FFCP PHASE1:Hg19::chr21:37838760..37838766,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23562 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2035 | |||
|TSSclassifier=strong | |||
|UniProt=O95500 | |||
|association_with_transcript=-21bp_to_ENST00000399139_5end | |||
|cluster_id=chr21:37838760..37838766,- | |||
|description=CAGE_peak_1_at_CLDN14_5end | |||
|id=chr21:37838760..37838766,- | |||
|ontology_enrichment_celltype=CL:0000359!5.28e-17!32;CL:0002057!1.67e-16!42;CL:0000860!6.65e-15!45;CL:0000048!7.85e-13!430;CL:0000723!8.72e-13!436;CL:0000192!9.18e-13!42;CL:0000514!9.18e-13!42;CL:0000034!4.40e-12!444;CL:0002539!1.06e-10!10;CL:0002139!2.27e-10!24;CL:0002194!2.38e-10!63;CL:0000576!2.38e-10!63;CL:0000040!2.38e-10!63;CL:0000559!2.38e-10!63;CL:0000222!4.13e-10!119;CL:0002009!8.16e-10!65;CL:0002371!1.26e-09!591;CL:0000680!1.59e-09!57;CL:0000056!1.59e-09!57;CL:0000355!1.59e-09!57;CL:0000187!1.69e-09!54;CL:0000183!4.40e-09!59;CL:0000393!9.77e-09!60;CL:0000211!9.77e-09!60;CL:0000839!1.28e-08!70;CL:0005020!1.68e-08!6;CL:0002138!1.68e-08!6;CL:0005022!1.68e-08!6;CL:0000557!2.10e-08!71;CL:0000144!1.71e-07!625;CL:0000766!2.05e-07!76;CL:0002494!3.04e-07!16;CL:0000115!7.13e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.38e-24;32!CL:0002539;9.58e-20;10!CL:0000192;2.04e-13;43!CL:0000860;2.52e-10;33!CL:0002057;2.52e-10;33!CL:0002494;2.10e-09;16!CL:0000569;2.39e-08;4!CL:0002589;4.59e-08;2!CL:0000473;4.87e-08;39!CL:0000234;4.87e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.44e-25,32;CL:0002539,7.80e-20,10;CL:0000192,7.00e-18,43;CL:0000514,7.00e-18,43;CL:0000187,4.93e-13,55;CL:0000680,3.86e-12,58;CL:0000056,3.86e-12,58;CL:0000355,3.86e-12,58;CL:0000048,1.90e-11,427;CL:0000393,2.45e-11,61;CL:0000211,2.45e-11,61;CL:0000723,4.13e-11,433;CL:0000034,1.12e-10,441;CL:0002494,1.78e-09,16;CL:0000860,2.62e-09,42;CL:0002057,2.62e-09,42;CL:0000569,2.20e-08,4;CL:0000011,2.20e-08,4;CL:0002589,4.45e-08,2;CL:0000473,8.38e-08,48;CL:0000234,8.38e-08,48 | |||
|ontology_enrichment_development_v019=CL:0000514;2.04e-13;43!CL:0000011;2.39e-08;4!CL:0002057;6.35e-07;42 | |||
|ontology_enrichment_disease=DOID:2394!2.12e-15!14;DOID:120!1.78e-10!27;DOID:193!1.83e-09!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.72e-17;14!DOID:120;3.30e-12;27!DOID:193;3.36e-11;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.17e-17,14;DOID:120,3.50e-12,27;DOID:193,3.54e-11,29 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.02e-24!69;UBERON:0001637!3.09e-22!42;UBERON:0003509!3.09e-22!42;UBERON:0004572!3.09e-22!42;UBERON:0004872!3.74e-21!84;UBERON:0001981!1.20e-20!60;UBERON:0007500!1.20e-20!60;UBERON:0004537!1.20e-20!60;UBERON:0006965!1.20e-20!60;UBERON:0002049!5.06e-20!79;UBERON:0007798!5.06e-20!79;UBERON:0004535!4.40e-18!110;UBERON:0003081!2.04e-17!216;UBERON:0001009!3.08e-17!113;UBERON:0004573!2.80e-16!33;UBERON:0004571!2.80e-16!33;UBERON:0003914!3.73e-13!118;UBERON:0000992!2.50e-11!13;UBERON:0002204!2.81e-11!167;UBERON:0004237!1.06e-10!10;UBERON:0004695!1.06e-10!10;UBERON:0002111!1.06e-10!10;UBERON:0004178