FFCP PHASE1:Hg19::chr19:45251943..45252006,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=602 | |EntrezGene=602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=998 | |HGNC=998 | ||
|TSSclassifier=strong | |||
|UniProt=P20749 | |UniProt=P20749 | ||
|association_with_transcript=0bp_to_NM_005178,uc010xxe.1_5end | |association_with_transcript=0bp_to_NM_005178,uc010xxe.1_5end | ||
|cluster_id=chr19:45251943..45252006,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_BCL3_5end | |description=CAGE_peak_1_at_BCL3_5end | ||
|id=chr19:45251943..45252006,+ | |id=chr19:45251943..45252006,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.16e-22!42;CL:0000766!1.73e-21!76;CL:0000860!4.40e-20!45;CL:0000557!3.54e-18!71;CL:0002009!6.65e-17!65;CL:0002194!6.85e-16!63;CL:0000576!6.85e-16!63;CL:0000040!6.85e-16!63;CL:0000559!6.85e-16!63;CL:0000839!3.92e-15!70;CL:0000738!2.28e-14!140;CL:0000763!1.05e-09!112;CL:0000049!1.05e-09!112;CL:0002371!4.96e-09!591;CL:0002087!1.89e-08!119;CL:0002031!2.07e-08!124;CL:0000048!2.68e-08!430;CL:0000183!3.38e-08!59;CL:0000187!1.14e-07!54;CL:0000723!1.81e-07!436;CL:0000988!2.30e-07!182;CL:0000680!2.72e-07!57;CL:0000056!2.72e-07!57;CL:0000355!2.72e-07!57;CL:0000222!5.54e-07!119 | |ontology_enrichment_celltype=CL:0002057!7.16e-22!42;CL:0000766!1.73e-21!76;CL:0000860!4.40e-20!45;CL:0000557!3.54e-18!71;CL:0002009!6.65e-17!65;CL:0002194!6.85e-16!63;CL:0000576!6.85e-16!63;CL:0000040!6.85e-16!63;CL:0000559!6.85e-16!63;CL:0000839!3.92e-15!70;CL:0000738!2.28e-14!140;CL:0000763!1.05e-09!112;CL:0000049!1.05e-09!112;CL:0002371!4.96e-09!591;CL:0002087!1.89e-08!119;CL:0002031!2.07e-08!124;CL:0000048!2.68e-08!430;CL:0000183!3.38e-08!59;CL:0000187!1.14e-07!54;CL:0000723!1.81e-07!436;CL:0000988!2.30e-07!182;CL:0000680!2.72e-07!57;CL:0000056!2.72e-07!57;CL:0000355!2.72e-07!57;CL:0000222!5.54e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.74e-19;33!CL:0002057;1.74e-19;33!CL:0000473;1.02e-16;39!CL:0000234;1.02e-16;39!CL:0000576;4.14e-12;48!CL:0000766;1.79e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.01e-22,72;CL:0000473,1.95e-22,48;CL:0000234,1.95e-22,48;CL:0000860,7.12e-22,42;CL:0002057,7.12e-22,42;CL:0000557,2.66e-19,67;CL:0002009,4.79e-18,61;CL:0002194,5.33e-17,59;CL:0000576,5.33e-17,59;CL:0000040,5.33e-17,59;CL:0000559,5.33e-17,59;CL:0000839,4.45e-16,66;CL:0000738,6.91e-15,136;CL:0000763,4.28e-10,108;CL:0000049,4.28e-10,108;CL:0002087,8.28e-09,115;CL:0002031,9.46e-09,120;CL:0000048,1.26e-08,427;CL:0000723,8.59e-08,433;CL:0000187,9.37e-08,55;CL:0000988,1.08e-07,177;CL:0000680,2.23e-07,58;CL:0000056,2.23e-07,58;CL:0000355,2.23e-07,58;CL:0000034,5.70e-07,441;CL:0000222,5.98e-07,121;CL:0000037,6.71e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;3.11e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.08e-26!216;UBERON:0002193!2.68e-23!112;UBERON:0002390!1.28e-22!102;UBERON:0003061!1.28e-22!102;UBERON:0002204!8.80e-21!167;UBERON:0000926!3.64e-20!448;UBERON:0004120!3.64e-20!448;UBERON:0006603!3.64e-20!448;UBERON:0002371!1.63e-17!80;UBERON:0002405!2.97e-17!115;UBERON:0001474!7.67e-15!86;UBERON:0004765!2.74e-13!101;UBERON:0001434!2.74e-13!101;UBERON:0001009!3.63e-12!113;UBERON:0004535!1.18e-11!110;UBERON:0003914!2.70e-09!118;UBERON:0005256!7.10e-08!143;UBERON:0000178!1.11e-07!15;UBERON:0000179!1.11e-07!15;UBERON:0000463!1.11e-07!15;UBERON:0004872!9.62e