FFCP PHASE1:Hg19::chr2:71693859..71693866,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8291 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3097 | |||
|TSSclassifier=strong | |||
|UniProt=O75923 | |||
|association_with_transcript=27bp_to_ENST00000394120,ENST00000409366,ENST00000409651,ENST00000409744,ENST00000410020,ENST00000410041,NM_001130455,NM_001130982,NM_001130983,NM_001130984,NM_001130985,NM_001130986,NM_001130987,uc002sif.2,uc010fej.2,uc010fek.2,uc010fel.2,uc010fem.2,uc010fen.2,uc010feo.2_5end | |||
|cluster_id=chr2:71693859..71693866,+ | |||
|description=CAGE_peak_8_at_DYSF_5end | |||
|id=chr2:71693859..71693866,+ | |||
|ontology_enrichment_celltype=CL:0000115!4.20e-22!35;CL:0002078!2.90e-21!44;CL:0002139!4.18e-18!24;CL:0000213!2.13e-16!57;CL:0000215!2.13e-16!57;CL:0000071!7.11e-14!18;CL:0002546!7.11e-14!18;CL:0000222!2.32e-09!119;CL:1000413!1.08e-07!9;CL:0000066!1.44e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.51e-50;24!CL:0000115;9.33e-44;36!CL:0000071;8.37e-38;18!CL:0002078;9.47e-29;45!CL:0000213;1.86e-19;58!CL:0000215;1.86e-19;58!CL:1000413;2.13e-19;9!CL:0002138;3.49e-14;6!CL:0002543;3.77e-14;6!CL:0002544;2.18e-13;6!CL:1000746;7.89e-12;7!CL:1000612;7.89e-12;7!CL:0002681;1.47e-08;12!CL:0002584;1.47e-08;12!CL:0002188;2.68e-08;5!CL:0002618;1.08e-07;3!CL:0002144;1.64e-07;3!CL:0000076;5.01e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.19e-52,36;CL:0002139,5.87e-51,24;CL:0002078,1.77e-45,45;CL:0000071,2.98e-38,18;CL:0002546,2.98e-38,18;CL:0000213,6.24e-33,58;CL:0000215,6.24e-33,58;CL:1000413,8.58e-20,9;CL:0005020,3.85e-14,6;CL:0002138,3.85e-14,6;CL:0005022,3.85e-14,6;CL:0002543,4.02e-14,6;CL:0002544,1.03e-13,6;CL:0000222,1.23e-13,121;CL:1000746,6.15e-12,7;CL:1000612,6.15e-12,7;CL:0000076,1.60e-11,63;CL:0000066,2.70e-10,253;CL:0002681,1.25e-08,12;CL:0002584,1.25e-08,12;CL:0002188,2.84e-08,5;CL:0002618,1.26e-07,3;CL:0002144,1.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;8.37e-38;18!CL:0005022;3.49e-14;6!CL:0000222;8.31e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!7.11e-14!18;UBERON:0004638!7.11e-14!18;UBERON:0004852!7.11e-14!18;UBERON:0000487!1.42e-11!22;UBERON:0006914!1.63e-10!25;UBERON:0001009!3.82e-09!113;UBERON:0002049!5.31e-09!79;UBERON:0007798!5.31e-09!79;UBERON:0004872!2.70e-08!84;UBERON:0004535!3.18e-08!110;UBERON:0003914!8.59e-08!118;UBERON:0003915!1.08e-07!9;UBERON:0004700!1.08e-07!9;UBERON:0001917!1.08e-07!9;UBERON:0000055!1.78e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.37e-38;18!UBERON:0001986;8.37e-38;18!UBERON:0004852;8.37e-38;18!UBERON:0000487;6.30e-30;22!UBERON:0006914;1.11e-25;25!UBERON:0000490;1.65e-20;33!UBERON:0003915;2.13e-19;9!UBERON:0004700;2.13e-19;9!UBERON:0001917;2.13e-19;9!UBERON:0000074;7.89e-12;7!UBERON:0001229;7.89e-12;7!UBERON:0000353;2.98e-11;15!UBERON:0001473;2.11e-10;8!UBERON:0004536;2.11e-10;8!UBERON:0006558;2.11e-10;8!UBERON:0000055;3.16e-10;65!UBERON:0001638;4.03e-09;9!UBERON:0003920;4.03e-09;9!UBERON:0004582;4.03e-09;9!UBERON:0001225;1.47e-08;12!UBERON:0008987;1.47e-08;12!UBERON:0002465;3.89e-08;10!UBERON:0003914;5.14e-08;74!UBERON:0007500;1.11e-07;56!UBERON:0001981;1.11e-07;56!UBERON:0004537;1.11e-07;56!UBERON:0010523;1.64e-07;3!UBERON:0001915;1.64e-07;3!UBERON:0001982;1.