FFCP PHASE1:Hg19::chr8:38243721..38243743,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:38243721..38243743,+ to FFCP PHASE1:Hg19::chr8:38243721..38243743,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=137994 | |EntrezGene=137994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14648 | |HGNC=14648 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIC7 | |UniProt=E9PIC7 | ||
|association_with_transcript=0bp_to_ENST00000527334_5end | |||
|cluster_id=chr8:38243721..38243743,+ | |||
|description=CAGE_peak_7_at_LETM2_5end | |||
|id=chr8:38243721..38243743,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;8.14e-24;6!CL:0000791;1.25e-16;18!CL:0000789;1.25e-16;18!CL:0002419;1.25e-16;18!CL:0000097;1.57e-14;5!CL:0000623;4.89e-13;3!CL:0000898;1.20e-12;3!CL:0000084;1.62e-11;25!CL:0000542;5.22e-09;53!CL:0000815;9.69e-09;2!CL:0000792;9.69e-09;2!CL:0002677;9.69e-09;2!CL:0000163;4.52e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.75e-24,6;CL:0000791,1.05e-16,18;CL:0000789,1.05e-16,18;CL:0002420,1.05e-16,18;CL:0002419,1.05e-16,18;CL:0000790,1.05e-16,18;CL:0000097,1.53e-14,5;CL:0002028,1.53e-14,5;CL:0000838,2.26e-14,52;CL:0000542,4.90e-14,53;CL:0000051,4.90e-14,53;CL:0000623,4.52e-13,3;CL:0000825,4.52e-13,3;CL:0000898,1.30e-12,3;CL:0000084,1.43e-11,25;CL:0000827,1.43e-11,25;CL:0000738,1.45e-11,136;CL:0002031,3.44e-11,120;CL:0002032,6.75e-11,161;CL:0000837,6.75e-11,161;CL:0000037,3.38e-10,168;CL:0000988,2.21e-09,177;CL:0000815,9.71e-09,2;CL:0000792,9.71e-09,2;CL:0002677,9.71e-09,2;CL:0000163,4.45e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000790;1.25e-16;18!CL:0000051;5.22e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.76e-10!86;UBERON:0000073!8.62e-10!94;UBERON:0001016!8.62e-10!94;UBERON:0001017!2.28e-08!82;UBERON:0000955!3.20e-08!69;UBERON:0006238!3.20e-08!69;UBERON:0002780!1.21e-07!41;UBERON:0001890!1.21e-07!41;UBERON:0006240!1.21e-07!41;UBERON:0003080!2.92e-07!42;UBERON:0001049!6.22e-07!57;UBERON:0005068!6.22e-07!57;UBERON:0006241!6.22e-07!57;UBERON:0007135!6.22e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.90e-10;4!UBERON:0010133;2.90e-10;4!UBERON:0002784;2.90e-10;4!UBERON:0001905;4.84e-10;2!UBERON:0002757;4.84e-10;2!UBERON:0010134;4.84e-10;2!UBERON:0005408;4.84e-10;2!UBERON:0001899;4.84e-10;2!UBERON:0001894;9.10e-10;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,2.49e-10,4;UBERON:0003296,3.96e-10,4;UBERON:0010133,3.96e-10,4;UBERON:0001905,4.85e-10,2;UBERON:0002757,4.85e-10,2;UBERON:0010134,4.85e-10,2;UBERON:0005408,4.85e-10,2;UBERON:0001899,4.85e-10,2;UBERON:0001894,1.02e-09,7;UBERON:0006222,1.02e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,1.96682138424452,0.383829398097213,1.85779347979291,0,0,0,0.0774672005803016,0,0.880801318004542,0,1.20326668482085,0.651032612147555,0,0,0,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0.929119112685311,0,0,0,0,0.645484683583826,1.35426486594342,0.564727018627814,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0.632924774881769,0,0.212604299965044,0.419317291016752,0,0.150176892841506,0,0,0.59675003159727,0.730656615058536,0,0,0,0,0,0,0,0,5.12291672198504,6.45960908308033,4.58727873750275,0,0,0.526768169550154,2.360517241366,1.96505381374582,3.90642848099067,0,1.95553359980154,3.31413464014313,1.94826728407911,0,1.17842362989935,0.886135578334485,1.35401931882508,0,0.130059347559878,0,0.276350017785848,0,4.74517002118593,4.81573490561484,2.09071047609954,0,3.44898444241729,5.84166657320471,3.54227568827304,0,0,0,0.150575119077773,0,0,0,0,1.41124720257313,2.13952156626806,2.02754165435919,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0.112611480483322,0,0,0,0,3.87780264148325,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0.311211035399766,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.600182192168805,0,0,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,5.91195885475132,0.352193736052904,10.1590776614978,8.2148373447668,15.9065466117239,0.317489471460845,0,0,0,0.205654985406647,0.600686115687835,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,1.57624608161542,3.45004119