FFCP PHASE1:Hg19::chr2:63277948..63277974,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:63277948..63277974,+ to FFCP PHASE1:Hg19::chr2:63277948..63277974,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5013 | |EntrezGene=5013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8521 | |HGNC=8521 | ||
|TSSclassifier=strong | |||
|UniProt=B5MC54 | |UniProt=B5MC54 | ||
|association_with_transcript=0bp_to_ENST00000405984,ENST00000477348,uc002scd.2,uc010ypt.1_5end | |||
|cluster_id=chr2:63277948..63277974,+ | |||
|coexpression_cluster_id=C2590 | |||
|description=CAGE_peak_1_at_OTX1_5end | |||
|id=chr2:63277948..63277974,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.22e-20!254;CL:0000223!2.31e-10!59;CL:0002076!4.50e-09!43;CL:0000076!7.34e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.03e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.76e-17,253;CL:0000223,1.67e-10,58;CL:0002076,1.64e-09,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.24e-30!235;DOID:14566!1.65e-30!239;DOID:0050687!1.40e-24!143;DOID:305!1.33e-21!106;DOID:0050686!9.39e-12!137;DOID:299!7.34e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.17e-20,235;DOID:14566,2.05e-19,239;DOID:0050687,7.34e-17,143;DOID:305,3.09e-16,106;DOID:0050686,7.13e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0003056!6.90e-21!61;UBERON:0002780!7.00e-17!41;UBERON:0001890!7.00e-17!41;UBERON:0006240!7.00e-17!41;UBERON:0001893!9.35e-17!34;UBERON:0000924!1.55e-16!173;UBERON:0006601!1.55e-16!173;UBERON:0002791!2.18e-16!33;UBERON:0003080!4.82e-16!42;UBERON:0001869!6.14e-16!32;UBERON:0004121!7.38e-16!169;UBERON:0000073!2.17e-15!94;UBERON:0001016!2.17e-15!94;UBERON:0005743!2.60e-15!86;UBERON:0000033!5.85e-15!123;UBERON:0000153!8.08e-15!129;UBERON:0007811!8.08e-15!129;UBERON:0002020!1.24e-14!34;UBERON:0003528!1.24e-14!34;UBERON:0000956!7.42e-14!25;UBERON:0000203!7.42e-14!25;UBERON:0002346!2.21e-13!90;UBERON:0001017!2.78e-13!82;UBERON:0003075!9.58e-13!86;UBERON:0007284!9.58e-13!86;UBERON:0000955!3.32e-12!69;UBERON:0006238!3.32e-12!69;UBERON:0002619!1.05e-11!22;UBERON:0001950!1.30e-10!20;UBERON:0002616!8.37e-10!59;UBERON:0001049!3.80e-09!57;UBERON:0005068!3.80e-09!57;UBERON:0006241!3.80e-09!57;UBERON:0007135!3.80e-09!57;UBERON:0001032!9.34e-08!24;UBERON:0004456!9.34e-08!24;UBERON:0000020!1.46e-07!23;UBERON:0000064!1.53e-07!219;UBERON:0007625!2.00e-07!11;UBERON:0000065!2.17e-07!53;UBERON:0002104!6.20e-07!21;UBERON:0008947!9.39e-07!38;UBERON:0003258!9.39e-07!38;UBERON:0000970!9.65e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.20e-17;25!UBERON:0000203;2.20e-17;25!UBERON:0001869;2.29e-17;32!UBERON:0001893;2.58e-17;34!UBERON:0002791;7.52e-17;32!UBERON:0003528;4.29e-15;34!UBERON:0002020;4.29e-15;34!UBERON:0002780;4.40e-15;41!UBERON:0001890;4.40e-15;41!UBERON:0002619;1.21e-14;22!UBERON:0001950;3.21e-13;20!UBERON:0001032;9.57e-10;24!UBERON:0004456;9.57e-10;24!UBERON:0000020;1.61e-09;23!UBERON:0002104;1.82e-09;21!UBERON:0007625;2.82e-09;11!UBERON:0000970;3.01e-09;20!UBERON:0000019;1.93e-08;19!UBERON:0000047;1.93e-08;19!UBERON:0004088;1.93e-08;19!UBERON:0010230;1.93e-08;19!UBERON:0000073;3.09e-08;53!UBERON:0002616;3.09e-08;53!UBERON:0000955;1.00e-07;68!UBERON:0001456;3.88e-07;21!UBERON:0001017;4.76e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