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.98e-38,18;UBERON:0001986,2.98e-38,18;UBERON:0004852,2.98e-38,18;UBERON:0000487,2.75e-30,22;UBERON:0006914,5.39e-26,25;UBERON:0003915,8.58e-20,9;UBERON:0004700,8.58e-20,9;UBERON:0001917,8.58e-20,9;UBERON:0000055,7.88e-18,68;UBERON:0002049,1.55e-14,78;UBERON:0007798,1.55e-14,78;UBERON:0003914,3.51e-14,117;UBERON:0004872,1.04e-13,83;UBERON:0001009,3.52e-12,112;UBERON:0007500,6.03e-12,59;UBERON:0001981,6.03e-12,59;UBERON:0004537,6.03e-12,59;UBERON:0006965,6.03e-12,59;UBERON:0010532,6.15e-12,7;UBERON:0000074,6.15e-12,7;UBERON:0001229,6.15e-12,7;UBERON:0001230,6.15e-12,7;UBERON:0003220,6.15e-12,7;UBERON:0005749,6.15e-12,7;UBERON:0004199,6.15e-12,7;UBERON:0004209,6.15e-12,7;UBERON:0004198,6.15e-12,7;UBERON:0000353,2.54e-11,15;UBERON:0003887,4.90e-11,12;UBERON:0004535,6.67e-11,109;UBERON:0000058,2.13e-10,19;UBERON:0001473,2.26e-10,8;UBERON:0004536,2.26e-10,8;UBERON:0006558,2.26e-10,8;UBERON:0005103,2.49e-10,8;UBERON:0000083,2.49e-10,8;UBERON:0009201,2.49e-10,8;UBERON:0006553,2.49e-10,8;UBERON:0003074,2.49e-10,8;UBERON:0003060,2.49e-10,8;UBERON:0001638,4.19e-09,9;UBERON:0003920,4.19e-09,9;UBERON:0004582,4.19e-09,9;UBERON:0000080,4.44e-09,9;UBERON:0002120,4.44e-09,9;UBERON:0004875,4.44e-09,9;UBERON:0005721,4.44e-09,9;UBERON:0005754,4.44e-09,9;UBERON:0007297,4.44e-09,9;UBERON:0001225,1.25e-08,12;UBERON:0008987,1.25e-08,12;UBERON:0003081,3.95e-08,203;UBERON:0002465,4.11e-08,10;UBERON:0010523,1.37e-07,3;UBERON:0001915,1.37e-07,3;UBERON:0001982,1.37e-07,3;UBERON:0004876,2.91e-07,11;UBERON:0004111,4.05e-07,240 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0.697801167972428,3.49506195408276,3.9565046734268,0.123766352960047,0,0,0,0.730310090387373,0.975865597581014,0.369363174230364,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0,0.919421224478927,0,0.369754010166788,0.0774672005803016,0,0,0,0,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,0.581592955118259,0.377875943688809,0.727752183563449,0,0.411167888021826,0,0.575384784644301,0.512321413058201,0,0.344745680736619,0,0,0.564727018627814,0.272906150057846,0.449446968890169,0.612167784741805,0.641858054152187,0.639337125799041,0.329851300186716,0.398927315243264,0.426224750532694,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.434377689410233,1.21079900526674,0,0.632924774881769,0.422510572623884,0.637812899895131,0.419317291016752,0,0,0.48217676009124,0,0.39783335439818,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0.668745981562712,0,0,0,0.111410456885174,0,0.221533894583621,0,0.512365278902701,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0,0.175669571386252,0.458426764241994,0,0.741568885568859,0,0.174129737299267,0,0,0,0,3.7764857399674,1.72046919021225,5.20710752411391,7.34900324501212,6.29249154314859,1.37559020970034,4.80688423034664,4.65150166504792,7.47109151642091,3.3472061276467,4.02829317109147,3.80136052859256,1.46437234528902,2.94130464276695,1.62028389576352,2.67899184852239,4.04152870727106,2.0270066486998,6.13266549863533,4.74632829784064,3.66403487860815,0,0,0,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0.560677600142307,2.1349799145941,0,0.311211035399766,0.942974704487816,1.14423332179421,0.302714855289863,0.576175924479999,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0,0.309977343527296,0,0,0,0,0.336672227908132,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.201504196455281,0.169560592310488,0.386521706326594,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.269662616320329,0.196221465125346,0.38474715694639,11.0723318193697,11.2193419042757,0,0,0,0,1.77236972004421,0,0.245976877086227,0.514703430895577,0.109750285408626,0,0,0.185176890317059,0,1.03993478527958,1.44331342025273,0.231860809950154,1.05667824812239,3.60916119402685,3.24089858803628,2.85381228351897,0,0.858486162094873,0,0,0.148631162288728,0,0.671928512795438,0.567100388969546,0.447792613514241,0,0,0,0.176096868026452,0,0.144119953416961,0,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