FFCP PHASE1:Hg19::chr6:32411178..32411194,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3117 | |EntrezGene=3117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4942 | |HGNC=4942 | ||
|TSSclassifier=strong | |||
|UniProt=Q7YPT8 | |UniProt=Q7YPT8 | ||
|association_with_transcript=217bp_to_AF522250_5end | |association_with_transcript=217bp_to_AF522250_5end | ||
|cluster_id=chr6:32411178..32411194,+ | |||
|coexpression_cluster_id=C187 | |coexpression_cluster_id=C187 | ||
|description=CAGE_peak_6_at_HLA-DQA1_5end | |description=CAGE_peak_6_at_HLA-DQA1_5end | ||
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|ontology_enrichment_celltype=CL:0000738!6.95e-58!140;CL:0002087!1.39e-57!119;CL:0000037!5.84e-55!172;CL:0000566!5.84e-55!172;CL:0002009!1.21e-54!65;CL:0002031!2.54e-53!124;CL:0002032!5.52e-53!165;CL:0000837!5.52e-53!165;CL:0002194!6.56e-52!63;CL:0000576!6.56e-52!63;CL:0000040!6.56e-52!63;CL:0000559!6.56e-52!63;CL:0002057!1.76e-51!42;CL:0000988!3.70e-51!182;CL:0000557!2.99e-48!71;CL:0000860!6.60e-47!45;CL:0000839!1.06e-44!70;CL:0000766!4.28e-43!76;CL:0000763!2.62e-42!112;CL:0000049!2.62e-42!112;CL:0000945!9.41e-22!24;CL:0000826!9.41e-22!24;CL:0000236!2.36e-14!14;CL:0000990!6.51e-13!8;CL:0000451!2.25e-12!10;CL:0002393!2.58e-11!9;CL:0002397!2.58e-11!9;CL:0000134!9.01e-11!358;CL:0002320!4.68e-10!365;CL:0000542!7.87e-10!53;CL:0000051!7.87e-10!53;CL:0000838!2.30e-09!52;CL:0000840!4.94e-09!5;CL:0001029!4.94e-09!5;CL:0000453!3.37e-08!5;CL:0000219!1.27e-07!390 | |ontology_enrichment_celltype=CL:0000738!6.95e-58!140;CL:0002087!1.39e-57!119;CL:0000037!5.84e-55!172;CL:0000566!5.84e-55!172;CL:0002009!1.21e-54!65;CL:0002031!2.54e-53!124;CL:0002032!5.52e-53!165;CL:0000837!5.52e-53!165;CL:0002194!6.56e-52!63;CL:0000576!6.56e-52!63;CL:0000040!6.56e-52!63;CL:0000559!6.56e-52!63;CL:0002057!1.76e-51!42;CL:0000988!3.70e-51!182;CL:0000557!2.99e-48!71;CL:0000860!6.60e-47!45;CL:0000839!1.06e-44!70;CL:0000766!4.28e-43!76;CL:0000763!2.62e-42!112;CL:0000049!2.62e-42!112;CL:0000945!9.41e-22!24;CL:0000826!9.41e-22!24;CL:0000236!2.36e-14!14;CL:0000990!6.51e-13!8;CL:0000451!2.25e-12!10;CL:0002393!2.58e-11!9;CL:0002397!2.58e-11!9;CL:0000134!9.01e-11!358;CL:0002320!4.68e-10!365;CL:0000542!7.87e-10!53;CL:0000051!7.87e-10!53;CL:0000838!2.30e-09!52;CL:0000840!4.94e-09!5;CL:0001029!4.94e-09!5;CL:0000453!3.37e-08!5;CL:0000219!1.27e-07!390 | ||
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|ontology_enrichment_development_v019=CL:0002057;2.79e-71;42!CL:0000049;8.32e-20;108 | |ontology_enrichment_development_v019=CL:0002057;2.79e-71;42!CL:0000049;8.32e-20;108 | ||
|ontology_enrichment_disease=DOID:0060058!1.88e-07!10 | |ontology_enrichment_disease=DOID:0060058!1.88e-07!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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|short_description=p6@HLA-DQA1 | |short_description=p6@HLA-DQA1 | ||
}} | }} |
Latest revision as of 02:57, 18 September 2015
Short description: | p6@HLA-DQA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HLA-DQA1_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 217bp_to_AF522250_5end |
EntrezGene: | HLA-DQA1 |
HGNC: | 4942 |
UniProt: | Q7YPT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-84 | 76 |
bone element | 1.62e-77 | 82 |
skeletal element | 1.76e-69 | 90 |
immune system | 8.03e-67 | 93 |
hematopoietic system | 2.37e-65 | 98 |
blood island | 2.37e-65 | 98 |
skeletal system | 3.13e-61 | 100 |
hemolymphoid system | 4.53e-58 | 108 |
musculoskeletal system | 2.47e-31 | 167 |
lateral plate mesoderm | 8.29e-26 | 203 |
connective tissue | 1.76e-21 | 371 |
mesoderm | 6.99e-12 | 315 |
mesoderm-derived structure | 6.99e-12 | 315 |
presumptive mesoderm | 6.99e-12 | 315 |