FFCP PHASE1:Hg19::chr13:78109818..78109850,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8796 | |EntrezGene=8796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10573 | |HGNC=10573 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2X8 | |UniProt=F2Z2X8 | ||
|association_with_transcript=-8bp_to_ENST00000471491_5end | |association_with_transcript=-8bp_to_ENST00000471491_5end | ||
|cluster_id=chr13:78109818..78109850,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_1_at_SCEL_5end | |description=CAGE_peak_1_at_SCEL_5end | ||
|id=chr13:78109818..78109850,+ | |id=chr13:78109818..78109850,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.53e-28!254;CL:0002076!1.52e-24!43;CL:0000223!7.25e-16!59;CL:0002251!3.71e-12!21;CL:0002368!1.01e-07!13;CL:0002159!5.07e-07!13;CL:0000082!5.39e-07!19 | |ontology_enrichment_celltype=CL:0000066!5.53e-28!254;CL:0002076!1.52e-24!43;CL:0000223!7.25e-16!59;CL:0002251!3.71e-12!21;CL:0002368!1.01e-07!13;CL:0002159!5.07e-07!13;CL:0000082!5.39e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.27e-21;42!CL:0002251;1.26e-11;20!CL:0002368;2.94e-11;13!CL:0000349;4.84e-10;19!CL:0002149;5.62e-07;6!CL:0002255;5.62e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.79e-28,42;CL:0000066,5.56e-26,253;CL:0000223,1.04e-19,58;CL:0002251,1.26e-11,20;CL:0002368,2.73e-11,13;CL:0000349,5.01e-10,19;CL:0002149,5.70e-07,6;CL:0002255,5.70e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;1.16e-10;58 | |||
|ontology_enrichment_disease=DOID:305!4.10e-14!106;DOID:1749!2.60e-12!14;DOID:0050687!2.65e-08!143;DOID:299!8.17e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.01e-17;14!DOID:3001;5.62e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.84e-18,14;DOID:305,3.25e-14,106;DOID:0050687,3.61e-09,143;DOID:3001,5.70e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.48e-19!169;UBERON:0000925!2.48e-19!169;UBERON:0006595!2.48e-19!169;UBERON:0001004!8.79e-17!72;UBERON:0001007!1.79e-14!155;UBERON:0001555!1.79e-14!155;UBERON:0007026!1.79e-14!155;UBERON:0000077!1.61e-12!130;UBERON:0000161!4.14e-12!35;UBERON:0005631!7.48e-12!14;UBERON:0000158!7.48e-12!14;UBERON:0000065!7.65e-12!53;UBERON:0005181!1.91e-11!35;UBERON:0004921!4.34e-11!129;UBERON:0004185!4.34e-11!129;UBERON:0005178!7.58e-11!34;UBERON:0002224!7.58e-11!34;UBERON:0005911!1.41e-10!82;UBERON:0000064!2.21e-10!219;UBERON:0005153!5.65e-10!37;UBERON:0000464!6.63e-10!104;UBERON:0000166!7.78e-10!21;UBERON:0002048!1.25e-09!22;UBERON:0000117!1.25e-09!22;UBERON:0000171!1.25e-09!22;UBERON:0000170!1.25e-09!22;UBERON:0005597!1.25e-09!22;UBERON:0000118!1.25e-09!22;UBERON:0001444!3.99e-09!48;UBERON:0000062!5.69e-09!511;UBERON:0000344!7.38e-09!12;UBERON:0003124!1.16e-08!7;UBERON:0004807!2.13e-08!28;UBERON:0005157!2.36e-08!51;UBERON:0005795!5.56e-08!22;UBERON:0000466!7.27e-08!126;UBERON:0003975!8.23e-08!22;UBERON:0001041!1.50e-07!98;UBERON:0000165!2.32e-07!28;UBERON:0000930!2.32e-07!28;UBERON:0004175!2.58e-07!25;UBERON:0000995!3.64e-07!21;UBERON:0000072!3.64e-07!46;UBERON:0004802!5.39e-07!19;UBERON:0000115!5.39e-07!19;UBERON:0008947!5.66e-07!38;UBERON:0003258!5.66e-07!38;UBERON:0005156!9.53e-07!59;UBERON:0000990!9.53e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.86e-11;10!UBERON:0000158;2.86e-11;10