!1.06e-10!10;UBERON:0001134!2.55e-09!61;UBERON:0002036!2.55e-09!61;UBERON:0003082!2.55e-09!61;UBERON:0000947!3.08e-09!21;UBERON:0010191!3.08e-09!21;UBERON:0000490!6.82e-09!138;UBERON:0002385!8.20e-09!63;UBERON:0001015!8.20e-09!63;UBERON:0000383!8.20e-09!63;UBERON:0002118!1.67e-08!5;UBERON:0004532!1.67e-08!5;UBERON:0000926!3.08e-08!448;UBERON:0004120!3.08e-08!448;UBERON:0006603!3.08e-08!448;UBERON:0002119!9.24e-08!4;UBERON:0004531!9.24e-08!4;UBERON:0004290!2.73e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.77e-22;33!UBERON:0004571;2.77e-22;33!UBERON:0004237;9.58e-20;10!UBERON:0004695;9.58e-20;10!UBERON:0002111;9.58e-20;10!UBERON:0004178;9.58e-20;10!UBERON:0001637;3.93e-19;42!UBERON:0003509;3.93e-19;42!UBERON:0004572;3.93e-19;42!UBERON:0000992;1.36e-14;13!UBERON:0000947;1.45e-13;21!UBERON:0010191;1.45e-13;21!UBERON:0002119;2.26e-13;4!UBERON:0001135;1.12e-12;15!UBERON:0002118;2.21e-10;5!UBERON:0007500;5.87e-10;56!UBERON:0001981;5.87e-10;56!UBERON:0004537;5.87e-10;56!UBERON:0000991;1.69e-08;21!UBERON:0000055;1.88e-08;65!UBERON:0001529;4.59e-08;2!UBERON:0007204;4.59e-08;2!UBERON:0003134;4.33e-07;33!UBERON:0003914;4.55e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.33e-26,42;UBERON:0003509,3.33e-26,42;UBERON:0004572,3.33e-26,42;UBERON:0004573,5.51e-25,33;UBERON:0004571,5.51e-25,33;UBERON:0004237,7.80e-20,10;UBERON:0004695,7.80e-20,10;UBERON:0002111,7.80e-20,10;UBERON:0004178,7.80e-20,10;UBERON:0004872,2.73e-18,83;UBERON:0000055,2.40e-17,68;UBERON:0007500,4.12e-17,59;UBERON:0001981,4.12e-17,59;UBERON:0004537,4.12e-17,59;UBERON:0006965,4.12e-17,59;UBERON:0000926,2.50e-15,315;UBERON:0004120,2.50e-15,315;UBERON:0006603,2.50e-15,315;UBERON:0004535,9.35e-15,109;UBERON:0000992,1.52e-14,13;UBERON:0002049,2.16e-14,78;UBERON:0007798,2.16e-14,78;UBERON:0001009,3.56e-14,112;UBERON:0003081,4.61e-14,203;UBERON:0000947,1.28e-13,21;UBERON:0010191,1.28e-13,21;UBERON:0002119,1.96e-13,4;UBERON:0001135,9.78e-13,15;UBERON:0003914,3.52e-12,117;UBERON:0001134,4.36e-11,62;UBERON:0002036,4.36e-11,62;UBERON:0003082,4.36e-11,62;UBERON:0002385,1.30e-10,64;UBERON:0001015,1.30e-10,64;UBERON:0000383,1.30e-10,64;UBERON:0002118,2.83e-10,5;UBERON:0002204,3.60e-10,167;UBERON:0002329,3.66e-09,71;UBERON:0003059,3.66e-09,71;UBERON:0007282,3.66e-09,71;UBERON:0004290,3.66e-09,71;UBERON:0009618,3.66e-09,71;UBERON:0003077,5.57e-09,72;UBERON:0007285,5.57e-09,72;UBERON:0007524,8.39e-09,73;UBERON:0000991,1.80e-08,21;UBERON:0009196,1.80e-08,21;UBERON:0009117,1.80e-08,21;UBERON:0005564,1.80e-08,21;UBERON:0001529,4.45e-08,2;UBERON:0007204,4.45e-08,2;UBERON:0004176,5.05e-08,22;UBERON:0007503,5.51e-08,78;UBERON:0000486,2.85e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,4.82155622419182,2.19093027116212,9.27072317701963,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,1.66198622559563,0,0.434021741431704,0,0,0,0.290796477559129,0.755751887377619,0,0,1.23350366406548,1.23882548358041,0,1.5369642391746,0.709446689665756,2.06847408441971,6.45484683583826,2.70852973188684,0.188242339542605,0.545812300115692,0,1.53041946185451