FFCP PHASE1:Hg19::chr11:450255..450334,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81490 | |EntrezGene=81490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15463 | |HGNC=15463 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BVG9,E9PLE4 | |UniProt=Q9BVG9,E9PLE4 | ||
|association_with_transcript=0bp_to_ENST00000308020,ENST00000528617,ENST00000531520,NM_030783,uc001lpj.2,uc009ybv.1_5end | |association_with_transcript=0bp_to_ENST00000308020,ENST00000528617,ENST00000531520,NM_030783,uc001lpj.2,uc009ybv.1_5end | ||
|cluster_id=chr11:450255..450334,+ | |||
|description=CAGE_peak_1_at_PTDSS2_5end | |description=CAGE_peak_1_at_PTDSS2_5end | ||
|id=chr11:450255..450334,+ | |id=chr11:450255..450334,+ | ||
|ontology_enrichment_celltype=CL:0000220!1.49e-15!246;CL:0002321!3.25e-15!248;CL:0000066!2.03e-12!254;CL:0000222!3.89e-11!119;CL:0000359!2.80e-09!32;CL:0000192!4.79e-09!42;CL:0000514!4.79e-09!42;CL:0000183!7.32e-09!59;CL:0000055!1.13e-07!180;CL:0000187!1.98e-07!54;CL:0000680!2.29e-07!57;CL:0000056!2.29e-07!57;CL:0000355!2.29e-07!57;CL:0000393!6.52e-07!60;CL:0000211!6.52e-07!60;CL:1000449!7.82e-07!16;CL:1000497!9.52e-07!18;CL:0002518!9.52e-07!18 | |ontology_enrichment_celltype=CL:0000220!1.49e-15!246;CL:0002321!3.25e-15!248;CL:0000066!2.03e-12!254;CL:0000222!3.89e-11!119;CL:0000359!2.80e-09!32;CL:0000192!4.79e-09!42;CL:0000514!4.79e-09!42;CL:0000183!7.32e-09!59;CL:0000055!1.13e-07!180;CL:0000187!1.98e-07!54;CL:0000680!2.29e-07!57;CL:0000056!2.29e-07!57;CL:0000355!2.29e-07!57;CL:0000393!6.52e-07!60;CL:0000211!6.52e-07!60;CL:1000449!7.82e-07!16;CL:1000497!9.52e-07!18;CL:0002518!9.52e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.91e-09;32!CL:0000192;4.62e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.60e-15,250;CL:0000066,3.08e-12,253;CL:0000222,2.05e-11,121;CL:0000359,2.80e-09,32;CL:0000192,3.02e-09,43;CL:0000514,3.02e-09,43;CL:0000187,1.28e-07,55;CL:0000680,1.48e-07,58;CL:0000056,1.48e-07,58;CL:0000355,1.48e-07,58;CL:0000393,4.28e-07,61;CL:0000211,4.28e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;4.62e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.17e-13!347;UBERON:0000475!1.46e-13!365;UBERON:0002100!6.22e-13!216;UBERON:0000119!1.61e-12!312;UBERON:0000483!1.79e-12!309;UBERON:0003914!1.80e-12!118;UBERON:0003104!4.29e-12!238;UBERON:0009142!4.29e-12!238;UBERON:0005256!3.86e-11!143;UBERON:0000486!5.15e-10!82;UBERON:0001637!6.67e-10!42;UBERON:0003509!6.67e-10!42;UBERON:0004572!6.67e-10!42;UBERON:0000477!6.92e-10!286;UBERON:0003103!9.11e-10!69;UBERON:0004872!1.69e-09!84;UBERON:0009569!2.81e-09!113;UBERON:0001981!5.23e-09!60;UBERON:0007500!5.23e-09!60;UBERON:0004537!5.23e-09!60;UBERON:0006965!5.23e-09!60;UBERON:0004111!1.36e-08!241;UBERON:0000025!2.48e-08!194;UBERON:0004573!3.44e-08!33;UBERON:0004571!3.44e-08!33;UBERON:0004290!3.45e-08!70;UBERON:0002049!3.80e-08!79;UBERON:0007798!3.80e-08!79;UBERON:0000055!5.10e-08!69;UBERON:0002113!1.03e-07!27;UBERON:0003918!1.03e-07!27;UBERON:0005095!1.03e-07!27;UBERON:0007687!1.03e-07!27;UBERON:0000064!1.03e-07!219;UBERON:0000489!1.27e-07!32;UBERON:0001008!1.86e-07!45;UBERON:0005177!1.92e-07!107;UBERON:0000490!2.10e-07!138;UBERON:0006554!2.13e-07!44;UBERON:0001134!2.14e-07!61;UBERON:0002036!2.14e-07!61;UBERON:0003082!2.14e-07!61;UBERON:0000914!2.83e-07!83;UBERON:0002329!2.83e-07!83;UBERON:0003077!2.83e-07!83;UBERON:0003059!2.83e-07!83;UBERON:0007282!2.83e-07!83;UBERON:0009618!2.83e-07!83;UBERON:0007285!2.83e-07!83;UBERON:0000353!5.94e-07!17;UBERON:0004211!7.82e-07!16;UBERON:0001285!7.82e-07!16;UBERON:0007684!7.82e-07!16;UBERON:0003220!7.82e-07!16;UBERON:0004208!7.82e-07!16;UBERON:0006555!8.30e-07!17;UBERON:0005103!8.30e-07!17;UBERON:0000083!8.30e-07!17;UBERON:0009201!8.30e-07!17;UBERON:0004819!8.30e-07!17;UBERON:0006553!8.30e-07!17;UBERON:0003074!8.30e-07!17;UBERON:0003060!8.30e-07!17;UBERON:0002385!9.95e-07!63;UBERON:0001015!9.95e-07!63;UBERON:0000383!9.95e-07!63 | |ontology_enrichment_uberon=UBERON:0000481!1.17e-13!347;UBERON:0000475!1.46e-13!365;UBERON:0002100!6.22e-13!216;UBERON:0000119!1.61e-12!312;UBERON:0000483!1.79e-12!309;UBERON:0003914!1.80e-12!118;UBERON:0003104!4.29e-12!238;UBERON:0009142!4.29e-12!238;UBERON:0005256!3.86e-11!143;UBERON:0000486!5.15e-10!82;UBERON:0001637!6.67e-10!42;UBERON:0003509!6.67e-10!42;UBERON:0004572!6.67e-10!42;UBERON:0000477!6.92e-10!286;UBERON:0003103!9.11e-10!69;UBERON:0004872!1.69e-09!84;UBERON:0009569!2.81e-09!113;UBERON:0001981!5.23e-09!60;UBERON:0007500!5.23e-09!60;UBERON:0004537!5.23e-09!60;UBERON:0006965!5.23e-09!60;UBERON:0004111!1.36e-08!241;UBERON:0000025!2.48e-08!194;UBERON:0004573!3.44e-08!33;UBERON:0004571!3.44e-08!33;UBERON:0004290!3.45e-08!70;UBERON:0002049!3.80e-08!79;UBERON:0007798!3.80e-08!79;UBERON:0000055!5.10e-08!69;UBERON:0002113!1.03e-07!27;UBERON:0003918!1.03e-07!27;UBERON:0005095!1.03e-07!27;UBERON:0007687!1.03e-07!27;UBERON:0000064!1.03e-07!219;UBERON:0000489!1.27e-07!32;UBERON:0001008!1.86e-07!45;UBERON:0005177!1.92e-07!107;UBERON:0000490!2.10e-07!138;UBERON:0006554!2.13e-07!44;UBERON:0001134!2.14e-07!61;UBERON:0002036!2.14e-07!61;UBERON:0003082!2.14e-07!61;UBERON:0000914!2.83e-07!83;UBERON:0002329!2.83e-07!83;UBERON:0003077!2.83e-07!83;UBERON:0003059!2.83e-07!83;UBERON:0007282!2.83e-07!83;UBERON:0009618!2.83e-07!83;UBERON:0007285!2.83e-07!83;UBERON:0000353!5.94e-07!17;UBERON:0004211!7.82e-07!16;UBERON:0001285!7.82e-07!16;UBERON:0007684!7.82e-07!16;UBERON:0003220!7.82e-07!16;UBERON:0004208!7.82e-07!16;UBERON:0006555!8.30e-07!17;UBERON:0005103!8.30e-07!17;UBERON:0000083!8.30e-07!17;UBERON:0009201!8.30e-07!17;UBERON:0004819!8.30e-07!17;UBERON:0006553!8.30e-07!17;UBERON:0003074!8.30e-07!17;UBERON:0003060!8.30e-07!17;UBERON:0002385!9.95e-07!63;UBERON:0001015!9.95e-07!63;UBERON:0000383!9.95e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.79e-09;30!UBERON:0001008;1.79e-09;30!UBERON:0002113;1.08e-07;24!UBERON:0011143;1.08e-07;24!UBERON:0000489;1.30e-07;29!UBERON:0004573;1.94e-07;33!UBERON:0004571;1.94e-07;33!UBERON:0001637;2.32e-07;42!UBERON:0003509;2.32e-07;42!UBERON:0004572;2.32e-07;42 | |||
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| ||
|short_description=p1@PTDSS2 | |short_description=p1@PTDSS2 | ||
}} | }} |
Latest revision as of 00:55, 18 September 2015
Short description: | p1@PTDSS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTDSS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000308020, ENST00000528617, ENST00000531520, NM_030783, uc001lpj.2, uc009ybv.1_5end |
EntrezGene: | PTDSS2 |
HGNC: | 15463 |
UniProt: | Q9BVG9E9PLE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.60e-15 | 250 |
epithelial cell | 3.08e-12 | 253 |
mesodermal cell | 2.05e-11 | 121 |
vascular associated smooth muscle cell | 2.80e-09 | 32 |
smooth muscle cell | 3.02e-09 | 43 |
smooth muscle myoblast | 3.02e-09 | 43 |
muscle cell | 1.28e-07 | 55 |
muscle precursor cell | 1.48e-07 | 58 |
myoblast | 1.48e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.48e-07 | 58 |
electrically responsive cell | 4.28e-07 | 61 |
electrically active cell | 4.28e-07 | 61 |