FFCP PHASE1:Hg19::chr7:27196196..27196210,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:27196196..27196210,- to FFCP PHASE1:Hg19::chr7:27196196..27196210,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3204 | |EntrezGene=3204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5108 | |HGNC=5108 | ||
|TSSclassifier=strong | |||
|UniProt=P31268 | |UniProt=P31268 | ||
|association_with_transcript=85bp_to_NM_006896,uc003sys.2_5end | |||
|cluster_id=chr7:27196196..27196210,- | |||
|description=CAGE_peak_5_at_HOXA7_5end | |||
|id=chr7:27196196..27196210,- | |||
|ontology_enrichment_celltype=CL:0000499!1.01e-07!27;CL:1000507!1.32e-07!12;CL:1000494!1.32e-07!12;CL:1000497!1.60e-07!18;CL:0002518!1.60e-07!18;CL:0000153!4.81e-07!9;CL:0000447!4.81e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002564;5.57e-12;3!CL:0000138;9.31e-10;6!CL:1000507;2.08e-09;10!CL:1000494;2.08e-09;10!CL:0000650;3.22e-09;2!CL:1000500;3.22e-09;2!CL:1000618;3.22e-09;2!CL:1001318;3.22e-09;2!CL:0002173;3.22e-09;2!CL:0002602;5.66e-09;2!CL:1000449;1.26e-08;15!CL:0002681;1.09e-07;12!CL:0002584;1.09e-07;12!CL:1000497;1.58e-07;17!CL:0002518;1.58e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,8.73e-12,3;CL:0000058,7.86e-10,6;CL:0000138,7.86e-10,6;CL:1000507,1.71e-09,10;CL:1000494,1.71e-09,10;CL:0000650,3.24e-09,2;CL:1000500,3.24e-09,2;CL:1000618,3.24e-09,2;CL:1001318,3.24e-09,2;CL:0002173,3.24e-09,2;CL:0002602,5.80e-09,2;CL:1000449,1.02e-08,15;CL:0002681,8.88e-08,12;CL:0002584,8.88e-08,12;CL:1000497,1.33e-07,17;CL:0002518,1.33e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!1.33e-13!44;UBERON:0001008!4.49e-13!45;UBERON:0003064!1.62e-10!37;UBERON:0000489!2.07e-10!32;UBERON:0002113!2.61e-08!27;UBERON:0003918!2.61e-08!27;UBERON:0005095!2.61e-08!27;UBERON:0007687!2.61e-08!27;UBERON:0009773!1.32e-07!12;UBERON:0001231!1.32e-07!12;UBERON:0004810!1.32e-07!12;UBERON:0006555!3.93e-07!17;UBERON:0005103!3.93e-07!17;UBERON:0000083!3.93e-07!17;UBERON:0009201!3.93e-07!17;UBERON:0004819!3.93e-07!17;UBERON:0006553!3.93e-07!17;UBERON:0003074!3.93e-07!17;UBERON:0003060!3.93e-07!17;UBERON:0004876!8.63e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;3.18e-19;5!UBERON:0002216;3.18e-19;5!UBERON:0011134;3.18e-19;5!UBERON:0002209;3.18e-19;5!UBERON:0002213;3.18e-19;5!UBERON:0007844;3.18e-19;5!UBERON:0011138;3.18e-19;5!UBERON:0001130;3.18e-19;5!UBERON:0001066;3.18e-19;5!UBERON:0001468;3.18e-19;5!UBERON:0002418;4.21e-12;3!UBERON:0004755;4.21e-12;3!UBERON:0002242;5.57e-12;3!UBERON:0004905;6.87e-12;8!UBERON:0000982;6.87e-12;8!UBERON:0004770;6.87e-12;8!UBERON:0000489;4.84e-11;29!UBERON:0004211;2.08e-09;10!UBERON:0009773;2.08e-09;10!UBERON:0001231;2.08e-09;10!UBERON:0004810;2.08e-09;10!UBERON:0003567;3.22e-09;2!UBERON:0003838;3.22e-09;2!UBERON:0003586;3.22e-09;2!UBERON:0005169;3.22e-09;2!UBERON:0002321;3.22e-09;2!UBERON:0005215;3.22e-09;2!UBERON:0002303;3.22e-09;2!UBERON:0002319;3.22e-09;2!UBERON:0006444;5.66e-09;2!UBERON:0001995;5.66e-09;2!UBERON:0004715;5.66e-09;2!UBERON:0002113;8.18e-09;24!UBERON:0011143;8.18e-09;24!UBERON:0006555;1.26e-08;15!UBERON:0004819;1.26e-08;15!UBERON:0001285;1.26e-08;15!UBERON:0007684;1.26e-08;15!UBERON:0006554;1.66e-08;30!UBERON:0001008;1.66e-08;30!UBERON:0004765;4.76e-08;26!UBERON:0001225;1.09e-