,2.88836124368484,0.639337125799041,0,0.199463657621632,0,1.7412554317715,1.13477044938228,1.24564449799115,0,2.60741459210101,0.868755378820466,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,3.13492449805216,1.03366703667732,0.71153252537342,1.33888245105868,0,0,0.488124115096339,0,3.24056779152704,0.357198913136319,0.44905874525234,0.112611480483322,0,0.949265659568129,0,0,0,0,2.98183171017191,2.78587125662075,0.132409180813219,0,0,0,18.1473292740498,1.72667283892012,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,1.60853921143608,0,1.07946785661859,0.710246901252508,0.164254312027618,1.55776328755086,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445160178233687,0,0,0,0,0,0,2.7881490806424,4.62050370264133,2.66153015158511,1.73986598415015,10.5634804889234,10.3049918454234,0,0,0,0,0,0,13.3441268833869,0,0,0,10.5134890418124,0,3.37006764991185,0,17.5473712534525,0,0,0,0,0,0.66343897524122,1.75380354101505,0,0,0.811641507850816,1.8589409885985,0.281695602532241,0,0,1.07001315444375,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66963057534359,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,3.99951893486892,0,0,1.04478362020812,1.8697064787778,0,0,0,0,2.97492088916001,0,10.2588552384635,22.621837948414,7.32765128953031,7.64665290678128,1.70789252563885,2.48823724704513,6.11435943483388,0.521745061811734,0.901545653983311,0,0.406870733204662,4.54621648006399,6.01499119437935,1.39210127963548,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,15.3295852214675,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,1.66847102838104,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03268301363616,2.8666168169323,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p1@CLDN14 | |||
}} |
Latest revision as of 07:52, 18 September 2015
Short description: | p1@CLDN14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN14_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000399139_5end |
EntrezGene: | CLDN14 |
HGNC: | 2035 |
UniProt: | O95500 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.44e-25 | 32 |
aortic smooth muscle cell | 7.80e-20 | 10 |
smooth muscle cell | 7.00e-18 | 43 |
smooth muscle myoblast | 7.00e-18 | 43 |
muscle cell | 4.93e-13 | 55 |
muscle precursor cell | 3.86e-12 | 58 |
myoblast | 3.86e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.86e-12 | 58 |
multi fate stem cell | 1.90e-11 | 427 |
electrically responsive cell | 2.45e-11 | 61 |
electrically active cell | 2.45e-11 | 61 |
somatic stem cell | 4.13e-11 | 433 |
stem cell | 1.12e-10 | 441 |
cardiocyte | 1.78e-09 | 16 |
classical monocyte | 2.62e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.62e-09 | 42 |
cardiac mesenchymal cell | 2.20e-08 | 4 |
migratory trunk neural crest cell | 2.20e-08 | 4 |
smooth muscle cell of the brachiocephalic vasculature | 4.45e-08 | 2 |
defensive cell | 8.38e-08 | 48 |
phagocyte | 8.38e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.17e-17 | 14 |
female reproductive organ cancer | 3.50e-12 | 27 |
reproductive organ cancer | 3.54e-11 | 29 |