FFCP PHASE1:Hg19::chr9:77567820..77567837,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55071 | |EntrezGene=55071 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23433 | |HGNC=23433 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IXQ3 | |UniProt=Q8IXQ3 | ||
|association_with_transcript=-18bp_to_ENST00000376854,NM_017998,uc004ajo.3_5end | |association_with_transcript=-18bp_to_ENST00000376854,NM_017998,uc004ajo.3_5end | ||
|cluster_id=chr9:77567820..77567837,- | |||
|description=CAGE_peak_2_at_C9orf40_5end | |description=CAGE_peak_2_at_C9orf40_5end | ||
|id=chr9:77567820..77567837,- | |id=chr9:77567820..77567837,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.01e-11!86;UBERON:0007284!2.01e-11!86;UBERON:0002346!7.08e-11!90;UBERON:0000073!3.81e-10!94;UBERON:0001016!3.81e-10!94;UBERON:0005743!5.17e-10!86;UBERON:0003056!7.49e-10!61;UBERON:0001049!1.09e-09!57;UBERON:0005068!1.09e-09!57;UBERON:0006241!1.09e-09!57;UBERON:0007135!1.09e-09!57;UBERON:0001017!1.43e-09!82;UBERON:0004121!2.43e-08!169;UBERON:0000924!4.04e-08!173;UBERON:0006601!4.04e-08!173;UBERON:0000064!5.61e-08!219;UBERON:0000955!9.71e-08!69;UBERON:0006238!9.71e-08!69;UBERON:0003080!1.61e-07!42;UBERON:0002616!1.91e-07!59;UBERON:0002780!4.91e-07!41;UBERON:0001890!4.91e-07!41;UBERON:0006240!4.91e-07!41 | |ontology_enrichment_uberon=UBERON:0003075!2.01e-11!86;UBERON:0007284!2.01e-11!86;UBERON:0002346!7.08e-11!90;UBERON:0000073!3.81e-10!94;UBERON:0001016!3.81e-10!94;UBERON:0005743!5.17e-10!86;UBERON:0003056!7.49e-10!61;UBERON:0001049!1.09e-09!57;UBERON:0005068!1.09e-09!57;UBERON:0006241!1.09e-09!57;UBERON:0007135!1.09e-09!57;UBERON:0001017!1.43e-09!82;UBERON:0004121!2.43e-08!169;UBERON:0000924!4.04e-08!173;UBERON:0006601!4.04e-08!173;UBERON:0000064!5.61e-08!219;UBERON:0000955!9.71e-08!69;UBERON:0006238!9.71e-08!69;UBERON:0003080!1.61e-07!42;UBERON:0002616!1.91e-07!59;UBERON:0002780!4.91e-07!41;UBERON:0001890!4.91e-07!41;UBERON:0006240!4.91e-07!41 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,3.74e-11,82;UBERON:0007284,3.74e-11,82;UBERON:0002346,1.35e-10,86;UBERON:0003056,1.81e-09,61;UBERON:0001016,2.10e-09,89;UBERON:0001017,2.91e-09,81;UBERON:0001049,3.32e-09,56;UBERON:0005068,3.32e-09,56;UBERON:0006241,3.32e-09,56;UBERON:0007135,3.32e-09,56;UBERON:0010314,5.55e-08,132;UBERON:0000073,6.32e-08,53;UBERON:0002616,6.32e-08,53;UBERON:0010371,8.77e-08,104;UBERON:0004121,1.58e-07,171;UBERON:0000924,1.58e-07,171;UBERON:0006601,1.58e-07,171;UBERON:0000955,1.94e-07,68;UBERON:0006238,1.94e-07,68;UBERON:0002780,5.14e-07,41;UBERON:0001890,5.14e-07,41;UBERON:0003080,5.14e-07,41;UBERON:0006240,5.14e-07,41;UBERON:0011216,5.49e-07,223 | |||
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| ||
|short_description=p2@C9orf40 | |short_description=p2@C9orf40 | ||
}} | }} |
Latest revision as of 21:16, 17 September 2015
Short description: | p2@C9orf40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C9orf40_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000376854, NM_017998, uc004ajo.3_5end |
EntrezGene: | C9orf40 |
HGNC: | 23433 |
UniProt: | Q8IXQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 3.74e-11 | 82 |
presumptive neural plate | 3.74e-11 | 82 |
neurectoderm | 1.35e-10 | 86 |
pre-chordal neural plate | 1.81e-09 | 61 |
nervous system | 2.10e-09 | 89 |
central nervous system | 2.91e-09 | 81 |
neural tube | 3.32e-09 | 56 |
neural rod | 3.32e-09 | 56 |
future spinal cord | 3.32e-09 | 56 |
neural keel | 3.32e-09 | 56 |
structure with developmental contribution from neural crest | 5.55e-08 | 132 |
regional part of nervous system | 6.32e-08 | 53 |
regional part of brain | 6.32e-08 | 53 |
ecto-epithelium | 8.77e-08 | 104 |
ectoderm-derived structure | 1.58e-07 | 171 |
ectoderm | 1.58e-07 | 171 |
presumptive ectoderm | 1.58e-07 | 171 |
brain | 1.94e-07 | 68 |
future brain | 1.94e-07 | 68 |
regional part of forebrain | 5.14e-07 | 41 |
forebrain | 5.14e-07 | 41 |
anterior neural tube | 5.14e-07 | 41 |
future forebrain | 5.14e-07 | 41 |
organ system subdivision | 5.49e-07 | 223 |