FFCP PHASE1:Hg19::chr5:61602236..61602301,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3796 | |EntrezGene=3796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6318 | |HGNC=6318 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9M0 | |UniProt=D6R9M0 | ||
|association_with_transcript=0bp_to_ENST00000407818,ENST00000504883,ENST00000514082_5end | |association_with_transcript=0bp_to_ENST00000407818,ENST00000504883,ENST00000514082_5end | ||
|cluster_id=chr5:61602236..61602301,+ | |||
|description=CAGE_peak_1_at_KIF2A_5end | |description=CAGE_peak_1_at_KIF2A_5end | ||
|id=chr5:61602236..61602301,+ | |id=chr5:61602236..61602301,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.20e-21!53;CL:0000051!3.20e-21!53;CL:0000838!6.72e-21!52;CL:0000084!1.33e-13!25;CL:0000827!1.33e-13!25;CL:0000791!5.06e-11!18;CL:0000789!5.06e-11!18;CL:0002420!5.06e-11!18;CL:0002419!5.06e-11!18;CL:0000790!5.06e-11!18;CL:0000945!7.37e-08!24;CL:0000826!7.37e-08!24;CL:0000625!2.03e-07!11 | |ontology_enrichment_celltype=CL:0000542!3.20e-21!53;CL:0000051!3.20e-21!53;CL:0000838!6.72e-21!52;CL:0000084!1.33e-13!25;CL:0000827!1.33e-13!25;CL:0000791!5.06e-11!18;CL:0000789!5.06e-11!18;CL:0002420!5.06e-11!18;CL:0002419!5.06e-11!18;CL:0000790!5.06e-11!18;CL:0000945!7.37e-08!24;CL:0000826!7.37e-08!24;CL:0000625!2.03e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.30e-13;25!CL:0000542;3.12e-12;53!CL:0000791;5.02e-11;18!CL:0000789;5.02e-11;18!CL:0002419;5.02e-11;18!CL:0000945;7.42e-08;24!CL:0000625;2.01e-07;11 | |ontology_enrichment_celltype_v019=CL:0000084;1.30e-13;25!CL:0000542;3.12e-12;53!CL:0000791;5.02e-11;18!CL:0000789;5.02e-11;18!CL:0002419;5.02e-11;18!CL:0000945;7.42e-08;24!CL:0000625;2.01e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.20e-21,53;CL:0000051,3.20e-21,53;CL:0000838,6.72e-21,52;CL:0000084,1.33e-13,25;CL:0000827,1.33e-13,25;CL:0000791,5.06e-11,18;CL:0000789,5.06e-11,18;CL:0002420,5.06e-11,18;CL:0002419,5.06e-11,18;CL:0000790,5.06e-11,18;CL:0000945,7.37e-08,24;CL:0000826,7.37e-08,24;CL:0000625,2.03e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.12e-12;53!CL:0000790;5.02e-11;18 | |ontology_enrichment_development_v019=CL:0000051;3.12e-12;53!CL:0000790;5.02e-11;18 | ||
|ontology_enrichment_disease=DOID:2531!4.05e-13!51;DOID:0060083!4.05e-13!51;DOID:162!4.48e-11!235;DOID:14566!5.30e-11!239;DOID:1240!7.08e-11!39;DOID:0050686!1.68e-10!137;DOID:8692!1.17e-07!31 | |ontology_enrichment_disease=DOID:2531!4.05e-13!51;DOID:0060083!4.05e-13!51;DOID:162!4.48e-11!235;DOID:14566!5.30e-11!239;DOID:1240!7.08e-11!39;DOID:0050686!1.68e-10!137;DOID:8692!1.17e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;5.02e-09;39!DOID:2531;6.92e-09;51!DOID:0060083;6.92e-09;51!DOID:8692;1.19e-07;31 | |ontology_enrichment_disease_v019=DOID:1240;5.02e-09;39!DOID:2531;6.92e-09;51!DOID:0060083;6.92e-09;51!DOID:8692;1.19e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,4.05e-13,51;DOID:0060083,4.05e-13,51;DOID:162,4.48e-11,235;DOID:14566,5.30e-11,239;DOID:1240,7.08e-11,39;DOID:0050686,1.68e-10,137;DOID:8692,1.17e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.18e-10!94;UBERON:0001016!3.18e-10!94;UBERON:0001017!2.91e-09!82;UBERON:0000178!3.41e-09!15;UBERON:0000179!3.41e-09!15;UBERON:0000463!3.41e-09!15;UBERON:0005743!1.69e-08!86;UBERON:0002780!2.01e-07!41;UBERON:0001890!2.01e-07!41;UBERON:0006240!2.01e-07!41;UBERON:0001049!7.40e-07!57;UBERON:0005068!7.40e-07!57;UBERON:0006241!7.40e-07!57;UBERON:0007135!7.40e-07!57;UBERON:0003080!8.10e-07!42;UBERON:0000955!9.74e-07!69;UBERON:0006238!9.74e-07!69 | |ontology_enrichment_uberon=UBERON:0000073!3.18e-10!94;UBERON:0001016!3.18e-10!94;UBERON:0001017!2.91e-09!82;UBERON:0000178!3.41e-09!15;UBERON:0000179!3.41e-09!15;UBERON:0000463!3.41e-09!15;UBERON:0005743!1.69e-08!86;UBERON:0002780!2.01e-07!41;UBERON:0001890!2.01e-07!41;UBERON:0006240!2.01e-07!41;UBERON:0001049!7.40e-07!57;UBERON:0005068!7.40e-07!57;UBERON:0006241!7.40e-07!57;UBERON:0007135!7.40e-07!57;UBERON:0003080!8.10e-07!42;UBERON:0000955!9.74e-07!69;UBERON:0006238!9.74e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.27e-09;15!UBERON:0000179;3.27e-09;15!UBERON:0000463;3.27e-09;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.27e-09;15!UBERON:0000179;3.27e-09;15!UBERON:0000463;3.27e-09;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.40e-11,89;UBERON:0001017,9.14e-10,81;UBERON:0000178,3.41e-09,15;UBERON:0000179,3.41e-09,15;UBERON:0000463,3.41e-09,15;UBERON:0002780,2.01e-07,41;UBERON:0001890,2.01e-07,41;UBERON:0003080,2.01e-07,41;UBERON:0006240,2.01e-07,41;UBERON:0001049,2.30e-07,56;UBERON:0005068,2.30e-07,56;UBERON:0006241,2.30e-07,56;UBERON:0007135,2.30e-07,56;UBERON:0000955,3.49e-07,68;UBERON:0006238,3.49e-07,68 | |||
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| ||
|short_description=p1@KIF2A | |short_description=p1@KIF2A | ||
}} | }} |
Latest revision as of 09:19, 18 September 2015
Short description: | p1@KIF2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIF2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000407818, ENST00000504883, ENST00000514082_5end |
EntrezGene: | KIF2A |
HGNC: | 6318 |
UniProt: | D6R9M0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.20e-21 | 53 |
common lymphoid progenitor | 3.20e-21 | 53 |
lymphoid lineage restricted progenitor cell | 6.72e-21 | 52 |
T cell | 1.33e-13 | 25 |
pro-T cell | 1.33e-13 | 25 |
mature alpha-beta T cell | 5.06e-11 | 18 |
alpha-beta T cell | 5.06e-11 | 18 |
immature T cell | 5.06e-11 | 18 |
mature T cell | 5.06e-11 | 18 |
immature alpha-beta T cell | 5.06e-11 | 18 |
lymphocyte of B lineage | 7.37e-08 | 24 |
pro-B cell | 7.37e-08 | 24 |
CD8-positive, alpha-beta T cell | 2.03e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.40e-11 | 89 |
central nervous system | 9.14e-10 | 81 |
blood | 3.41e-09 | 15 |
haemolymphatic fluid | 3.41e-09 | 15 |
organism substance | 3.41e-09 | 15 |
regional part of forebrain | 2.01e-07 | 41 |
forebrain | 2.01e-07 | 41 |
anterior neural tube | 2.01e-07 | 41 |
future forebrain | 2.01e-07 | 41 |
neural tube | 2.30e-07 | 56 |
neural rod | 2.30e-07 | 56 |
future spinal cord | 2.30e-07 | 56 |
neural keel | 2.30e-07 | 56 |
brain | 3.49e-07 | 68 |
future brain | 3.49e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.05e-13 | 51 |
immune system cancer | 4.05e-13 | 51 |
cancer | 4.48e-11 | 235 |
disease of cellular proliferation | 5.30e-11 | 239 |
leukemia | 7.08e-11 | 39 |
organ system cancer | 1.68e-10 | 137 |
myeloid leukemia | 1.17e-07 | 31 |