FFCP PHASE1:Hg19::chr1:168195229..168195294,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375035,9095 | |EntrezGene=375035,9095 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25140,11596 | |HGNC=25140,11596 | ||
|TSSclassifier=strong | |||
|UniProt=O95562,Q5TIH2 | |UniProt=O95562,Q5TIH2 | ||
|association_with_transcript=0bp_to_ENST00000271375,ENST00000367825,NM_199344,uc001gfi.3,uc001gfj.3_5end | |association_with_transcript=0bp_to_ENST00000271375,ENST00000367825,NM_199344,uc001gfi.3,uc001gfj.3_5end | ||
|cluster_id=chr1:168195229..168195294,+ | |||
|coexpression_cluster_id=C992 | |||
|description=CAGE_peak_1_at_SFT2D2_5end,CAGE_peak_1_at_TBX19_5end | |description=CAGE_peak_1_at_SFT2D2_5end,CAGE_peak_1_at_TBX19_5end | ||
|id=chr1:168195229..168195294,+ | |id=chr1:168195229..168195294,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.72e-39!140;CL:0002087!3.75e-34!119;CL:0000037!4.33e-34!172;CL:0000566!4.33e-34!172;CL:0000988!3.70e-33!182;CL:0002031!9.44e-33!124;CL:0002032!4.21e-31!165;CL:0000837!4.21e-31!165;CL:0000134!3.26e-23!358;CL:0002009!6.16e-23!65;CL:0000766!1.08e-22!76;CL:0000557!3.63e-22!71;CL:0002320!6.70e-22!365;CL:0002194!1.13e-21!63;CL:0000576!1.13e-21!63;CL:0000040!1.13e-21!63;CL:0000559!1.13e-21!63;CL:0000219!2.17e-21!390;CL:0000839!1.79e-20!70;CL:0002057!1.62e-19!42;CL:0000763!4.28e-19!112;CL:0000049!4.28e-19!112;CL:0000860!8.71e-18!45;CL:0000063!1.54e-11!578;CL:0000048!3.10e-11!430;CL:0000542!3.15e-11!53;CL:0000051!3.15e-11!53;CL:0000838!5.27e-11!52;CL:0000723!5.46e-11!436;CL:0000034!2.67e-10!444;CL:0000003!1.13e-08!722;CL:0000236!1.36e-07!14;CL:0000084!1.91e-07!25;CL:0000827!1.91e-07!25;CL:0000451!2.27e-07!10;CL:0000791!3.33e-07!18;CL:0000789!3.33e-07!18;CL:0002420!3.33e-07!18;CL:0002419!3.33e-07!18;CL:0000790!3.33e-07!18;CL:0002371!6.42e-07!591;CL:0000144!8.88e-07!625 | |ontology_enrichment_celltype=CL:0000738!2.72e-39!140;CL:0002087!3.75e-34!119;CL:0000037!4.33e-34!172;CL:0000566!4.33e-34!172;CL:0000988!3.70e-33!182;CL:0002031!9.44e-33!124;CL:0002032!4.21e-31!165;CL:0000837!4.21e-31!165;CL:0000134!3.26e-23!358;CL:0002009!6.16e-23!65;CL:0000766!1.08e-22!76;CL:0000557!3.63e-22!71;CL:0002320!6.70e-22!365;CL:0002194!1.13e-21!63;CL:0000576!1.13e-21!63;CL:0000040!1.13e-21!63;CL:0000559!1.13e-21!63;CL:0000219!2.17e-21!390;CL:0000839!1.79e-20!70;CL:0002057!1.62e-19!42;CL:0000763!4.28e-19!112;CL:0000049!4.28e-19!112;CL:0000860!8.71e-18!45;CL:0000063!1.54e-11!578;CL:0000048!3.10e-11!430;CL:0000542!3.15e-11!53;CL:0000051!3.15e-11!53;CL:0000838!5.27e-11!52;CL:0000723!5.46e-11!436;CL:0000034!2.67e-10!444;CL:0000003!1.13e-08!722;CL:0000236!1.36e-07!14;CL:0000084!1.91e-07!25;CL:0000827!1.91e-07!25;CL:0000451!2.27e-07!10;CL:0000791!3.33e-07!18;CL:0000789!3.33e-07!18;CL:0002420!3.33e-07!18;CL:0002419!3.33e-07!18;CL:0000790!3.33e-07!18;CL:0002371!6.42e-07!591;CL:0000144!8.88e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-