FFCP PHASE1:Hg19::chr1:159174575..159174586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2532 | |EntrezGene=2532 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4035 | |HGNC=4035 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_uc001fto.2_5end | |association_with_transcript=65bp_to_uc001fto.2_5end | ||
|cluster_id=chr1:159174575..159174586,+ | |||
|coexpression_cluster_id=C1251 | |coexpression_cluster_id=C1251 | ||
|description=CAGE_peak_4_at_DARC_5end | |description=CAGE_peak_4_at_DARC_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;9.48e-11;65!UBERON:0006965;3.36e-09;2 | |ontology_enrichment_development_v019=UBERON:0006603;9.48e-11;65!UBERON:0006965;3.36e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;9.94e-09;2 | |ontology_enrichment_disease_v019=DOID:114;9.94e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,1.17e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007023;3.83e-15;114!UBERON:0004732;1.22e-13;13!UBERON:0004151;3.82e-13;3!UBERON:0001896;2.19e-12;3!UBERON:0005290;2.19e-12;3!UBERON:0004733;4.39e-11;12!UBERON:0002028;4.39e-11;12!UBERON:0002298;1.01e-10;6!UBERON:0002081;8.72e-10;2!UBERON:0003127;2.18e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0007023;3.83e-15;114!UBERON:0004732;1.22e-13;13!UBERON:0004151;3.82e-13;3!UBERON:0001896;2.19e-12;3!UBERON:0005290;2.19e-12;3!UBERON:0004733;4.39e-11;12!UBERON:0002028;4.39e-11;12!UBERON:0002298;1.01e-10;6!UBERON:0002081;8.72e-10;2!UBERON:0003127;2.18e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.93e-65,114;UBERON:0003076,2.23e-15,15;UBERON:0003057,2.23e-15,15;UBERON:0004732,1.14e-13,13;UBERON:0004151,4.15e-13,3;UBERON:0001896,3.31e-12,3;UBERON:0005290,3.31e-12,3;UBERON:0010096,3.31e-12,3;UBERON:0004733,4.23e-11,12;UBERON:0002028,4.23e-11,12;UBERON:0007277,4.23e-11,12;UBERON:0002298,1.12e-10,6;UBERON:0002081,8.92e-10,2;UBERON:0010227,8.92e-10,2;UBERON:0003127,1.89e-09,2;UBERON:0001049,1.12e-08,56;UBERON:0005068,1.12e-08,56;UBERON:0006241,1.12e-08,56;UBERON:0007135,1.12e-08,56;UBERON:0003103,3.28e-07,68;UBERON:0003075,3.33e-07,82;UBERON:0007284,3.33e-07,82;UBERON:0001017,3.41e-07,81;UBERON:0001016,3.58e-07,89;UBERON:0010314,3.99e-07,132;UBERON:0011216,4.64e-07,223;UBERON:0002346,9.86e-07,86 | |||
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|short_description=p4@DARC | |short_description=p4@DARC | ||
}} | }} |
Latest revision as of 22:30, 17 September 2015
Short description: | p4@DARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DARC_5end |
Coexpression cluster: | C1251_adipose_heart_left_trachea_dura_cervix_bladder |
Association with transcript: | 65bp_to_uc001fto.2_5end |
EntrezGene: | DARC |
HGNC: | 4035 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.93e-65 | 114 |
posterior neural tube | 2.23e-15 | 15 |
chordal neural plate | 2.23e-15 | 15 |
segmental subdivision of nervous system | 1.14e-13 | 13 |
cardiac chamber | 4.15e-13 | 3 |
medulla oblongata | 3.31e-12 | 3 |
myelencephalon | 3.31e-12 | 3 |
future myelencephalon | 3.31e-12 | 3 |
segmental subdivision of hindbrain | 4.23e-11 | 12 |
hindbrain | 4.23e-11 | 12 |
presumptive hindbrain | 4.23e-11 | 12 |
brainstem | 1.12e-10 | 6 |
cardiac atrium | 8.92e-10 | 2 |
future cardiac atrium | 8.92e-10 | 2 |
open tracheal system trachea | 1.89e-09 | 2 |
neural tube | 1.12e-08 | 56 |
neural rod | 1.12e-08 | 56 |
future spinal cord | 1.12e-08 | 56 |
neural keel | 1.12e-08 | 56 |
compound organ | 3.28e-07 | 68 |
neural plate | 3.33e-07 | 82 |
presumptive neural plate | 3.33e-07 | 82 |
central nervous system | 3.41e-07 | 81 |
nervous system | 3.58e-07 | 89 |
structure with developmental contribution from neural crest | 3.99e-07 | 132 |
organ system subdivision | 4.64e-07 | 223 |
neurectoderm | 9.86e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.17e-08 | 2 |