FFCP PHASE1:Hg19::chr1:40810516..40810538,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64744 | |EntrezGene=64744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25082 | |HGNC=25082 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000435168_5end | |association_with_transcript=0bp_to_ENST00000435168_5end | ||
|cluster_id=chr1:40810516..40810538,+ | |||
|coexpression_cluster_id=C2301 | |coexpression_cluster_id=C2301 | ||
|description=CAGE_peak_5_at_SMAP2_5end | |description=CAGE_peak_5_at_SMAP2_5end | ||
|id=chr1:40810516..40810538,+ | |id=chr1:40810516..40810538,+ | ||
|ontology_enrichment_celltype=CL:0002194!5.54e-49!63;CL:0000576!5.54e-49!63;CL:0000040!5.54e-49!63;CL:0000559!5.54e-49!63;CL:0002057!5.80e-49!42;CL:0002009!7.75e-49!65;CL:0000766!3.29e-47!76;CL:0000860!1.28e-44!45;CL:0000557!4.49e-43!71;CL:0000839!3.51e-42!70;CL:0000738!1.59e-39!140;CL:0002087!1.75e-36!119;CL:0000763!2.43e-33!112;CL:0000049!2.43e-33!112;CL:0002031!3.57e-31!124;CL:0000037!2.65e-29!172;CL:0000566!2.65e-29!172;CL:0002032!3.59e-28!165;CL:0000837!3.59e-28!165;CL:0000988!6.46e-28!182;CL:0002393!5.08e-13!9;CL:0002397!5.08e-13!9;CL:0000990!1.44e-07!8 | |ontology_enrichment_celltype=CL:0002194!5.54e-49!63;CL:0000576!5.54e-49!63;CL:0000040!5.54e-49!63;CL:0000559!5.54e-49!63;CL:0002057!5.80e-49!42;CL:0002009!7.75e-49!65;CL:0000766!3.29e-47!76;CL:0000860!1.28e-44!45;CL:0000557!4.49e-43!71;CL:0000839!3.51e-42!70;CL:0000738!1.59e-39!140;CL:0002087!1.75e-36!119;CL:0000763!2.43e-33!112;CL:0000049!2.43e-33!112;CL:0002031!3.57e-31!124;CL:0000037!2.65e-29!172;CL:0000566!2.65e-29!172;CL:0002032!3.59e-28!165;CL:0000837!3.59e-28!165;CL:0000988!6.46e-28!182;CL:0002393!5.08e-13!9;CL:0002397!5.08e-13!9;CL:0000990!1.44e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;7.25e-48;39!CL:0000234;7.25e-48;39!CL:0000576;1.22e-47;48!CL:0000860;5.01e-47;33!CL:0002057;5.01e-47;33!CL:0000766;1.10e-35;69!CL:0000763;1.47e-16;100!CL:0002087;1.89e-16;104!CL:0002393;3.79e-15;6!CL:0002397;3.79e-15;6!CL:0000738;9.07e-15;136!CL:0000990;1.89e-10;8!CL:0000235;3.73e-10;6!CL:0000988;1.45e-09;177!CL:0000875;1.68e-09;3!CL:0002396;1.68e-09;3!CL:0002619;6.78e-09;3!CL:0000451;2.16e-08;10!CL:0000767;2.80e-08;3!CL:0000226;5.74e-08;3!CL:0000842;5.74e-08;3!CL:0000094;8.33e-08;8!CL:0000219;1.68e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.30e-87,59;CL:0000576,1.30e-87,59;CL:0000040,1.30e-87,59;CL:0000559,1.30e-87,59;CL:0000766,8.32e-87,72;CL:0002009,2.41e-84,61;CL:0000473,1.06e-83,48;CL:0000234,1.06e-83,48;CL:0000839,5.04e-77,66;CL:0000557,1.09e-75,67;CL:0000860,1.55e-74,42;CL:0002057,1.55e-74,42;CL:0000738,4.97e-64,136;CL:0000763,2.72e-63,108;CL:0000049,2.72e-63,108;CL:0002087,1.86e-57,115;CL:0000037,1.47e-50,168;CL:0002031,6.16e-48,120;CL:0002032,1.04e-47,161;CL:0000837,1.04e-47,161;CL:0000988,3.66e-47,177;CL:0002393,8.36e-23,9;CL:0002397,8.36e-23,9;CL:0000134,2.99e-16,354;CL:0002320,1.27e-15,361;CL:0000219,2.07e-13,386