.21e-28,61;UBERON:0002780,9.38e-21,41;UBERON:0001890,9.38e-21,41;UBERON:0003080,9.38e-21,41;UBERON:0006240,9.38e-21,41;UBERON:0001893,4.46e-20,34;UBERON:0001869,4.84e-19,32;UBERON:0002791,6.99e-19,32;UBERON:0000956,2.15e-17,25;UBERON:0000203,2.15e-17,25;UBERON:0003528,4.26e-17,34;UBERON:0002020,4.26e-17,34;UBERON:0002346,6.35e-16,86;UBERON:0003075,7.14e-16,82;UBERON:0007284,7.14e-16,82;UBERON:0010371,1.33e-15,104;UBERON:0001017,2.60e-15,81;UBERON:0004121,1.05e-14,171;UBERON:0000924,1.05e-14,171;UBERON:0006601,1.05e-14,171;UBERON:0002619,1.17e-14,22;UBERON:0000955,1.33e-14,68;UBERON:0006238,1.33e-14,68;UBERON:0001016,1.43e-14,89;UBERON:0001950,2.85e-13,20;UBERON:0011216,4.58e-13,223;UBERON:0000073,5.59e-13,53;UBERON:0002616,5.59e-13,53;UBERON:0001049,1.32e-11,56;UBERON:0005068,1.32e-11,56;UBERON:0006241,1.32e-11,56;UBERON:0007135,1.32e-11,56;UBERON:0000020,1.09e-09,24;UBERON:0001032,1.09e-09,24;UBERON:0004456,1.09e-09,24;UBERON:0000970,2.24e-09,21;UBERON:0002104,2.24e-09,21;UBERON:0007625,2.85e-09,11;UBERON:0000019,1.42e-08,20;UBERON:0000047,1.42e-08,20;UBERON:0010312,1.42e-08,20;UBERON:0004088,1.42e-08,20;UBERON:0010230,1.42e-08,20;UBERON:0003072,1.42e-08,20;UBERON:0004128,1.42e-08,20;UBERON:0003071,1.42e-08,20;UBERON:0010314,2.32e-08,132;UBERON:0001456,2.68e-07,22 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,22.3264069962224,18.888670660058,15.8183725889452,3.66784347590166,3.20192298854788,3.54198515911557,0,0,0.154816123316076,4.59710612239464,10.5422071572388,8.50434223383612,0,0.995184627411951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.2156820335559,14.4124108350667,19.0601484954084,1.24430121722827,39.3438911355946,36.3368753928741,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,1.19257444420023,0,0.347140501607594,1.13061588384802,1.25849830862972,0.275118041940067,1.04497483268405,0,0,0,0.402829317109147,0,1.22031028774085,0.367663080345869,0.81014194788176,0,0,0.337834441449967,0,0,0,0,3.87780264148325,7.84969293856562,0,0.379891534993739,0.264818361626438,0,0,0,0,0.49333509683432,0,0,0,4.54072282934794,1.72852777344,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,1.54608682530637,3.00020732649918,2.58124135850103,4.63500083292463,1.72288698817931,3.48581828608555,12.2320044918137,4.79409616663694,0.72995471815166,0,0,0,0,0,1.77460200059766,2.36018566109342,3.13314338848527,1.21323370005633,1.30727666455444,2.37270619111097,1.07865046528132,0.392442930250692,1.92373578473195,0.738155454624648,0,0,0,0,0,0,2.6487785964879,7.50229475112993,19.5587303740319,9.65802511595905,4.49607013030478,5.93120937228622,7.22189872236531,0,0,17.3197610430328,15.9983958865606,21.2509736566837,0.721832238805369,0,0.190254152234598,2.37061319387782,1.71697232418975,0,0,0,0,4.03157107677263,0.425325291727159,0.358234090811393,0.581267877027924,0.766765358330422,0,0,0,0,0.50496973370552,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,1.2329365839288,0,0,0,71.1464947822897,20.8223766172195,17.785642693887,9.88345965472658,18.5002237979417,1.49801404789436,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0,7.49328587468058,1.40354529212299,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87255237721139,15.7447029935859,7.15832468261467,0.103041011647722,2.47237555009