FFCP PHASE1:Hg19::chr6:31631881..31631910,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7918 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13920 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=346bp_to_DQ892676,DQ895918_5end | |||
|cluster_id=chr6:31631881..31631910,- | |||
|description=CAGE_peak_6_at_GPANK1_5end | |||
|id=chr6:31631881..31631910,- | |||
|ontology_enrichment_celltype=CL:0000055!5.37e-34!180;CL:0000680!4.59e-20!57;CL:0000056!4.59e-20!57;CL:0000355!4.59e-20!57;CL:0000183!1.44e-19!59;CL:0000187!1.92e-18!54;CL:0002371!5.01e-16!591;CL:0000393!1.02e-15!60;CL:0000211!1.02e-15!60;CL:0000192!4.46e-15!42;CL:0000514!4.46e-15!42;CL:0000144!6.06e-14!625;CL:0000220!1.11e-13!246;CL:0000057!1.41e-13!75;CL:0002321!3.61e-13!248;CL:0000359!1.20e-12!32;CL:0000548!6.84e-10!679;CL:0000004!6.84e-10!679;CL:0000255!6.84e-10!679;CL:0000012!1.01e-09!682;CL:0000222!2.37e-09!119;CL:0000723!3.33e-08!436;CL:0000048!1.35e-07!430;CL:0000034!2.00e-07!444;CL:0000003!2.86e-07!722;CL:0000221!7.63e-07!71;CL:0002620!7.94e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.75e-13;32!CL:0000187;9.15e-12;55!CL:0000192;1.97e-11;43!CL:0002570;7.31e-09;8!CL:0000393;2.02e-08;61!CL:0000211;2.02e-08;61!CL:0002551;3.06e-08;6!CL:0000188;1.36e-07;9!CL:0000680;2.15e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.38e-21,58;CL:0000056,1.38e-21,58;CL:0000355,1.38e-21,58;CL:0000187,3.01e-19,55;CL:0000393,4.43e-16,61;CL:0000211,4.43e-16,61;CL:0000192,2.68e-15,43;CL:0000514,2.68e-15,43;CL:0000359,6.59e-14,32;CL:0000057,1.39e-11,76;CL:0000723,2.22e-11,433;CL:0000048,4.47e-11,427;CL:0000222,8.59e-11,121;CL:0000034,1.53e-10,441;CL:0002321,4.43e-10,250;CL:0002570,9.08e-09,8;CL:0002551,3.45e-08,6;CL:0000188,1.06e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;1.21e-12;58!CL:0000514;1.97e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.99e-27!83;UBERON:0002329!9.99e-27!83;UBERON:0003077!9.99e-27!83;UBERON:0003059!9.99e-27!83;UBERON:0007282!9.99e-27!83;UBERON:0009618!9.99e-27!83;UBERON:0007285!9.99e-27!83;UBERON:0004290!1.19e-23!70;UBERON:0000486!3.44e-22!82;UBERON:0001134!1.59e-18!61;UBERON:0002036!1.59e-18!61;UBERON:0003082!1.59e-18!61;UBERON:0002385!8.02e-18!63;UBERON:0001015!8.02e-18!63;UBERON:0000383!8.02e-18!63;UBERON:0005256!1.81e-15!143;UBERON:0003102!2.61e-13!95;UBERON:0002100!6.61e-12!216;UBERON:0001637!2.79e-11!42;UBERON:0003509!2.79e-11!42;UBERON:0004572!2.79e-11!42;UBERON:0004573!2.82e-10!33;UBERON:0004571!2.82e-10!33;UBERON:0000475!3.02e-10!365;UBERON:0001009!4.13e-10!113;UBERON:0004535!8.21e-10!110;UBERON:0002199!1.09e-09!45;UBERON:0002416!1.09e-09!45;UBERON:0003104!1.76e-09!238;UBERON:0009142!1.76e-09!238;UBERON:0002049!6.17e-09!79;UBERON:0007798!6.17e-09!79;UBERON:0000490!6.97e-08!138;UBERON:0002097!1.10e-07!40;UBERON:0001981!4.85e-07!60;UBERON:0007500!4.85e-07!60;UBERON:0004537!4.85e-07!60;UBERON:0006965!4.85e-07!60;UBERON:0002067!7.84e-07!9;UBERON:0004016!7.84e-07!9;UBERON:0010083!7.84e-07!9;UBERON:0000055!9.36e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.04e-10;33!UBERON:0004571;1.04e-10;33!UBERON:0002385;1.94e-10;31!UBERON:0001015;1.94e-10;31!UBERON:0000383;1.94e-10;31!UBERON:0002067;4.69e-10;9!UBERON:0001637;6.17e-10;42!UBERON:0003509;6.17e-10;42!UBERON:0004572;6.17e-10;42!UBERON:0001134;8.27e-07;16!UBERON:0002036;8.27e-07;16!UBERON:0001013;8.29e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.13e-28,78;UBERON:0002329,1.23e-26,71;UBERON:0003059,1.23e-26,71;UBERON:0007282,1.23e-26,71;UBERON:0004290,1.23e-26,71;UBERON:0009618,1.23e-26,71;UBERON:0003077,5.12e-26,72;UBERON:0007285,5.12e-26,72;UBERON:0007524,2.05e-25,73;UBERON:0000486,1.76e-24,83;UBERON:0001134,2.86e-19,62;UBERON:0002036,2.86e-19,62;UBERON:0003082,2.86e-19,62;UBERON:0002385,3.15e-18,64;UBERON:0001015,3.15e-18,64;UBERON:0000383,3.15e-18,64;UBERON:0005256,3.71e-15,122;UBERON:0001637,3.54e-14,42;UBERON:0003509,3.54e-14,42;UBERON:0004572,3.54e-14,42;UBERON:0004573,1.08e-11,33;UBERON:0004571,1.08e-11,33;UBERON:0000490,3.10e-11,148;UBERON:0003102,3.40e-11,99;UBERON:0003104,4.19e-11,160;UBERON:0009142,4.19e-11,160;UBERON:0002067,4.84e-10,9;UBERON:0004016,4.84e-10,9;UBERON:0010083,4.84e-10,9;UBERON:0002100,1.01e-09,199;UBERON:0004535,5.78e-09,109;UBERON:0002199,1.41e-08,46;UBERON:0002416,1.41e-08,46;UBERON:0001009,2.18e-08,112;UBERON:0002049,2.49e-08,78;UBERON:0007798,2.49e-08,78;UBERON:0007500,3.08e-08,59;UBERON:0001981,3.08e-08,59;UBERON:0004537,3.08e-08,59;UBERON:0006965,3.08e-08,59;UBERON:0000055,3.68e-08,68;UBERON:0004872,1.17e-07,83;UBERON:0000119,3.28e-07,309;UBERON:0000926,6.18e-07,315;UBERON:0004120,6.18e-07,315;UBERON:0006603,6.18e-07,315;UBERON:0000483,8.58e-07,306;UBERON:0001013,9.13e-07,14 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,2.53299878168311,8.84407822797563,0.261185628199839,3.68600904752263,10.4670175195864,0,0.263766978228454,0.866364470720326,0,2.01697543935533,2.41077811209591,2.19093027116212,1.95173119516203,1.35433163884467,1.63200552995402,0,0.572471974262113,1.36874425072884,0.251085279189606,0,0.0821005894499457,0,0,0.383829398097213,0,2.75826367343678,5.4217065380085,0.739508020333575,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,0,0.512321413058201,0,0.689491361473237,0,0,0.752969358170419,0,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0.870627715885752,0.56738522469114,0,0,0,0,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0.144846518960824,2.3858578411533,0,0.472674085820339,0.443458794925128,0.43917392846563,0.0654895377488563,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0.694281003215189,0.56530794192401,0,1.10047216776027,0,1.29208379584664,0,0.33472061276467,0,0,0,1.10298924103761,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0.436094052142534,0.993943903390637,1.39293562831038,0.529636723252875,0,1.06400514659507,0,0,0.98667019366864,0.311211035399766,1.21239604862719,1.30769522490767,0.908144565869588,1.15235184896,3.98346434117454,29.0308871452198,23.3893446833224,7.77133138869366,5.04968344168189,5.17993421978021,7.44389275521917,7.96201267894084,5.52754427902956,2.27316718586684,2.37600571456411,0.989067717114227,9.10161361938026,5.03032699271367,5.21841953257605,3.75355559615892,6.09541054065202,1.31693286264251,2.75839016219118,2.55404700141215,1.24775401476023,0.538168907066586,0.427114777637135,1.27159140695737,1.80054657650641,1.33968288009971,0.515281080091258,0.744467425326359,0.675105328965065,1.85130309806277,0.504867548488229,0.644349290496095,0.323292113637624,0,0.906768884048762,2.7129694769678,1.93260853163297,1.63647672354501,2.58124135850103,0,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,5.52539685409922,0.928735856063958,2.16563844500876,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,1.3725424823882,1.75600456653801,5.62008766288098,0.804231779293047,0.277765335475589,0.651616610620649,5.19967392639789,0,0,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0.445893486866185,5.62403003920662,0.503946384596579,1.70130116690864