FFCP PHASE1:Hg19::chr3:48542197..48542252,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30376 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000442747,ENST00000490864,ENST00000496408,uc003ctr.1,uc003cts.1_5end | |||
|cluster_id=chr3:48542197..48542252,- | |||
|description=CAGE_peak_4_at_SHISA5_5end | |||
|id=chr3:48542197..48542252,- | |||
|ontology_enrichment_celltype=CL:0000222!4.71e-16!119;CL:0000055!6.48e-13!180;CL:0000220!6.08e-12!246;CL:0002321!1.18e-11!248;CL:0002139!2.84e-11!24;CL:0000115!2.90e-11!35;CL:0000213!3.21e-10!57;CL:0000215!3.21e-10!57;CL:0002078!3.62e-10!44;CL:0000071!2.26e-08!18;CL:0002546!2.26e-08!18;CL:0000183!8.60e-08!59;CL:0000680!6.40e-07!57;CL:0000056!6.40e-07!57;CL:0000355!6.40e-07!57;CL:0000393!7.89e-07!60;CL:0000211!7.89e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.50e-12;24!CL:0000115;8.45e-10;36!CL:0000071;6.87e-09;18!CL:0002078;2.62e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.07e-15,121;CL:0002139,4.08e-12,24;CL:0000115,2.06e-11,36;CL:0002078,8.09e-10,45;CL:0002321,1.65e-09,250;CL:0000213,4.06e-09,58;CL:0000215,4.06e-09,58;CL:0000071,5.79e-09,18;CL:0002546,5.79e-09,18;CL:0000680,3.83e-07,58;CL:0000056,3.83e-07,58;CL:0000355,3.83e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;6.87e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.64e-20!110;UBERON:0001009!1.07e-19!113;UBERON:0000468!6.99e-19!659;UBERON:0002049!9.41e-18!79;UBERON:0007798!9.41e-18!79;UBERON:0000467!4.16e-17!625;UBERON:0000480!8.84e-17!626;UBERON:0000923!2.34e-15!604;UBERON:0005291!2.34e-15!604;UBERON:0006598!2.34e-15!604;UBERON:0002532!2.34e-15!604;UBERON:0002050!3.12e-15!605;UBERON:0005423!3.12e-15!605;UBERON:0000922!5.01e-15!612;UBERON:0000055!8.87e-14!69;UBERON:0000483!1.80e-12!309;UBERON:0000119!2.58e-12!312;UBERON:0000477!3.81e-12!286;UBERON:0001981!3.91e-12!60;UBERON:0007500!3.91e-12!60;UBERON:0004537!3.91e-12!60;UBERON:0006965!3.91e-12!60;UBERON:0004872!4.44e-12!84;UBERON:0004111!8.62e-11!241;UBERON:0000475!4.90e-10!365;UBERON:0003914!9.71e-10!118;UBERON:0001637!5.41e-09!42;UBERON:0003509!5.41e-09!42;UBERON:0004572!5.41e-09!42;UBERON:0000025!6.47e-09!194;UBERON:0000490!1.63e-08!138;UBERON:0000487!2.24e-08!22;UBERON:0001986!2.26e-08!18;UBERON:0004638!2.26e-08!18;UBERON:0004852!2.26e-08!18;UBERON:0006914!3.33e-08!25;UBERON:0000019!2.26e-07!19;UBERON:0000047!2.26e-07!19;UBERON:0004088!2.26e-07!19;UBERON:0003072!2.26e-07!19;UBERON:0003071!2.26e-07!19;UBERON:0004128!2.26e-07!19;UBERON:0003081!2.88e-07!216;UBERON:0000970!3.15e-07!20;UBERON:0000020!5.24e-07!23;UBERON:0003075!6.40e-07!86;UBERON:0007284!6.40e-07!86;UBERON:0001456!8.17e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002049;5.79e-09;75!UBERON:0007798;5.79e-09;75!UBERON:0004638;6.87e-09;18!UBERON:0001986;6.87e-09;18!UBERON:0004852;6.87e-09;18!UBERON:0000487;2.62e-08;22!UBERON:0000019;3.63e-08;19!UBERON:0000047;3.63e-08;19!UBERON:0004088;3.63e-08;19