FFCP PHASE1:Hg19::chr11:59437000..59437035,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:59437000..59437035,- to FFCP PHASE1:Hg19::chr11:59437000..59437035,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=219988 | |EntrezGene=219988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26721 | |HGNC=26721 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB9 | |UniProt=Q86TB9 | ||
|association_with_transcript=-489bp_to_NM_152716,uc001noe.3,uc009yms.1_5end | |||
|cluster_id=chr11:59437000..59437035,- | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_5_at_PATL1_5end | |||
|id=chr11:59437000..59437035,- | |||
|ontology_enrichment_celltype=CL:0000738!6.14e-29!140;CL:0002087!7.33e-26!119;CL:0002031!3.04e-25!124;CL:0000860!5.76e-21!45;CL:0002057!7.14e-20!42;CL:0000037!1.35e-17!172;CL:0000566!1.35e-17!172;CL:0002032!6.78e-16!165;CL:0000837!6.78e-16!165;CL:0000988!1.46e-15!182;CL:0000557!1.68e-15!71;CL:0002009!1.74e-15!65;CL:0000766!2.29e-15!76;CL:0002194!2.10e-14!63;CL:0000576!2.10e-14!63;CL:0000040!2.10e-14!63;CL:0000559!2.10e-14!63;CL:0000839!5.68e-14!70;CL:0000838!2.36e-10!52;CL:0000542!6.54e-10!53;CL:0000051!6.54e-10!53;CL:0002393!5.70e-08!9;CL:0002397!5.70e-08!9;CL:0000763!2.40e-07!112;CL:0000049!2.40e-07!112;CL:0000791!5.90e-07!18;CL:0000789!5.90e-07!18;CL:0002420!5.90e-07!18;CL:0002419!5.90e-07!18;CL:0000790!5.90e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.64e-19;6!CL:0000791;2.51e-13;18!CL:0000789;2.51e-13;18!CL:0002419;2.51e-13;18!CL:0002393;1.03e-12;6!CL:0002397;1.03e-12;6!CL:0002087;5.94e-11;104!CL:0000576;1.26e-10;48!CL:0000623;1.30e-10;3!CL:0000898;3.23e-10;3!CL:0000767;5.36e-10;3!CL:0000226;1.56e-09;3!CL:0000842;1.56e-09;3!CL:0000860;3.35e-09;33!CL:0002057;3.35e-09;33!CL:0000084;4.54e-09;25!CL:0000542;5.14e-09;53!CL:0000766;9.03e-08;69!CL:0000815;2.31e-07;2!CL:0000792;2.31e-07;2!CL:0002677;2.31e-07;2!CL:0000473;6.52e-07;39!CL:0000234;6.52e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.94e-33,136;CL:0002087,1.21e-30,115;CL:0002031,1.24e-25,120;CL:0000037,1.81e-24,168;CL:0000988,1.15e-22,177;CL:0002032,1.65e-20,161;CL:0000837,1.65e-20,161;CL:0000860,2.21e-20,42;CL:0002057,2.21e-20,42;CL:0000624,1.66e-19,6;CL:0000473,3.16e-17,48;CL:0000234,3.16e-17,48;CL:0002393,1.52e-15,9;CL:0002397,1.52e-15,9;CL:0000838,4.70e-14,52;CL:0002009,6.67e-14,61;CL:0000766,6.72e-14,72;CL:0000542,1.05e-13,53;CL:0000051,1.05e-13,53;CL:0000791,2.46e-13,18;CL:0000789,2.46e-13,18;CL:0002420,2.46e-13,18;CL:0002419,2.46e-13,18;CL:0000790,2.46e-13,18;CL:0002194,7.76e-13,59;CL:0000576,7.76e-13,59;CL:0000040,7.76e-13,59;CL:0000559,7.76e-13,59;CL:0000557,3.06e-12,67;CL:0000839,5.13e-11,66;CL:0000623,1.29e-10,3;CL:0000825,1.29e-10,3;CL:0000898,3.20e-10,3;CL:0000767,4.78e-10,3;CL:0000226,1.55e-09,3;CL:0000842,1.55e-09,3;CL:0000084,4.48e-09,25;CL:0000827,4.48e-09,25;CL:0000763,1.53e-08,108;CL:0000049,1.53e-08,108;CL:0000815,2.12e-07,2;CL:0000792,2.12e-07,2;CL:0002677,2.12e-07,2;CL:0000134,3.55e-07,354;CL:0002320,7.71e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.00e-15;42!CL:0000790;2.51e-13;18!CL:0000051;5.14e-09;53 | |||
|ontology_enrichment_disease=DOID:305!2.98e-11!106;DOID:0050687!8.79e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.21e-11!80;UBERON:0002390!5.79e-11!102;UBERON:0003061!5.79e-11!102;UBERON:0001474!5.82e-11!86;UBERON:0002193!2.00e-09!112;UBERON:0002405!2.05e-07!115;UBERON:0004765!3.06e-07!101;UBERON:0001434!3.06e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.47e-11,98;UBERON:0003061,5.47e-11,98;UBERON:0002371,3.01e-10,76;UBERON:0002193,1.87e-09,108;UBERON:0001474,3.62e-09,82;UBERON:0002405,1.46e-08,93;UBERON:0004765,5.84e-08,90;UBERON:0001434,9.80e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0.152826811495903,0.0821005894499457,0,2.36018566109342,3.83829398097213,1.39334510984468,0.919421224478927,0,0,0,0.284338464974843,0,2.76997704265939,3.20871115952227,2.60413044859022,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0,1.39457422