,0.53735113621709,4.35950907770943,3.06706143332169,0,0,0,0,0.12624243342638,0.380987365753014,3.81988425558278,0,1.71072446022705,0.616964956219941,7.50857644609794,0.285826432630578,1.56983518083505,0.87192013766656,2.56684000373325,0.129271715757778,3.57656445851882,14.370146793452,0.531876233169741,3.12022310734098,4.62973273671856,2.83698264046557,4.79559922228979,0.142977993658148,1.08524321078289,0,13.6809197403369,0.355391948742546,2.37585561880029,0,0,0.099972991182057,0,0,0,0.718874566474748,0,4.27910715122155,3.76431397335706,5.95881335396112,2.32779252211864,0,0,0,0,0.76228387266739,0,0,0.670065061337395,0,0.749007023947182,0,0,0.12269149171914,0.500170521059677,0,1.03985430765404,0.356857977594324,0.315404830067869,0.35142424497814,0,0,2.0694614258501,1.32845119707087,1.47495334833363,2.17209036170207,0.391602314925481,0.686286847621712,0,0,0,0.606255142892519,1.66435439510497,0,0,0.153461973288062,0.561320188866147,0,0,0.321707842287215,0,15.4209693802656,9.05564799096948,19.4641359752728,7.78881643775432,15.9208218490144,0,1.00253235151642,0.0920809889358963,1.49258782613989,4.00600569614778,0.655622074797121,0,0.0770153371044148,0,1.46139224653261,0.316654886678627,1.13733384070897,1.19065593693561,0.863663664408557,0,1.35473218771926,1.50506932156456,1.01950509218015,0,2.23874754722178,0.219259876645935,0.784306353074702,0,0,0,0,0.0915694648183434,0.495056999523528,2.29706215198469,1.95018073810956,3.21367859688319,3.28680442193215,7.39433362150293,5.06562126596228,7.02966519671106,2.68550612170684,1.74020032697074,8.77834262385839,0.178064071293475,0.165284915360978,0.192190067365106,0.893288987462089,0.10115778085555,0.929691098594572,0.31481234683064,9.0614845120878,1.84820148105653,4.25844824253617,8.69932992075073,3.33583594387056,1.14499909393593,0.372158369359667,0.316379424718726,0.38126038784765,3.07077349573601,0,3.5002357271853,2.35484592059769,0.719489830333259,3.0199073270966,2.47406044925942,7.07638685506606,3.17020642346017,8.42516912477962,1.95053495635836,1.21856744815642,4.22600587027022,0.9554993798559,0.141405431953713,1.13008116620243,2.75682671773062,3.3171948762061,1.31535265576129,7.52408194546694,0,3.04365565444056,1.54911749049875,3.3803472303869,0.717056761020258,0.0982490410131212,1.07001315444375,7.44998234548255,0.211107635297664,1.31717957183961,10.62524886544,1.39973888097993,1.34710957815717,2.68120910214315,0,0,0,0,0,0,3.55213326462519,3.82318603571188,1.70894156152249,1.19115887728894,0.822724546172388,0.648473311192717,1.62009431171434,2.37937552888281,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,1.48171507906718,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,8.90899756464776,0,2.43410110628385,0,1.4098700508785,0,0.146508179271894,0.242721043499027,0,2.27308917445131,0,0,0,0,0,0,0.494411622680279,0,0,0.276283915531148,0,0.613612095012929,0,0,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.183195186803725,0,0,2.04074333313532,0.166211681900156,4.51191321234361,3.13700054908383,8.89454410971966,1.70778359451767,0.158936578980379,0.421996129056054,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0.485560759068186,0,0,0,0.189559738885464,19.842691362713,0.414752765588989,1.99396161812156,0.661983911750998,2.82539626566503,1.19472429772959,0.284609546029793,0,0,0,0,0,0.687944129886466,0.0967563312890851,0.0730893170861856,0.246346371159628,0.0969890164884194,0.0882561266915003,0,2.32971271899477,11.9228767021794,0,0,0.160317640503067,0,0,0,0.