;CL:0000048,1.00e-10,427;CL:0000990,1.82e-10,8;CL:0000723,2.35e-10,433;CL:0000235,3.35e-10,6;CL:0000034,7.00e-10,441;CL:0000875,1.71e-09,3;CL:0002396,1.71e-09,3;CL:0002619,6.80e-09,3;CL:0000451,2.10e-08,10;CL:0000767,2.64e-08,3;CL:0000226,4.91e-08,3;CL:0000842,4.91e-08,3;CL:0000094,7.25e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.44e-53;42!CL:0000049;5.90e-18;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.49e-49!102;UBERON:0003061!6.49e-49!102;UBERON:0002193!1.38e-45!112;UBERON:0002371!7.89e-38!80;UBERON:0001474!7.65e-34!86;UBERON:0002405!1.15e-29!115;UBERON:0004765!2.40e-28!101;UBERON:0001434!2.40e-28!101;UBERON:0007023!1.96e-18!115;UBERON:0003081!3.40e-18!216;UBERON:0002204!3.83e-15!167;UBERON:0000178!7.71e-12!15;UBERON:0000179!7.71e-12!15;UBERON:0000463!7.71e-12!15 | |ontology_enrichment_uberon=UBERON:0002390!6.49e-49!102;UBERON:0003061!6.49e-49!102;UBERON:0002193!1.38e-45!112;UBERON:0002371!7.89e-38!80;UBERON:0001474!7.65e-34!86;UBERON:0002405!1.15e-29!115;UBERON:0004765!2.40e-28!101;UBERON:0001434!2.40e-28!101;UBERON:0007023!1.96e-18!115;UBERON:0003081!3.40e-18!216;UBERON:0002204!3.83e-15!167;UBERON:0000178!7.71e-12!15;UBERON:0000179!7.71e-12!15;UBERON:0000463!7.71e-12!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.55e-11;15!UBERON:0000179;3.55e-11;15!UBERON:0000463;3.55e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.57e-76,98;UBERON:0003061,9.57e-76,98;UBERON:0002193,3.65e-70,108;UBERON:0002371,2.87e-68,76;UBERON:0001474,2.49e-62,82;UBERON:0002405,9.99e-59,93;UBERON:0004765,1.24e-55,90;UBERON:0001434,9.25e-49,100;UBERON:0003081,5.38e-30,203;UBERON:0002204,6.24e-24,167;UBERON:0000926,7.96e-15,315;UBERON:0004120,7.96e-15,315;UBERON:0006603,7.96e-15,315;UBERON:0002384,9.18e-15,371;UBERON:0000178,3.54e-11,15;UBERON:0000179,3.54e-11,15;UBERON:0000463,3.54e-11,15 | |||
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|short_description=p5@SMAP2 | |short_description=p5@SMAP2 | ||
}} | }} |
Latest revision as of 01:14, 18 September 2015
Short description: | p5@SMAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SMAP2_5end |
Coexpression cluster: | C2301_CD14CD16_CD14_migratory_Dendritic_Basophils_Macrophage_myeloma |
Association with transcript: | 0bp_to_ENST00000435168_5end |
EntrezGene: | SMAP2 |
HGNC: | 25082 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.57e-76 | 98 |
blood island | 9.57e-76 | 98 |
hemolymphoid system | 3.65e-70 | 108 |
bone marrow | 2.87e-68 | 76 |
bone element | 2.49e-62 | 82 |
immune system | 9.99e-59 | 93 |
skeletal element | 1.24e-55 | 90 |
skeletal system | 9.25e-49 | 100 |
lateral plate mesoderm | 5.38e-30 | 203 |
musculoskeletal system | 6.24e-24 | 167 |
mesoderm | 7.96e-15 | 315 |
mesoderm-derived structure | 7.96e-15 | 315 |
presumptive mesoderm | 7.96e-15 | 315 |
connective tissue | 9.18e-15 | 371 |
blood | 3.54e-11 | 15 |
haemolymphatic fluid | 3.54e-11 | 15 |
organism substance | 3.54e-11 | 15 |