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.13e-07;15!UBERON:0000179;1.13e-07;15!UBERON:0000463;1.13e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.27e-25,203;UBERON:0002193,3.38e-24,108;UBERON:0002390,1.40e-23,98;UBERON:0003061,1.40e-23,98;UBERON:0002204,1.67e-22,167;UBERON:0000926,1.54e-18,315;UBERON:0004120,1.54e-18,315;UBERON:0006603,1.54e-18,315;UBERON:0002371,1.78e-18,76;UBERON:0002405,4.67e-18,93;UBERON:0004765,2.74e-16,90;UBERON:0001474,1.33e-15,82;UBERON:0001434,7.18e-15,100;UBERON:0001009,3.65e-12,112;UBERON:0004535,1.19e-11,109;UBERON:0003914,3.22e-09,117;UBERON:0003104,1.81e-08,160;UBERON:0009142,1.81e-08,160;UBERON:0005256,7.69e-08,122;UBERON:0000178,1.11e-07,15;UBERON:0000179,1.11e-07,15;UBERON:0000463,1.11e-07,15;UBERON:0002100,7.62e-07,199;UBERON:0002385,9.86e-07,64;UBERON:0001015,9.86e-07,64;UBERON:0000383,9.86e-07,64;UBERON:0004872,9.89e-07,83 | |||
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| ||
|short_description=p1@BCL3 | |short_description=p1@BCL3 | ||
}} | }} |
Latest revision as of 14:03, 18 September 2015
Short description: | p1@BCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BCL3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_NM_005178, uc010xxe.1_5end |
EntrezGene: | BCL3 |
HGNC: | 998 |
UniProt: | P20749 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.01e-22 | 72 |
defensive cell | 1.95e-22 | 48 |
phagocyte | 1.95e-22 | 48 |
classical monocyte | 7.12e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.12e-22 | 42 |
granulocyte monocyte progenitor cell | 2.66e-19 | 67 |
macrophage dendritic cell progenitor | 4.79e-18 | 61 |
monopoietic cell | 5.33e-17 | 59 |
monocyte | 5.33e-17 | 59 |
monoblast | 5.33e-17 | 59 |
promonocyte | 5.33e-17 | 59 |
myeloid lineage restricted progenitor cell | 4.45e-16 | 66 |
leukocyte | 6.91e-15 | 136 |
myeloid cell | 4.28e-10 | 108 |
common myeloid progenitor | 4.28e-10 | 108 |
nongranular leukocyte | 8.28e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 9.46e-09 | 120 |
multi fate stem cell | 1.26e-08 | 427 |
somatic stem cell | 8.59e-08 | 433 |
muscle cell | 9.37e-08 | 55 |
hematopoietic cell | 1.08e-07 | 177 |
muscle precursor cell | 2.23e-07 | 58 |
myoblast | 2.23e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.23e-07 | 58 |
stem cell | 5.70e-07 | 441 |
mesodermal cell | 5.98e-07 | 121 |
hematopoietic stem cell | 6.71e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.27e-25 | 203 |
hemolymphoid system | 3.38e-24 | 108 |
hematopoietic system | 1.40e-23 | 98 |
blood island | 1.40e-23 | 98 |
musculoskeletal system | 1.67e-22 | 167 |
mesoderm | 1.54e-18 | 315 |
mesoderm-derived structure | 1.54e-18 | 315 |
presumptive mesoderm | 1.54e-18 | 315 |
bone marrow | 1.78e-18 | 76 |
immune system | 4.67e-18 | 93 |
skeletal element | 2.74e-16 | 90 |
bone element | 1.33e-15 | 82 |
skeletal system | 7.18e-15 | 100 |
circulatory system | 3.65e-12 | 112 |
cardiovascular system | 1.19e-11 | 109 |
epithelial tube | 3.22e-09 | 117 |
mesenchyme | 1.81e-08 | 160 |
entire embryonic mesenchyme | 1.81e-08 | 160 |
trunk mesenchyme | 7.69e-08 | 122 |
blood | 1.11e-07 | 15 |
haemolymphatic fluid | 1.11e-07 | 15 |
organism substance | 1.11e-07 | 15 |
trunk | 7.62e-07 | 199 |
muscle tissue | 9.86e-07 | 64 |
musculature | 9.86e-07 | 64 |
musculature of body | 9.86e-07 | 64 |
splanchnic layer of lateral plate mesoderm | 9.89e-07 | 83 |