FFCP PHASE1:Hg19::chr5:49737078..49737134,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=133418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30465 | |||
|TSSclassifier=strong | |||
|UniProt=D6RDX7 | |||
|association_with_transcript=49bp_to_ENST00000508934_5end | |||
|cluster_id=chr5:49737078..49737134,- | |||
|description=CAGE_peak_1_at_EMB_5end | |||
|id=chr5:49737078..49737134,- | |||
|ontology_enrichment_celltype=CL:0000037!4.08e-45!172;CL:0000566!4.08e-45!172;CL:0000738!4.71e-42!140;CL:0002032!1.27e-41!165;CL:0000837!1.27e-41!165;CL:0000988!2.49e-41!182;CL:0002087!2.42e-39!119;CL:0002031!4.30e-33!124;CL:0000542!5.70e-23!53;CL:0000051!5.70e-23!53;CL:0000838!1.50e-22!52;CL:0000763!7.72e-19!112;CL:0000049!7.72e-19!112;CL:0000766!1.36e-16!76;CL:0002194!4.28e-15!63;CL:0000576!4.28e-15!63;CL:0000040!4.28e-15!63;CL:0000559!4.28e-15!63;CL:0002009!2.63e-14!65;CL:0002057!1.05e-13!42;CL:0000084!7.32e-13!25;CL:0000827!7.32e-13!25;CL:0000557!9.05e-13!71;CL:0000839!1.14e-12!70;CL:0000791!5.33e-12!18;CL:0000789!5.33e-12!18;CL:0002420!5.33e-12!18;CL:0002419!5.33e-12!18;CL:0000790!5.33e-12!18;CL:0000860!3.75e-11!45;CL:0000945!2.87e-09!24;CL:0000826!2.87e-09!24;CL:0000236!1.38e-08!14;CL:0000625!1.67e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;3.66e-14;53!CL:0000860;1.84e-13;33!CL:0002057;1.84e-13;33!CL:0000084;4.17e-13;25!CL:0002087;1.49e-12;104!CL:0000791;1.49e-12;18!CL:0000789;1.49e-12;18!CL:0002419;1.49e-12;18!CL:0000576;1.45e-11;48!CL:0000473;4.51e-11;39!CL:0000234;4.51e-11;39!CL:0000738;4.78e-10;136!CL:0000945;1.55e-09;24!CL:0000625;6.91e-09;11!CL:0000236;8.68e-09;13!CL:0000988;9.51e-09;177!CL:0000766;6.19e-08;69!CL:0000763;8.68e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.35e-50,168;CL:0000988,3.87e-47,177;CL:0000738,8.78e-47,136;CL:0002032,1.34e-46,161;CL:0000837,1.34e-46,161;CL:0002087,8.09e-45,115;CL:0002031,3.92e-37,120;CL:0000542,1.40e-23,53;CL:0000051,1.40e-23,53;CL:0000838,3.86e-23,52;CL:0000763,2.76e-22,108;CL:0000049,2.76e-22,108;CL:0000766,1.01e-19,72;CL:0002194,4.97e-19,59;CL:0000576,4.97e-19,59;CL:0000040,4.97e-19,59;CL:0000559,4.97e-19,59;CL:0002009,3.74e-18,61;CL:0000557,1.68e-15,67;CL:0000839,2.77e-15,66;CL:0000860,7.16e-14,42;CL:0002057,7.16e-14,42;CL:0000473,2.44e-13,48;CL:0000234,2.44e-13,48;CL:0000084,3.94e-13,25;CL:0000827,3.94e-13,25;CL:0000791,1.44e-12,18;CL:0000789,1.44e-12,18;CL:0002420,1.44e-12,18;CL:0002419,1.44e-12,18;CL:0000790,1.44e-12,18;CL:0000945,1.73e-09,24;CL:0000826,1.73e-09,24;CL:0000236,5.69e-09,14;CL:0000625,6.97e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.66e-14;53!CL:0000790;1.49e-12;18!CL:0002057;1.26e-10;42!CL:0000049;3.30e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!6.37e-09!51;DOID:0060083!6.37e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.57e-09,51;DOID:0060083,1.57e-09,51;DOID:1240,7.78e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.59e-19!102;UBERON:0003061!2.59e-19!102;UBERON:0002193!4.19e-15!112;UBERON:0002371!1.37e-11!80;UBERON:0001474!7.10e-10!86;UBERON:0000178!1.66e-08!15;UBERON:0000179!1.66e-08!15;UBERON:0000463!1.66e-08!15;UBERON:0004765!5.67e-07!101;UBERON:0001434!5.67e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.06e-09;15!UBERON:0000179;7.06e-09;15!UBERON:0000463;7.06e-09;15!UBERON:0002390;5.05e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.12e-22,98;UBERON:0003061,2.12e-22,98;UBERON:0002193,2.32e-18,108;UBERON:0002371,7.03e-14,76;UBERON:0002405,3.40e-12,93;UBERON:0001474,1.74e-11,82;UBERON:0004765,2.77e-10,90;UBERON:0000178,6.93e-09,15;UBERON:0000179,6.93e-09,15;UBERON:0000463,6.93e-09,15;UBERON:0001434,4.88e-07,100 | |||
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| |||
|short_description=p1@EMB | |||
}} |
Latest revision as of 01:36, 18 September 2015
Short description: | p1@EMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EMB_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000508934_5end |
EntrezGene: | EMB |
HGNC: | 30465 |
UniProt: | D6RDX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.12e-22 | 98 |
blood island | 2.12e-22 | 98 |
hemolymphoid system | 2.32e-18 | 108 |
bone marrow | 7.03e-14 | 76 |
immune system | 3.40e-12 | 93 |
bone element | 1.74e-11 | 82 |
skeletal element | 2.77e-10 | 90 |
blood | 6.93e-09 | 15 |
haemolymphatic fluid | 6.93e-09 | 15 |
organism substance | 6.93e-09 | 15 |
skeletal system | 4.88e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.57e-09 | 51 |
immune system cancer | 1.57e-09 | 51 |
leukemia | 7.78e-07 | 39 |