!UBERON:0000478;1.67e-10;24!UBERON:0000974;3.30e-10;6!UBERON:0005178;3.60e-10;34!UBERON:0002224;3.60e-10;34!UBERON:0002048;4.46e-10;22!UBERON:0000117;4.46e-10;22!UBERON:0000171;4.46e-10;22!UBERON:0000170;4.46e-10;22!UBERON:0004807;8.57e-10;22!UBERON:0005181;1.14e-09;35!UBERON:0001004;2.74e-09;65!UBERON:0000165;2.77e-09;28!UBERON:0000161;6.75e-09;19!UBERON:0000166;6.75e-09;19!UBERON:0000344;1.00e-08;20!UBERON:0001987;6.27e-08;4!UBERON:0003729;2.57e-07;13!UBERON:0000305;3.24e-07;7!UBERON:0003343;3.52e-07;4!UBERON:0004785;3.52e-07;4!UBERON:0000065;4.70e-07;44!UBERON:0001723;6.59e-07;3!UBERON:0001033;6.59e-07;3!UBERON:0002294;7.37e-07;7!UBERON:0001173;7.37e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,9.30e-19,74;UBERON:0004119,1.30e-18,160;UBERON:0000925,1.30e-18,160;UBERON:0006595,1.30e-18,160;UBERON:0005631,2.71e-17,14;UBERON:0000158,2.71e-17,14;UBERON:0000065,1.21e-14,54;UBERON:0000161,5.91e-13,36;UBERON:0001007,1.69e-12,145;UBERON:0001555,1.69e-12,145;UBERON:0007026,1.69e-12,145;UBERON:0003124,4.43e-12,7;UBERON:0005178,9.22e-12,34;UBERON:0002224,9.22e-12,34;UBERON:0005181,2.74e-11,35;UBERON:0000166,5.91e-11,22;UBERON:0005795,8.49e-11,22;UBERON:0000153,8.90e-11,62;UBERON:0007811,8.90e-11,62;UBERON:0003975,1.50e-10,22;UBERON:0000478,1.78e-10,24;UBERON:0002048,4.16e-10,22;UBERON:0000117,4.16e-10,22;UBERON:0000171,4.16e-10,22;UBERON:0000170,4.16e-10,22;UBERON:0005597,4.16e-10,22;UBERON:0000118,4.16e-10,22;UBERON:0004921,8.46e-10,118;UBERON:0001041,8.84e-10,87;UBERON:0005911,9.55e-10,82;UBERON:0000995,1.32e-09,21;UBERON:0000033,2.73e-09,56;UBERON:0005153,4.90e-09,37;UBERON:0004175,6.75e-09,25;UBERON:0000165,7.43e-09,29;UBERON:0000930,7.43e-09,29;UBERON:0000344,9.24e-09,20;UBERON:0008947,1.33e-08,38;UBERON:0003258,1.33e-08,38;UBERON:0004923,1.43e-08,66;UBERON:0000072,3.12e-08,47;UBERON:0004807,3.22e-08,28;UBERON:0001444,4.57e-08,49;UBERON:0005157,4.65e-08,47;UBERON:0001987,6.98e-08,4;UBERON:0004340,6.98e-08,4;UBERON:0003102,1.30e-07,99;UBERON:0000974,1.44e-07,10;UBERON:0005156,1.65e-07,59;UBERON:0000990,1.65e-07,59;UBERON:0003729,2.36e-07,13;UBERON:0003343,3.18e-07,4;UBERON:0004785,3.18e-07,4;UBERON:0000305,3.26e-07,7;UBERON:0003134,3.29e-07,37;UBERON:0000474,3.29e-07,37;UBERON:0001723,6.47e-07,3;UBERON:0001033,6.47e-07,3;UBERON:0010056,6.47e-07,3 | |||
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|short_description=p1@SCEL | |short_description=p1@SCEL | ||
}} | }} |
Latest revision as of 01:30, 18 September 2015
Short description: | p1@SCEL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCEL_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -8bp_to_ENST00000471491_5end |
EntrezGene: | SCEL |
HGNC: | 10573 |
UniProt: | F2Z2X8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.79e-28 | 42 |
epithelial cell | 5.56e-26 | 253 |
endodermal cell | 1.04e-19 | 58 |
epithelial cell of alimentary canal | 1.26e-11 | 20 |
respiratory epithelial cell | 2.73e-11 | 13 |
extraembryonic cell | 5.01e-10 | 19 |
epithelial cell of uterus | 5.70e-07 | 6 |
stromal cell of endometrium | 5.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.84e-18 | 14 |
carcinoma | 3.25e-14 | 106 |
cell type cancer | 3.61e-09 | 143 |
female reproductive endometrioid cancer | 5.70e-07 | 6 |