,41;UBERON:0006240,5.59e-07,41 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0.502170558379211,0.993374274723366,0.903106483949403,1.41679406364623,0,0.767658796194425,0,0,0.30120591877825,0,2.16908161624845,1.84820002233648,1.17440175733939,1.10799081706375,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0.290796477559129,0,0,0.464858073811369,0.411167888021826,0.929119112685311,0,0.512321413058201,1.18241114944293,0.344745680736619,1.29096936716765,0,0,0.272906150057846,0.674170453335254,0,0.962787081228281,1.91801137739712,0,0.199463657621632,0.426224750532694,0.580418477257168,0.56738522469114,0,0.75374599577023,0,1.08594422352558,1.21079900526674,2.20966581592539,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,0.853460445133014,1.20118796110804,0.574752439954483,0,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0,1.37696839079683,0,0.822405995998037,0.668745981562712,0.32592226663359,0,0,0.445641827540694,0,0.443067789167242,0.541607727530031,0.128091319725675,0.390178042679635,0.493313713811028,0.552700035571697,0.289803085735052,0.14828656316206,0.267540828089713,0,0.339928028092699,0.383220493601921,0.34362744548263,0.506039384039006,0,0,1.90090408889675,1.80690142893327,1.27986611154418,3.74792179657038,0.710331756132051,0,0.403213486449465,0.534880391567015,0.724122019413995,0,0,0,0.361439152384566,0,0.289693037921647,0.795285947051099,0.486634870302636,0.472674085820339,0.443458794925128,0.351339142772504,0.458426764241994,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0.404132016209064,0.326923806226917,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.413303124703062,0,0,0,0,0.336672227908132,0,0,0.877955241761676,0,0.150238058906597,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0.161646056818812,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0.860413786167011,0.487894824518382,0.397589304964456,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.122988438543114,0.343135620597051,0.219500570817251,0,0.100528972411631,1.29623823221941,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0.858486162094873,0,0,0,0,1.34385702559088,1.13420077793909,0.268675568108545,0.581267877027924,0.383382679165211,1.47798971368783,1.67292024625129,2.07328115540772,1.8735593944205,3.53478813593864,0.571481048629521,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,1.56919201590938,0.197030760201927,0.215627574859517,0.513372145118994,0.76228387266739,0,0.773288812777695,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0.553107505625109,0.173767228936166,0,0,0.82707210449155,0,0.320182673410333,0,1.66435439510497,0,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0.604297247958111,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0.438519753291869,0.261435451024901,0.256450125116389,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0.386682873168488,0.154048617114644,0.15350367472613,0.413509717453592,0.429680979473094,0,0.0852266274161009,0.623224249527161,0.165284915360978,0.192190067365106,0.765676274967505,0.2023155617111,0,0,0,0,0,1.73986598415015,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0.764637207142375,0,0.238231775457789,0.822724546172388,0,0,0.79312517629427,0.534120355637366,1.92495971052672,0.735120647943095,1.48642540100575,0.432807638929335,0.782560276832555,0.797131363644112,0.997896857164083,0.766021480529467,0,0,0.842391534340376,0.684704037099577,0.47003968731907,0,0.50787533340481,0.1605880751037,0.403599414382095,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0.586164286206121,0.278406173895242,0,0.270455678475983,3.66379164797602,0,0,0.439524537815682,0.121360521749513,0.557216921387392,0.568272293612826,0,0,0,0,0.562677665642051,0.445234820091624,0.16480387422676,0.422250816255987,0.19924798825107,1.10513566212459,0.503865495708552,0.306806047506464,1.6001024709939,0,0.269605053441981,0,0,0.295930216910801,0,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| ||
|short_description=p5@C21orf91 | |||
}} | }} |
Latest revision as of 20:36, 17 September 2015
Short description: | p5@C21orf91 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C21orf91_5end |
Coexpression cluster: | NA |
Association with transcript: | -241bp_to_ENST00000284881, ENST00000400558, ENST00000400559, NM_001100420, NM_001100421, NM_017447, uc002yko.3, uc002ykp.3, uc002ykq.3_5end |
EntrezGene: | C21orf91 |
HGNC: | 16459 |
UniProt: | Q9NYK6Q68DA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.05e-15 | 5 |
basophil mast progenitor cell | 5.05e-15 | 5 |
hematopoietic lineage restricted progenitor cell | 8.16e-12 | 120 |
leukocyte | 1.84e-11 | 136 |
lymphocyte | 5.59e-11 | 53 |
common lymphoid progenitor | 5.59e-11 | 53 |
lymphoid lineage restricted progenitor cell | 8.06e-10 | 52 |
hematopoietic stem cell | 1.88e-09 | 168 |
hematopoietic oligopotent progenitor cell | 2.13e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.13e-09 | 161 |
hematopoietic cell | 1.40e-08 | 177 |
endocrine cell | 3.77e-08 | 9 |
lymphocyte of B lineage | 9.49e-08 | 24 |
pro-B cell | 9.49e-08 | 24 |
nongranular leukocyte | 1.52e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 1.31e-11 | 4 |
neural tube | 3.06e-11 | 56 |
neural rod | 3.06e-11 | 56 |
future spinal cord | 3.06e-11 | 56 |
neural keel | 3.06e-11 | 56 |
diencephalon | 3.20e-10 | 7 |
future diencephalon | 3.20e-10 | 7 |
regional part of nervous system | 3.64e-09 | 53 |
regional part of brain | 3.64e-09 | 53 |
neurectoderm | 9.07e-09 | 86 |
neural plate | 1.96e-08 | 82 |
presumptive neural plate | 1.96e-08 | 82 |
central nervous system | 2.81e-07 | 81 |
brainstem | 2.97e-07 | 6 |
brain | 3.51e-07 | 68 |
future brain | 3.51e-07 | 68 |
dorsal plus ventral thalamus | 3.79e-07 | 2 |
thalamic complex | 3.79e-07 | 2 |
nervous system | 4.61e-07 | 89 |
regional part of forebrain | 5.59e-07 | 41 |
forebrain | 5.59e-07 | 41 |
anterior neural tube | 5.59e-07 | 41 |
future forebrain | 5.59e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.26e-07 | 10 |