0.857479297891735,0.336393253036082,0,0,0.904902010304444,3.57656445851882,0.845302752556,0.797814349754612,1.04007436911366,0,2.83698264046557,0,0,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0,0,0.479249710983165,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0.112085143993527,0,0.646882724578552,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.535286966391485,0.788512075169673,0.117141414992713,0,0,0,0,0.553107505625109,0,1.37060810223918,0.686286847621712,0,0.215714200818617,0.213455115606889,0.303127571446259,1.66435439510497,0.30239029332968,0,1.38115775959256,0.280660094433074,1.28139149255701,0,0.965123526861645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.316654886678627,4.54933536283586,6.12337338995456,4.31831832204279,4.62681758070868,1.89662506280697,2.00675909541941,0.254876273045038,0.831076008928724,1.34324852833307,0,0,0,2.29610251989794,0.325378394664303,0.206082023295445,1.92295876118521,1.48517099857058,0.574265537996172,0,0,0.386682873168488,0,0.460511024178389,0.413509717453592,0,0.145016693914229,0.852266274161009,0.890320356467374,0.330569830721956,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.632758849437452,0.38126038784765,0,0,0.318203247925937,0,0,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0,0.196498082026242,0,1.06428319221179,0.211107635297664,0.329294892959902,0.379473173765715,0.349934720244983,0.0962221127255121,0,1.08890984861323,0.847294206991012,1.72202149068492,3.36942951335251,0.886860307073351,1.83778720165568,0.507447609232169,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,1.22520107990516,0,0,0.0711418433484141,0,0.59873811429845,0,0,0,0.280797178113459,0.684704037099577,0,0,0.50787533340481,0,0,0,0,0,0,0,0.781552381608161,0,0,0,0,0,0,0.73254089635947,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0.333926115068718,0.329607748453519,0,0.398495976502139,0.276283915531148,0,0.306806047506464,0.12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| |||
|short_description=p8@DYSF | |||
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Latest revision as of 08:03, 18 September 2015
Short description: | p8@DYSF |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_DYSF_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000394120, ENST00000409366, ENST00000409651, ENST00000409744, ENST00000410020, ENST00000410041, NM_001130455, NM_001130982, NM_001130983, NM_001130984, NM_001130985, NM_001130986, NM_001130987, uc002sif.2, uc010fej.2, uc010fek.2, uc010fel.2, uc010fem.2, uc010fen.2, uc010feo.2_5end |
EntrezGene: | DYSF |
HGNC: | 3097 |
UniProt: | O75923 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.19e-52 | 36 |
endothelial cell of vascular tree | 5.87e-51 | 24 |
meso-epithelial cell | 1.77e-45 | 45 |
blood vessel endothelial cell | 2.98e-38 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.98e-38 | 18 |
lining cell | 6.24e-33 | 58 |
barrier cell | 6.24e-33 | 58 |
endothelial cell of artery | 8.58e-20 | 9 |
lymphangioblast | 3.85e-14 | 6 |
endothelial cell of lymphatic vessel | 3.85e-14 | 6 |
vascular lymphangioblast | 3.85e-14 | 6 |
vein endothelial cell | 4.02e-14 | 6 |
aortic endothelial cell | 1.03e-13 | 6 |
mesodermal cell | 1.23e-13 | 121 |
glomerular cell | 6.15e-12 | 7 |
kidney corpuscule cell | 6.15e-12 | 7 |
squamous epithelial cell | 1.60e-11 | 63 |
epithelial cell | 2.70e-10 | 253 |
kidney cortical cell | 1.25e-08 | 12 |
renal cortical epithelial cell | 1.25e-08 | 12 |
glomerular endothelial cell | 2.84e-08 | 5 |
endothelial cell of umbilical vein | 1.26e-07 | 3 |
capillary endothelial cell | 1.37e-07 | 3 |