FFCP PHASE1:Hg19::chr15:56657613..56657651,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374618 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29585 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N6V9,B4DH73 | |||
|association_with_transcript=0bp_to_ENST00000352903,ENST00000537232,ENST00000558127,ENST00000561221,NM_198524,uc002ado.1,uc002adp.2,uc002adq.1,uc010ugl.1_5end | |||
|cluster_id=chr15:56657613..56657651,+ | |||
|description=CAGE_peak_1_at_TEX9_5end | |||
|id=chr15:56657613..56657651,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.30e-09;29 | |||
|ontology_enrichment_disease=DOID:162!1.51e-19!235;DOID:14566!1.56e-19!239;DOID:0050687!7.96e-19!143;DOID:305!8.96e-16!106;DOID:0050686!4.01e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.05e-18,143;DOID:162,1.44e-18,235;DOID:14566,1.63e-18,239;DOID:305,1.04e-15,106;DOID:0050686,1.62e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.76e-13!173;UBERON:0006601!1.76e-13!173;UBERON:0000073!1.85e-13!94;UBERON:0001016!1.85e-13!94;UBERON:0004121!2.69e-12!169;UBERON:0005743!3.88e-12!86;UBERON:0001017!5.33e-11!82;UBERON:0002346!5.06e-09!90;UBERON:0000033!7.69e-09!123;UBERON:0000153!1.21e-08!129;UBERON:0007811!1.21e-08!129;UBERON:0001049!3.63e-08!57;UBERON:0005068!3.63e-08!57;UBERON:0006241!3.63e-08!57;UBERON:0007135!3.63e-08!57;UBERON:0007023!4.91e-08!115;UBERON:0003056!6.53e-08!61;UBERON:0003075!7.30e-08!86;UBERON:0007284!7.30e-08!86;UBERON:0000955!1.42e-07!69;UBERON:0006238!1.42e-07!69;UBERON:0001007!3.52e-07!155;UBERON:0001555!3.52e-07!155;UBERON:0007026!3.52e-07!155;UBERON:0000481!4.33e-07!347;UBERON:0003080!7.47e-07!42;UBERON:0002780!8.15e-07!41;UBERON:0001890!8.15e-07!41;UBERON:0006240!8.15e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,5.14e-15,223;UBERON:0004121,7.18e-13,171;UBERON:0000924,7.18e-13,171;UBERON:0006601,7.18e-13,171;UBERON:0001016,4.46e-12,89;UBERON:0001017,6.46e-11,81;UBERON:0002346,2.02e-08,86;UBERON:0001049,2.53e-08,56;UBERON:0005068,2.53e-08,56;UBERON:0006241,2.53e-08,56;UBERON:0007135,2.53e-08,56;UBERON:0007023,4.75e-08,114;UBERON:0010371,9.07e-08,104;UBERON:0000073,1.01e-07,53;UBERON:0002616,1.01e-07,53;UBERON:0003056,1.32e-07,61;UBERON:0000955,1.90e-07,68;UBERON:0006238,1.90e-07,68;UBERON:0003075,2.85e-07,82;UBERON:0007284,2.85e-07,82;UBERON:0002780,6.43e-07,41;UBERON:0001890,6.43e-07,41;UBERON:0003080,6.43e-07,41;UBERON:0006240,6.43e-07,41 | |||
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| |||
|short_description=p1@TEX9 | |||
}} |
Latest revision as of 05:26, 18 September 2015
Short description: | p1@TEX9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TEX9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000352903, ENST00000537232, ENST00000558127, ENST00000561221, NM_198524, uc002ado.1, uc002adp.2, uc002adq.1, uc010ugl.1_5end |
EntrezGene: | TEX9 |
HGNC: | 29585 |
UniProt: | Q8N6V9B4DH73 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 5.14e-15 | 223 |
ectoderm-derived structure | 7.18e-13 | 171 |
ectoderm | 7.18e-13 | 171 |
presumptive ectoderm | 7.18e-13 | 171 |
nervous system | 4.46e-12 | 89 |
central nervous system | 6.46e-11 | 81 |
neurectoderm | 2.02e-08 | 86 |
neural tube | 2.53e-08 | 56 |
neural rod | 2.53e-08 | 56 |
future spinal cord | 2.53e-08 | 56 |
neural keel | 2.53e-08 | 56 |
adult organism | 4.75e-08 | 114 |
ecto-epithelium | 9.07e-08 | 104 |
regional part of nervous system | 1.01e-07 | 53 |
regional part of brain | 1.01e-07 | 53 |
pre-chordal neural plate | 1.32e-07 | 61 |
brain | 1.90e-07 | 68 |
future brain | 1.90e-07 | 68 |
neural plate | 2.85e-07 | 82 |
presumptive neural plate | 2.85e-07 | 82 |
regional part of forebrain | 6.43e-07 | 41 |
forebrain | 6.43e-07 | 41 |
anterior neural tube | 6.43e-07 | 41 |
future forebrain | 6.43e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.05e-18 | 143 |
cancer | 1.44e-18 | 235 |
disease of cellular proliferation | 1.63e-18 | 239 |
carcinoma | 1.04e-15 | 106 |
organ system cancer | 1.62e-07 | 137 |