775228,3.46526197955321,0,0,0.773288812777695,1.34013012267479,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.862856803274467,0.533637789017222,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,0.784306353074702,0.256450125116389,0.328014645699706,2.27764876265012,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.606547444719948,1.58510321173008,0,0.48763373908959,0,0,0,0,0,0,0,1.75380354101505,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.0711418433484141,0,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.293016358543788,0.121360521749513,0,0,0.23874448473769,0,0.921482106297696,1.9882952955326,0.281338832821026,0,0,0,0,0,0,0.511343412510774,0,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0.174919999992391,0,0,0,0,0.344743373241465,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0.658156191461918,0,0.41827123283581,0,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0.31396051279005,0,0.225595660617181,0.19606253431774,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0.91227394607833,0,0,0,0,0.30607276163049,0.189559738885464,2.25485129121739,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0.522355239482415,0.17472666824203,1.0319161948297,0,0.0730893170861856,0,0.0969890164884194,0.176512253383001,0.225980740780532,0.137041924646751,0,0.379864775735272,0.586654148204409,0.160317640503067,0.426905989478705,0,0,0,0.171594997861965,0,0,0,1.22313785466253,0.732219924186332,0.305994652908965,0.288950589901519,0.600420288709789,0.136905378891993,1.27746588066972,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.899895566206002,0.77380195455795,0.728994679896296,0.670869375198532,0.315222829196793,0.314727528809989,0.105600336519406,0,0,0,0,0,1.08599920350743,0,0,0,0.492555124496034,0,0,0,0,0.129282956361551,0.39669780522807,0.171086837884329,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0,0.327872630709804,0.157054096250234,0,0.976210119215705,0.1251909307065,0,0.332787154610557,0.124192805882767,0.415045904808692,0,0.151649117541648,0,0.705797459094515,0.468334905806882,0,0.149254802886874,0,0,0.568209015825267,1.50940741051545,0,0,0,0,0.295710299979268,0,0,0.310525913752519,0,0.265841714557995,0.521745061811734,0.150257608997218,0.380805212168795,1.22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| ||
|short_description=p7@LETM2 | |||
}} | }} |
Latest revision as of 03:28, 18 September 2015
Short description: | p7@LETM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LETM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000527334_5end |
EntrezGene: | LETM2 |
HGNC: | 14648 |
UniProt: | E9PIC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.75e-24 | 6 |
mature alpha-beta T cell | 1.05e-16 | 18 |
alpha-beta T cell | 1.05e-16 | 18 |
immature T cell | 1.05e-16 | 18 |
mature T cell | 1.05e-16 | 18 |
immature alpha-beta T cell | 1.05e-16 | 18 |
mast cell | 1.53e-14 | 5 |
basophil mast progenitor cell | 1.53e-14 | 5 |
lymphoid lineage restricted progenitor cell | 2.26e-14 | 52 |
lymphocyte | 4.90e-14 | 53 |
common lymphoid progenitor | 4.90e-14 | 53 |
natural killer cell | 4.52e-13 | 3 |
pro-NK cell | 4.52e-13 | 3 |
naive T cell | 1.30e-12 | 3 |
T cell | 1.43e-11 | 25 |
pro-T cell | 1.43e-11 | 25 |
leukocyte | 1.45e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 3.44e-11 | 120 |
hematopoietic oligopotent progenitor cell | 6.75e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.75e-11 | 161 |
hematopoietic stem cell | 3.38e-10 | 168 |
hematopoietic cell | 2.21e-09 | 177 |
regulatory T cell | 9.71e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.71e-09 | 2 |
naive regulatory T cell | 9.71e-09 | 2 |
endocrine cell | 4.45e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 2.49e-10 | 4 |
gland of diencephalon | 3.96e-10 | 4 |
neuroendocrine gland | 3.96e-10 | 4 |
pineal body | 4.85e-10 | 2 |
regional part of epithalamus | 4.85e-10 | 2 |
secretory circumventricular organ | 4.85e-10 | 2 |
circumventricular organ | 4.85e-10 | 2 |
epithalamus | 4.85e-10 | 2 |
diencephalon | 1.02e-09 | 7 |
future diencephalon | 1.02e-09 | 7 |