FFCP PHASE1:Hg19::chr8:55528641..55528674,+: Difference between revisions
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|id=chr8:55528641..55528674,+
|short_description=p1@RP1
|description=CAGE_peak_1_at_RP1_5end
|association_with_transcript=14bp_to_ENST00000220676,NM_006269,uc003xsd...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6101 | |EntrezGene=6101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10263 | |HGNC=10263 | ||
|TSSclassifier=strong | |||
|UniProt=P56715 | |UniProt=P56715 | ||
|association_with_transcript=14bp_to_ENST00000220676,NM_006269,uc003xsd.1_5end | |||
|cluster_id=chr8:55528641..55528674,+ | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_RP1_5end | |||
|id=chr8:55528641..55528674,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;1.57e-09;4!CL:0002222;1.57e-09;4!CL:0002224;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.57e-09,4;CL:0002222,1.57e-09,4;CL:0002224,1.57e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.77e-45;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.32e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.32e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!3.53e-22!2;UBERON:0002757!3.53e-22!2;UBERON:0010134!3.53e-22!2;UBERON:0002784!3.53e-22!2;UBERON:0005408!3.53e-22!2;UBERON:0001899!3.53e-22!2;UBERON:0003296!1.40e-11!4;UBERON:0010133!1.40e-11!4;UBERON:0001882!1.81e-11!1;UBERON:0005403!1.81e-11!1;UBERON:0000966!1.25e-09!5;UBERON:0005388!1.25e-09!5;UBERON:0001802!1.25e-09!5;UBERON:0000970!6.73e-09!20;UBERON:0002104!1.76e-08!21;UBERON:0000020!9.33e-08!23;UBERON:0001032!1.94e-07!24;UBERON:0004456!1.94e-07!24;UBERON:0001894!5.51e-07!7;UBERON:0006222!5.51e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.38e-27;5!UBERON:0005388;2.38e-27;5!UBERON:0001802;2.38e-27;5!UBERON:0000970;6.34e-27;20!UBERON:0002104;1.12e-25;21!UBERON:0000020;1.64e-23;23!UBERON:0001032;1.46e-22;24!UBERON:0004456;1.46e-22;24!UBERON:0001905;1.27e-17;2!UBERON:0002757;1.27e-17;2!UBERON:0010134;1.27e-17;2!UBERON:0005408;1.27e-17;2!UBERON:0001899;1.27e-17;2!UBERON:0000019;2.27e-16;19!UBERON:0000047;2.27e-16;19!UBERON:0004088;2.27e-16;19!UBERON:0010230;2.27e-16;19!UBERON:0001456;6.85e-15;21!UBERON:0010077;1.57e-09;4!UBERON:0005389;1.57e-09;4!UBERON:0000484;1.57e-09;4!UBERON:0000965;1.57e-09;4!UBERON:0001803;1.57e-09;4!UBERON:0003296;1.70e-09;4!UBERON:0010133;1.70e-09;4!UBERON:0002784;1.70e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.12e-25,21;UBERON:0002104,1.12e-25,21;UBERON:0000966,5.43e-23,6;UBERON:0005388,5.43e-23,6;UBERON:0001802,5.43e-23,6;UBERON:0000020,1.46e-22,24;UBERON:0001032,1.46e-22,24;UBERON:0004456,1.46e-22,24;UBERON:0001905,1.27e-17,2;UBERON:0002757,1.27e-17,2;UBERON:0010134,1.27e-17,2;UBERON:0005408,1.27e-17,2;UBERON:0001899,1.27e-17,2;UBERON:0000019,1.36e-15,20;UBERON:0000047,1.36e-15,20;UBERON:0010312,1.36e-15,20;UBERON:0004088,1.36e-15,20;UBERON:0010230,1.36e-15,20;UBERON:0003072,1.36e-15,20;UBERON:0004128,1.36e-15,20;UBERON:0003071,1.36e-15,20;UBERON:0001456,2.99e-14,22;UBERON:0005085,2.44e-10,31;UBERON:0010077,1.57e-09,4;UBERON:0005389,1.57e-09,4;UBERON:0000484,1.57e-09,4;UBERON:0002546,1.57e-09,4;UBERON:0000965,1.57e-09,4;UBERON:0001803,1.57e-09,4;UBERON:0003073,1.57e-09,4;UBERON:0005426,1.57e-09,4;UBERON:0003296,1.70e-09,4;UBERON:0010133,1.70e-09,4;UBERON:0002784,1.70e-09,4;UBERON:0003056,4.62e-09,61;UBERON:0003075,6.85e-07,82;UBERON:0007284,6.85e-07,82;UBERON:0001444,8.57e-07,49 | |||
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|short_description=p1@RP1 | |||
}} | }} |
Latest revision as of 12:47, 18 September 2015
Short description: | p1@RP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RP1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 14bp_to_ENST00000220676, NM_006269, uc003xsd.1_5end |
EntrezGene: | RP1 |
HGNC: | 10263 |
UniProt: | P56715 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.57e-09 | 4 |
vertebrate lens cell | 1.57e-09 | 4 |
lens epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.32e-09 | 4 |