114536596165916,0,0,0.869767748958028,0.471388069233591,0.815425236441684,1.04602846312333,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,1.43574604915363,0.199679000498991,0.429226048136571,0.89268582976749,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0.77380195455795,0,0,0.236417121897595,0.0524545881349981,5.28001682597032,0.179287339332845,0,0,0,0,0.542999601753713,1.72844298240254,2.61269888087527,0,10.3436576144167,8.00823702391482,0.339936274560377,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0.0620964029413835,0.415045904808692,0.37494122388632,0.151649117541648,0,0.705797459094515,0,0.434763085832475,9.55230738475994,3.03827302801392,13.3153406760627,1.32582103692562,0.754703705257725,0,1.37304041038154,1.20984739010591,4.50767881690063,6.80133689952316,1.11507737014592,4.04822800947244,3.10525913752519,2.07353103920428,0.797525143673985,0.521745061811734,0.300515217994437,0,1.22061219961398,5.09176245767166,0.644463342254931,0,0.796191777397232,0.800055529326307,1.03018711554838,1.6837474438296,1.26184898228651,0,0,0,0,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0.194860308839388,0,0,0.327609848846413,0.491545817507439,0.211312123358627,0,0,0,0,4.60264875629602,0,0,0,8.08686085475114,0,0.109209638192014,0,0,0,0,1.59002175326709,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0.115525666150338,0,16.5686382254424,0.198916222116275,0.0752103283492573,5.44603685499504,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0.175871244359621,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0,0.354581522651905,0.667388411352415,0,0,0,0,0.431855182437243,0.47775168788705,0.0714765441766563,0.158013611732727,1.16241425368125,0,0.801711364730253,2.27937780579341,0.3414369541879,0,0.430227358820278,1.30165200803622,1.53384128566484,0.423387050190929,0,0,0.955538938977433,0,0.098150233615243,0,0.647428837187895,0.205325613712494,0,0,0,0.198950775161368,0,0.11294608203896,0.109940516745429,0.301925687133347,0.385870790539723,0,0,0,0,0.196308467114945,0,0.4226557275834,1.52934403219035,0,0,0,0,17.2918487140689,0,0,0,0,0.473314686579554,0,0.436350690340377,0,1.11598505450025,0.924351257262837,0.865253124247578,0,0.109265571963696,0,0.61193297845189,0,0,0,0,0.535928260312357,0,0,0,0,0,0.0620747142958579,0.448527450322454,0.12729431655633,0,0,0,0.0673520530145875,0.358611026963382,0.332660356546013,0.162806537221949,0.426909383510862,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p6@GPANK1 | |||
}} |
Latest revision as of 22:57, 17 September 2015
Short description: | p6@GPANK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPANK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 346bp_to_DQ892676, DQ895918_5end |
EntrezGene: | GPANK1 |
HGNC: | 13920 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.38e-21 | 58 |
myoblast | 1.38e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.38e-21 | 58 |
muscle cell | 3.01e-19 | 55 |
electrically responsive cell | 4.43e-16 | 61 |
electrically active cell | 4.43e-16 | 61 |
smooth muscle cell | 2.68e-15 | 43 |
smooth muscle myoblast | 2.68e-15 | 43 |
vascular associated smooth muscle cell | 6.59e-14 | 32 |
fibroblast | 1.39e-11 | 76 |
somatic stem cell | 2.22e-11 | 433 |
multi fate stem cell | 4.47e-11 | 427 |
mesodermal cell | 8.59e-11 | 121 |
stem cell | 1.53e-10 | 441 |
embryonic cell | 4.43e-10 | 250 |
mesenchymal stem cell of adipose | 9.08e-09 | 8 |
fibroblast of dermis | 3.45e-08 | 6 |
cell of skeletal muscle | 1.06e-07 | 9 |