143411,0.822335776043652,0.309706370895104,1.7261543539329,1.0246428261164,0.236482229888585,1.37898272294647,0.645484683583826,0,0.941211697713023,1.09162460023138,0.449446968890169,0.306083892370903,1.60464513538047,1.91801137739712,0.329851300186716,0.598390972864896,1.27867425159808,1.16083695451434,0.56738522469114,1.24564449799115,2.00998932205395,0.521482918420201,1.73751075764093,0,0.736555271975129,0.316462387440884,0.633765858935825,1.06302149982522,1.04829322754188,0,0.450530678524519,0.16072558669708,1.42506371870624,0.59675003159727,1.64397738388171,0,0,0.889509253863555,3.41384178053206,0.800791974072025,1.72425731986345,0,0,8.53819453664173,5.28513470433845,6.88091810625412,0,1.12101712596307,0,6.29471264364266,6.6811829667358,5.96244347098577,0.501559486172034,2.28145586643513,0.946895611469467,1.94826728407911,0.445641827540694,2.94605907474837,2.43687284041983,2.16643091012012,1.15282187753108,0.260118695119756,0.328875809207352,0,0.289803085735052,2.66915813691709,1.33770414044857,1.04535523804977,0.113309342697566,2.29932296161153,3.77990190030893,2.02415753615602,0.318565414324097,0,0.950452044448374,0.451725357233318,0,0,0.236777252044017,0,4.23374160771938,4.54648332831962,4.48955652036677,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0.238490624305342,0,1.11437250398869,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0,0.109750285408626,1.1240175325762,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.864719720501769,0.75745460055828,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,2.56139988262505,4.09692392233083,4.36366323351144,0.508189248444927,0,0,0,0,0,0,0.828831026872071,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,2.37285620900479,1.06727557803444,0.909382714338778,0,0,0,0,0.280660094433074,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0.0920809889358963,0.229628896329213,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0.192190067365106,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0.320472213382419,0,0.735120647943095,0,0,0.355709216742071,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.121360521749513,0.222886768554957,0,1.19372242368845,0,0.614321404198464,0,0,0.222617410045812,0.16480387422676,0,0.19924798825107,0,0,0.613612095012929,0.246169610922139,0,0.179736702294654,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0.236387681767936,0.344743373241465,0.291604613383254,0,0,0,1.52581736317083,0,0,0,0.32681539055697,0.557694977114413,0,0,0.46112780877612,0.628303510868405,0.217294743844016,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,1.13082457147153,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0.104421949505455,0,0,0,0,1.56531695145672,0,0,0,0.61214552326098,0.126373159256976,0.60129367765797,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.293977192243133,0.522355239482415,0,0,0.483781656445426,0.292357268344742,0.246346371159628,0.0969890164884194,0,0,0,0.397429223405979,0.126621591911757,0,0.240476460754601,0.213452994739353,0.19980960958213,0.144090417154106,0.343609788497747,0.514784993585894,0.14405479798815,0.124252535565433,0,0,0,0.101998217636322,0.577901179803038,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0.134366944973453,0,1.16495949527454,0.0787831823072236,0.0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| ||
|short_description=p5@PATL1 | |||
}} | }} |
Latest revision as of 12:27, 18 September 2015
Short description: | p5@PATL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PATL1_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | -489bp_to_NM_152716, uc001noe.3, uc009yms.1_5end |
EntrezGene: | PATL1 |
HGNC: | 26721 |
UniProt: | Q86TB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.47e-11 | 98 |
blood island | 5.47e-11 | 98 |
bone marrow | 3.01e-10 | 76 |
hemolymphoid system | 1.87e-09 | 108 |
bone element | 3.62e-09 | 82 |
immune system | 1.46e-08 | 93 |
skeletal element | 5.84e-08 | 90 |
skeletal system | 9.80e-07 | 100 |