07;12!UBERON:0008987;1.09e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,5.12e-19,5;UBERON:0002216,5.12e-19,5;UBERON:0011134,5.12e-19,5;UBERON:0002209,5.12e-19,5;UBERON:0002213,5.12e-19,5;UBERON:0005856,5.12e-19,5;UBERON:0005866,5.12e-19,5;UBERON:0005863,5.12e-19,5;UBERON:0007844,5.12e-19,5;UBERON:0011138,5.12e-19,5;UBERON:0001130,5.12e-19,5;UBERON:0001066,5.12e-19,5;UBERON:0001468,5.12e-19,5;UBERON:0000489,2.84e-12,31;UBERON:0002418,3.72e-12,3;UBERON:0004755,3.72e-12,3;UBERON:0002242,8.73e-12,3;UBERON:0003068,8.73e-12,3;UBERON:0002328,8.73e-12,3;UBERON:0004880,8.73e-12,3;UBERON:0004905,9.17e-12,8;UBERON:0000982,9.17e-12,8;UBERON:0004770,9.17e-12,8;UBERON:0006555,1.08e-10,16;UBERON:0004819,1.08e-10,16;UBERON:0002113,4.57e-10,26;UBERON:0003918,4.57e-10,26;UBERON:0011143,4.57e-10,26;UBERON:0005095,4.57e-10,26;UBERON:0007687,4.57e-10,26;UBERON:0004810,1.71e-09,10;UBERON:0003567,3.24e-09,2;UBERON:0003838,3.24e-09,2;UBERON:0003586,3.24e-09,2;UBERON:0005169,3.24e-09,2;UBERON:0002321,3.24e-09,2;UBERON:0005215,3.24e-09,2;UBERON:0002303,3.24e-09,2;UBERON:0002319,3.24e-09,2;UBERON:0006444,5.80e-09,2;UBERON:0001995,5.80e-09,2;UBERON:0004715,5.80e-09,2;UBERON:0004211,1.02e-08,15;UBERON:0009773,1.02e-08,15;UBERON:0001231,1.02e-08,15;UBERON:0001285,1.02e-08,15;UBERON:0007684,1.02e-08,15;UBERON:0004208,1.02e-08,15;UBERON:0004876,1.83e-08,11;UBERON:0005103,7.59e-08,8;UBERON:0000083,7.59e-08,8;UBERON:0009201,7.59e-08,8;UBERON:0006553,7.59e-08,8;UBERON:0003074,7.59e-08,8;UBERON:0003060,7.59e-08,8;UBERON:0001225,8.88e-08,12;UBERON:0008987,8.88e-08,12;UBERON:0000080,5.69e-07,9;UBERON:0002120,5.69e-07,9;UBERON:0004875,5.69e-07,9;UBERON:0005721,5.69e-07,9;UBERON:0005754,5.69e-07,9;UBERON:0007297,5.69e-07,9 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,2.00146596706261,0,0,0,1.26343974685366,0,0.245733936501509,0,0,0,3.34169152992126,4.97096063591874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0.434539556882471,2.3858578411533,1.45990461090791,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.357198913136319,0.44905874525234,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.412210116953756,0.515281080091258,0,0.337552664482532,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0.517086863031111,0,0,1.06375246633948,1.04007436911366,2.31486636835928,0,2.39779961114489,0,0,0.823240336780769,0,0,1.58390374586686,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0,4.17151071845076,1.00034104211935,2.71265023699736,0,0,0,0,3.91229929646035,0,1.03473071292505,1.32845119707087,0.737476674166813,0.0868836144680828,0,0,0,0,0,0,0,0,0.992431231275107,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.821271560138091,0,0.232420756919918,0.604297247958111,0.200506470303285,0.276242966807689,0.229628896329213,0.546273504020151,0.524497659837696,1.80479845162965,0.616122696835318,6.27479815341484,0,0.633309773357254,0,0.170093705276516,2.59099099322567,0,11.6506968143857,7.02365683396795,0.254876273045038,0,1.34324852833307,0,0,0,0,0,0.103041011647722,0.54941678891006,0.495056999523528,0,0,0,1.25671933779759,0,0,0.137836572484531,0.429680979473094,0.145016693914229,0.767039646744908,0.712256285173899,0,0,0,0,0,0,0,1.23213432070436,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0.