527,2.39277549769705,2.87132768998086,6.50060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,1.98341898433174,2.11409074101617,4.46644493731044,1.92199783625545,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0.563391205064483,0,0,0,0,0,0,0,0,5.96577098898175,6.70302275535787,5.44454924306613,0.188287601553558,1.72202149068492,0,1.7737206141467,1.37834040124176,0.507447609232169,0.764637207142375,0.569647187174163,0,0.411362273086194,0.648473311192717,0,0.79312517629427,2.99107399156925,0.962479855263359,2.45040215981032,1.30062222588003,2.30830740762312,2.41882267384608,2.07254154547469,0,0,4.65681881992542,0,0,1.36940807419915,0.783399478865116,0,4.9094615562465,2.56940920165919,0,0.851692475380653,0,51.001966875204,32.4330356444003,49.7210442301487,1.36771666781428,3.06246791284767,3.69262196843137,1.35227839237992,0.33307196799782,0,6.36277837387947,0,3.6408156524854,3.12041475976939,0.568272293612826,0,0.890894042497916,0,5.96488588659779,8.58083440104128,1.78093928036649,0.824019371133798,27.0240522403832,1.9924798825107,0,1.0077309914171,0.306806047506464,0.492339221844278,0,0.988551862620595,2.32727527078292,0,0,0,1.11136990144637,2.90799823828566,1.02044907978036,13.9729658600836,0.520855522170466,1.31189999994294,0,1.365521379426,1.77977555204936,1.65471377237555,1.37897349296586,3.2076507472158,1.90987494426621,2.65722415744152,1.4471572635049,0,0,0,1.97446857438575,5.44692317594951,1.25481369850743,0,0.569710279235006,4.15015027898508,5.11618573135701,2.28159481036217,0.31900115973192,0.0915975934018623,0.533034776018635,1.02193298195737,0.627921025580099,0.166211681900156,3.83512623049207,2.74487548044835,2.68514539161348,1.70778359451767,0,0.632994193584081,1.46909527343233,5.79547592879157,2.16388639742091,0,0,0,0.889563386041866,0.370691816839509,0.835375596043643,4.9876838405701,0,1.87411556580271,2.91927662745066,4.30462161650597,2.18502341580683,0,0,8.87611008728421,0,0.450970258243478,1.03688191397247,2.65861549082874,2.31694369112849,1.56966459203613,1.19472429772959,1.42304773014896,0,2.95051555169723,1.7638631534588,3.4823682632161,0,1.0319161948297,3.57998425769615,3.80064448848165,4.18788830971367,0.581934098930517,2.55942767405351,15.8186518546373,0.274083849293502,1.58971689362392,2.27918865441163,3.91102765469606,2.72539988855215,0.213452994739353,0.999048047910651,2.88180834308212,2.51980511565014,1.20116498503375,2.16082196982225,3.72757606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| ||
|short_description=p1@OTX1 | |||
}} | }} |
Latest revision as of 22:19, 17 September 2015
Short description: | p1@OTX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OTX1_5end |
Coexpression cluster: | C2590_Neural_acute_Corneal_Neurons_Astrocyte_anaplastic_Ciliary |
Association with transcript: | 0bp_to_ENST00000405984, ENST00000477348, uc002scd.2, uc010ypt.1_5end |
EntrezGene: | OTX1 |
HGNC: | 8521 |
UniProt: | B5MC54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.76e-17 | 253 |
endodermal cell | 1.67e-10 | 58 |
endo-epithelial cell | 1.64e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.17e-20 | 235 |
disease of cellular proliferation | 2.05e-19 | 239 |
cell type cancer | 7.34e-17 | 143 |
carcinoma | 3.09e-16 | 106 |
organ system cancer | 7.13e-09 | 137 |