FFCP PHASE1:Hg19::chr21:34697258..34697336,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3454 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5432 | |||
|TSSclassifier=strong | |||
|UniProt=C9J114,C9JV08 | |||
|association_with_transcript=0bp_to_ENST00000442071,ENST00000442357_5end | |||
|cluster_id=chr21:34697258..34697336,+ | |||
|coexpression_cluster_id=C509 | |||
|description=CAGE_peak_1_at_IFNAR1_5end | |||
|id=chr21:34697258..34697336,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.27e-27!76;CL:0000738!2.07e-25!140;CL:0002194!3.51e-25!63;CL:0000576!3.51e-25!63;CL:0000040!3.51e-25!63;CL:0000559!3.51e-25!63;CL:0002009!1.01e-24!65;CL:0002057!1.12e-22!42;CL:0000557!1.31e-22!71;CL:0000839!2.84e-22!70;CL:0000860!2.81e-21!45;CL:0002087!6.86e-21!119;CL:0002031!2.44e-19!124;CL:0000037!6.93e-15!172;CL:0000566!6.93e-15!172;CL:0002032!1.87e-14!165;CL:0000837!1.87e-14!165;CL:0000763!6.99e-14!112;CL:0000049!6.99e-14!112;CL:0000988!7.24e-13!182;CL:0000134!8.36e-12!358;CL:0002320!1.47e-10!365;CL:0000219!9.39e-08!390;CL:0000048!9.20e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.44e-18;39!CL:0000234;5.44e-18;39!CL:0000860;1.10e-17;33!CL:0002057;1.10e-17;33!CL:0000576;2.33e-15;48!CL:0000766;5.74e-12;69!CL:0000738;8.02e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.84e-29,72;CL:0002194,9.11e-27,59;CL:0000576,9.11e-27,59;CL:0000040,9.11e-27,59;CL:0000559,9.11e-27,59;CL:0000473,1.67e-26,48;CL:0000234,1.67e-26,48;CL:0002009,3.16e-26,61;CL:0000738,4.50e-26,136;CL:0000557,7.39e-24,67;CL:0000839,1.60e-23,66;CL:0000860,1.12e-22,42;CL:0002057,1.12e-22,42;CL:0002087,1.51e-21,115;CL:0002031,6.40e-20,120;CL:0000037,3.41e-15,168;CL:0002032,9.09e-15,161;CL:0000837,9.09e-15,161;CL:0000763,2.40e-14,108;CL:0000049,2.40e-14,108;CL:0000988,1.70e-13,177;CL:0000134,4.02e-12,354;CL:0002320,7.49e-11,361;CL:0000219,5.52e-08,386;CL:0000048,7.97e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.69e-25!102;UBERON:0003061!2.69e-25!102;UBERON:0002193!2.51e-24!112;UBERON:0002371!6.37e-20!80;UBERON:0001474!6.25e-19!86;UBERON:0004765!5.35e-18!101;UBERON:0001434!5.35e-18!101;UBERON:0002405!1.20e-16!115;UBERON:0007023!3.55e-12!115;UBERON:0002384!4.34e-10!375;UBERON:0001049!2.17e-08!57;UBERON:0005068!2.17e-08!57;UBERON:0006241!2.17e-08!57;UBERON:0007135!2.17e-08!57;UBERON:0003080!5.38e-08!42;UBERON:0002780!6.72e-08!41;UBERON:0001890!6.72e-08!41;UBERON:0006240!6.72e-08!41;UBERON:0002616!1.20e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.06e-26,98;UBERON:0003061,3.06e-26,98;UBERON:0002193,3.83e-25,108;UBERON:0002371,6.91e-21,76;UBERON:0002405,1.47e-20,93;UBERON:0001474,8.89e-20,82;UBERON:0004765,2.43e-18,90;UBERON:0001434,2.03e-17,100;UBERON:0007023,6.80e-12,114;UBERON:0002384,2.28e-10,371;UBERON:0001049,2.75e-08,56;UBERON:0005068,2.75e-08,56;UBERON:0006241,2.75e-08,56;UBERON:0007135,2.75e-08,56;UBERON:0002780,6.72e-08,41;UBERON:0001890,6.72e-08,41;UBERON:0003080,6.72e-08,41;UBERON:0006240,6.72e-08,41;UBERON:0000073,1.67e-07,53;UBERON:0002616,1.67e-07,53 | |||
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| |||
|short_description=p1@IFNAR1 | |||
}} |
Latest revision as of 04:07, 18 September 2015
Short description: | p1@IFNAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFNAR1_5end |
Coexpression cluster: | C509_Neutrophils_Eosinophils_CD14_Whole_CD34_CD19_Peripheral |
Association with transcript: | 0bp_to_ENST00000442071, ENST00000442357_5end |
EntrezGene: | IFNAR1 |
HGNC: | 5432 |
UniProt: | C9J114C9JV08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.84e-29 | 72 |
monopoietic cell | 9.11e-27 | 59 |
monocyte | 9.11e-27 | 59 |
monoblast | 9.11e-27 | 59 |
promonocyte | 9.11e-27 | 59 |
defensive cell | 1.67e-26 | 48 |
phagocyte | 1.67e-26 | 48 |
macrophage dendritic cell progenitor | 3.16e-26 | 61 |
leukocyte | 4.50e-26 | 136 |
granulocyte monocyte progenitor cell | 7.39e-24 | 67 |
myeloid lineage restricted progenitor cell | 1.60e-23 | 66 |
classical monocyte | 1.12e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-22 | 42 |
nongranular leukocyte | 1.51e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 6.40e-20 | 120 |
hematopoietic stem cell | 3.41e-15 | 168 |
hematopoietic oligopotent progenitor cell | 9.09e-15 | 161 |
hematopoietic multipotent progenitor cell | 9.09e-15 | 161 |
myeloid cell | 2.40e-14 | 108 |
common myeloid progenitor | 2.40e-14 | 108 |
hematopoietic cell | 1.70e-13 | 177 |
mesenchymal cell | 4.02e-12 | 354 |
connective tissue cell | 7.49e-11 | 361 |
motile cell | 5.52e-08 | 386 |
multi fate stem cell | 7.97e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.06e-26 | 98 |
blood island | 3.06e-26 | 98 |
hemolymphoid system | 3.83e-25 | 108 |
bone marrow | 6.91e-21 | 76 |
immune system | 1.47e-20 | 93 |
bone element | 8.89e-20 | 82 |
skeletal element | 2.43e-18 | 90 |
skeletal system | 2.03e-17 | 100 |
adult organism | 6.80e-12 | 114 |
connective tissue | 2.28e-10 | 371 |
neural tube | 2.75e-08 | 56 |
neural rod | 2.75e-08 | 56 |
future spinal cord | 2.75e-08 | 56 |
neural keel | 2.75e-08 | 56 |
regional part of forebrain | 6.72e-08 | 41 |
forebrain | 6.72e-08 | 41 |
anterior neural tube | 6.72e-08 | 41 |
future forebrain | 6.72e-08 | 41 |
regional part of nervous system | 1.67e-07 | 53 |
regional part of brain | 1.67e-07 | 53 |