539617372749944,0.54907405947211,0.824686816419805,0,0,0,0,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0.196498082026242,0,0,0.844430541190656,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0.159426272728822,1.99579371432817,1.1490322207942,2.54008299268659,0,2.52717460302113,0,0,0,0.50787533340481,0.321176150207399,0.403599414382095,1.70338495076131,5.15258017133647,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0.852408440419239,0,0.593929361665277,0,0,0,0,0.329607748453519,0,0,0.552567831062295,0,0.511343412510774,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0.173624994933292,0,0,0,0,0,0,0,0.41827123283581,0.307801034015188,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,1.63232808159148,0.282706142867882,0,0,0.265372693510018,0,0,0.123563938946503,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,5.97680046662565,0,1.38847790668105,1.66587075604442,0.69647365264322,1.04836000945218,1.20390222730132,0.0967563312890851,0.219267951258557,0.246346371159628,0.0969890164884194,1.5003541537555,0,0,0,0,0,0,0,0,0,0,1.71594997861965,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.798716001995964,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,1.41850273138557,2.30800187793992,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.851940108927109,0.79318464064088,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,1.91502377331055,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0.434674820589684,0,0,0,0,0,2.81000943484129,0.724605143054126,0.298509605773748,0.233713309847224,0,0.378806010550178,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0.862598491173454,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0.115525666150338,0,0,0.994581110581374,0.82731361184183,0,0,0,0,0,0,0,0.206686796501184,0,0,0,1.98484471355718,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0.913158720509496,0.215927591218621,0.9555033757741,0,0,0.116241425368125,0.347716544605159,0,0,0,0,0,1.06498800657509,1.95990830946063,0,0.22910686854405,0,0,0,0,0,0.647428837187895,1.02662806856247,2.3196288626764,2.4285549652957,0.233939463462106,1.59160620129095,0.237840181555137,0,0,0,0.0771741581079447,0,6.1141248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| ||
|short_description=p5@HOXA7 | |||
}} | }} |
Latest revision as of 01:37, 18 September 2015
Short description: | p5@HOXA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HOXA7_5end |
Coexpression cluster: | NA |
Association with transcript: | 85bp_to_NM_006896, uc003sys.2_5end |
EntrezGene: | HOXA7 |
HGNC: | 5108 |
UniProt: | P31268 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 8.73e-12 | 3 |
chondroblast | 7.86e-10 | 6 |
chondrocyte | 7.86e-10 | 6 |
kidney tubule cell | 1.71e-09 | 10 |
nephron tubule epithelial cell | 1.71e-09 | 10 |
mesangial cell | 3.24e-09 | 2 |
kidney interstitial cell | 3.24e-09 | 2 |
juxtaglomerular complex cell | 3.24e-09 | 2 |
renal interstitial pericyte | 3.24e-09 | 2 |
extraglomerular mesangial cell | 3.24e-09 | 2 |
annulus pulposus cell | 5.80e-09 | 2 |
epithelial cell of nephron | 1.02e-08 | 15 |
kidney cortical cell | 8.88e-08 | 12 |
renal cortical epithelial cell | 8.88e-08 | 12 |
kidney cell | 1.33e-07 | 17 |
kidney epithelial cell | 1.33e-07 | 17 |