FFCP PHASE1:Hg19::chr19:44809143..44809187,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:44809143..44809187,-
|short_description=p1@ZNF235
|description=CAGE_peak_1_at_ZNF235_5end
|association_with_transcript=0bp_to_ENST00000291182,NM_004234,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9310 | |EntrezGene=9310 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12866 | |HGNC=12866 | ||
|TSSclassifier=strong | |||
|UniProt=Q14590 | |UniProt=Q14590 | ||
|association_with_transcript=0bp_to_ENST00000291182,NM_004234,uc002oza.3,uc002ozb.3,uc010eji.2,uc010xwx.1_5end | |||
|cluster_id=chr19:44809143..44809187,- | |||
|coexpression_cluster_id=C1234 | |||
|description=CAGE_peak_1_at_ZNF235_5end | |||
|id=chr19:44809143..44809187,- | |||
|ontology_enrichment_celltype=CL:0000542!2.24e-09!53;CL:0000051!2.24e-09!53;CL:0000838!4.94e-09!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.60e-10,53;CL:0000051,9.60e-10,53;CL:0000838,2.18e-09,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.39e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-36!115;UBERON:0001049!2.63e-22!57;UBERON:0005068!2.63e-22!57;UBERON:0006241!2.63e-22!57;UBERON:0007135!2.63e-22!57;UBERON:0001017!1.22e-20!82;UBERON:0005743!3.49e-20!86;UBERON:0000073!4.00e-20!94;UBERON:0001016!4.00e-20!94;UBERON:0002616!1.48e-19!59;UBERON:0002780!1.51e-18!41;UBERON:0001890!1.51e-18!41;UBERON:0006240!1.51e-18!41;UBERON:0003080!1.67e-18!42;UBERON:0000955!3.67e-18!69;UBERON:0006238!3.67e-18!69;UBERON:0001893!1.15e-15!34;UBERON:0002020!2.81e-15!34;UBERON:0003528!2.81e-15!34;UBERON:0002791!4.52e-15!33;UBERON:0002346!1.53e-14!90;UBERON:0001869!1.79e-14!32;UBERON:0003075!4.45e-14!86;UBERON:0007284!4.45e-14!86;UBERON:0002619!3.28e-12!22;UBERON:0000924!1.80e-11!173;UBERON:0006601!1.80e-11!173;UBERON:0000956!2.10e-11!25;UBERON:0000203!2.10e-11!25;UBERON:0000153!3.16e-11!129;UBERON:0007811!3.16e-11!129;UBERON:0001950!3.60e-11!20;UBERON:0004121!5.32e-11!169;UBERON:0003056!1.23e-10!61;UBERON:0000033!7.86e-10!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.73e-14;41!UBERON:0001890;5.73e-14;41!UBERON:0001893;1.15e-13;34!UBERON:0003528;1.54e-13;34!UBERON:0002020;1.54e-13;34!UBERON:0000073;1.99e-13;53!UBERON:0002616;1.99e-13;53!UBERON:0002791;2.31e-13;32!UBERON:0001869;2.35e-13;32!UBERON:0002619;2.02e-12;22!UBERON:0000956;1.24e-11;25!UBERON:0000203;1.24e-11;25!UBERON:0001950;2.39e-11;20!UBERON:0007023;2.23e-10;114!UBERON:0001017;5.51e-09;75!UBERON:0000955;1.74e-08;68!UBERON:0001016;4.10e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.14e-36,114;UBERON:0001049,1.06e-22,56;UBERON:0005068,1.06e-22,56;UBERON:0006241,1.06e-22,56;UBERON:0007135,1.06e-22,56;UBERON:0000073,2.30e-21,53;UBERON:0002616,2.30e-21,53;UBERON:0001017,3.89e-20,81;UBERON:0001016,8.98e-20,89;UBERON:0002780,4.85e-19,41;UBERON:0001890,4.85e-19,41;UBERON:0003080,4.85e-19,41;UBERON:0006240,4.85e-19,41;UBERON:0000955,1.37e-17,68;UBERON:0006238,1.37e-17,68;UBERON:0001893,4.46e-16,34;UBERON:0003528,1.12e-15,34;UBERON:0002020,1.12e-15,34;UBERON:0001869,7.57e-15,32;UBERON:0002791,8.09e-15,32;UBERON:0002346,3.75e-14,86;UBERON:0003075,1.11e-13,82;UBERON:0007284,1.11e-13,82;UBERON:0002619,1.61e-12,22;UBERON:0000956,1.09e-11,25;UBERON:0000203,1.09e-11,25;UBERON:0011216,1.50e-11,223;UBERON:0003056,1.79e-11,61;UBERON:0001950,1.89e-11,20;UBERON:0010371,2.23e-10,104;UBERON:0004121,1.16e-09,171;UBERON:0000924,1.16e-09,171;UBERON:0006601,1.16e-09,171 | |||
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| ||
|short_description=p1@ZNF235 | |||
}} | }} |
Latest revision as of 13:16, 18 September 2015
Short description: | p1@ZNF235 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF235_5end |
Coexpression cluster: | C1234_cerebellum_parietal_pineal_duodenum_occipital_temporal_thalamus |
Association with transcript: | 0bp_to_ENST00000291182, NM_004234, uc002oza.3, uc002ozb.3, uc010eji.2, uc010xwx.1_5end |
EntrezGene: | ZNF235 |
HGNC: | 12866 |
UniProt: | Q14590 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.60e-10 | 53 |
common lymphoid progenitor | 9.60e-10 | 53 |
lymphoid lineage restricted progenitor cell | 2.18e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.14e-36 | 114 |
neural tube | 1.06e-22 | 56 |
neural rod | 1.06e-22 | 56 |
future spinal cord | 1.06e-22 | 56 |
neural keel | 1.06e-22 | 56 |
regional part of nervous system | 2.30e-21 | 53 |
regional part of brain | 2.30e-21 | 53 |
central nervous system | 3.89e-20 | 81 |
nervous system | 8.98e-20 | 89 |
regional part of forebrain | 4.85e-19 | 41 |
forebrain | 4.85e-19 | 41 |
anterior neural tube | 4.85e-19 | 41 |
future forebrain | 4.85e-19 | 41 |
brain | 1.37e-17 | 68 |
future brain | 1.37e-17 | 68 |
telencephalon | 4.46e-16 | 34 |
brain grey matter | 1.12e-15 | 34 |
gray matter | 1.12e-15 | 34 |
cerebral hemisphere | 7.57e-15 | 32 |
regional part of telencephalon | 8.09e-15 | 32 |
neurectoderm | 3.75e-14 | 86 |
neural plate | 1.11e-13 | 82 |
presumptive neural plate | 1.11e-13 | 82 |
regional part of cerebral cortex | 1.61e-12 | 22 |
cerebral cortex | 1.09e-11 | 25 |
pallium | 1.09e-11 | 25 |
organ system subdivision | 1.50e-11 | 223 |
pre-chordal neural plate | 1.79e-11 | 61 |
neocortex | 1.89e-11 | 20 |
ecto-epithelium | 2.23e-10 | 104 |
ectoderm-derived structure | 1.16e-09 | 171 |
ectoderm | 1.16e-09 | 171 |
presumptive ectoderm | 1.16e-09 | 171 |