13;33!CL:0002057;1.13e-13;33!CL:0000473;1.52e-13;39!CL:0000234;1.52e-13;39!CL:0000576;1.73e-13;48!CL:0000766;1.60e-10;69!CL:0002087;2.42e-10;104!CL:0000738;2.53e-09;136!CL:0000236;3.75e-08;13!CL:0000542;1.54e-07;53!CL:0000084;1.92e-07;25!CL:0000451;2.33e-07;10!CL:0000791;3.47e-07;18!CL:0000789;3.47e-07;18!CL:0002419;3.47e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.72e-41,136;CL:0002087,2.10e-36,115;CL:0000037,8.67e-36,168;CL:0000988,3.23e-35,177;CL:0002031,7.24e-35,120;CL:0002032,9.61e-33,161;CL:0000837,9.61e-33,161;CL:0002009,1.27e-25,61;CL:0000766,4.83e-25,72;CL:0000557,1.33e-24,67;CL:0002194,2.61e-24,59;CL:0000576,2.61e-24,59;CL:0000040,2.61e-24,59;CL:0000559,2.61e-24,59;CL:0000134,8.02e-24,354;CL:0000839,8.61e-23,66;CL:0002320,1.76e-22,361;CL:0000219,6.20e-22,386;CL:0000473,6.30e-22,48;CL:0000234,6.30e-22,48;CL:0000763,1.24e-20,108;CL:0000049,1.24e-20,108;CL:0000860,1.62e-19,42;CL:0002057,1.62e-19,42;CL:0000048,1.59e-11,427;CL:0000723,2.84e-11,433;CL:0000542,3.15e-11,53;CL:0000051,3.15e-11,53;CL:0000838,5.27e-11,52;CL:0000034,1.43e-10,441;CL:0000236,1.36e-07,14;CL:0000084,1.91e-07,25;CL:0000827,1.91e-07,25;CL:0000451,2.27e-07,10;CL:0000791,3.33e-07,18;CL:0000789,3.33e-07,18;CL:0002420,3.33e-07,18;CL:0002419,3.33e-07,18;CL:0000790,3.33e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.05e-14;42!CL:0000051;1.54e-07;53!CL:0000790;3.47e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.59e-25!102;UBERON:0003061!7.59e-25!102;UBERON:0002193!5.20e-24!112;UBERON:0002384!2.58e-19!375;UBERON:0002371!9.39e-19!80;UBERON:0001474!1.86e-16!86;UBERON:0002405!2.33e-15!115;UBERON:0004765!6.99e-15!101;UBERON:0001434!6.99e-15!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.54e-27,98;UBERON:0003061,7.54e-27,98;UBERON:0002193,7.89e-26,108;UBERON:0002405,2.45e-21,93;UBERON:0002371,1.05e-20,76;UBERON:0002384,7.64e-20,371;UBERON:0001474,3.95e-18,82;UBERON:0004765,2.26e-17,90;UBERON:0001434,2.46e-15,100 | |||
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|short_description=p1@SFT2D2,p1@TBX19 | |short_description=p1@SFT2D2,p1@TBX19 | ||
}} | }} |
Latest revision as of 12:13, 18 September 2015
Short description: | p1@SFT2D2, p1@TBX19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFT2D2_5end, CAGE_peak_1_at_TBX19_5end |
Coexpression cluster: | C992_Dendritic_melanoma_immature_CD19_Basophils_CD14_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000271375, ENST00000367825, NM_199344, uc001gfi.3, uc001gfj.3_5end |
EntrezGene: | 375035,9095 |
HGNC: | 11596&submit=Submit 25140, 11596 |
UniProt: | O95562Q5TIH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.54e-27 | 98 |
blood island | 7.54e-27 | 98 |
hemolymphoid system | 7.89e-26 | 108 |
immune system | 2.45e-21 | 93 |
bone marrow | 1.05e-20 | 76 |
connective tissue | 7.64e-20 | 371 |
bone element | 3.95e-18 | 82 |
skeletal element | 2.26e-17 | 90 |
skeletal system | 2.46e-15 | 100 |