!UBERON:0010230;3.63e-08;19!UBERON:0006914;3.70e-08;25!UBERON:0000970;6.22e-08;20!UBERON:0000055;6.65e-08;65!UBERON:0000020;8.06e-08;23!UBERON:0001456;9.84e-08;21!UBERON:0001637;2.10e-07;42!UBERON:0003509;2.10e-07;42!UBERON:0004572;2.10e-07;42!UBERON:0007500;2.33e-07;56!UBERON:0001981;2.33e-07;56!UBERON:0004537;2.33e-07;56!UBERON:0002104;3.88e-07;21!UBERON:0001032;4.22e-07;24!UBERON:0004456;4.22e-07;24!UBERON:0001801;7.79e-07;14!UBERON:0007625;9.92e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.30e-21,109;UBERON:0001009,2.42e-20,112;UBERON:0002049,1.21e-18,78;UBERON:0007798,1.21e-18,78;UBERON:0000055,1.60e-14,68;UBERON:0007500,2.11e-12,59;UBERON:0001981,2.11e-12,59;UBERON:0004537,2.11e-12,59;UBERON:0006965,2.11e-12,59;UBERON:0004872,3.69e-12,83;UBERON:0000483,6.81e-11,306;UBERON:0000923,7.05e-11,560;UBERON:0010316,7.05e-11,560;UBERON:0005291,7.05e-11,560;UBERON:0006598,7.05e-11,560;UBERON:0010317,7.05e-11,560;UBERON:0002532,7.05e-11,560;UBERON:0000119,1.35e-10,309;UBERON:0000926,1.55e-10,315;UBERON:0004120,1.55e-10,315;UBERON:0006603,1.55e-10,315;UBERON:0002050,2.62e-10,564;UBERON:0005423,4.22e-10,581;UBERON:0000922,8.63e-10,592;UBERON:0004111,1.31e-09,240;UBERON:0001637,1.58e-09,42;UBERON:0003509,1.58e-09,42;UBERON:0004572,1.58e-09,42;UBERON:0003914,2.54e-09,117;UBERON:0004638,5.79e-09,18;UBERON:0001986,5.79e-09,18;UBERON:0004852,5.79e-09,18;UBERON:0000487,2.27e-08,22;UBERON:0000490,2.40e-08,148;UBERON:0006914,3.46e-08,25;UBERON:0003081,9.74e-08,203;UBERON:0000025,1.05e-07,192;UBERON:0000019,2.86e-07,20;UBERON:0000047,2.86e-07,20;UBERON:0010312,2.86e-07,20;UBERON:0004088,2.86e-07,20;UBERON:0010230,2.86e-07,20;UBERON:0003072,2.86e-07,20;UBERON:0004128,2.86e-07,20;UBERON:0003071,2.86e-07,20;UBERON:0000970,3.80e-07,21;UBERON:0002104,3.80e-07,21;UBERON:0007503,4.34e-07,78;UBERON:0000020,5.66e-07,24;UBERON:0001032,5.66e-07,24;UBERON:0004456,5.66e-07,24;UBERON:0001456,6.18e-07,22;UBERON:0003075,7.01e-07,82;UBERON:0007284,7.01e-07,82;UBERON:0001801,8.07e-07,14;UBERON:0007625,9.18e-07,11 | |||
|phase1_expression=2.54349730978779,1.2846031433459,1.12763523276777,2.00146596706261,1.78784437770915,0.872338524100369,2.53299878168311,3.79031924056099,1.30592814099919,0.491467873003018,0.697801167972428,0,0,10.8914390604841,3.64537113300707,0,1.20538905604795,1.46062018077475,1.95173119516203,6.1560529038394,4.08001382488506,10.9709152517331,11.4494394852423,9.30746090495612,4.89616294419731,0,0,0,1.18009283054671,0.767658796194425,3.2511385896376,0.919421224478927,1.204823675113,0.739508020333575,0.0774672005803016,0.142169232487422,0,3.32397245119126,2.80762226458198,4.34021741431704,1.34349284543955,0.647787332037959,0.515151135268373,1.89017710413434,1.51150377475524,2.42584061187816,1.85943229524548,0.411167888021826,1.54853185447552,4.02769349251011,2.30544635876191,3.07426898855161,0.689491361473237,0.645484683583826,0,1.69418105588344,1.09162460023138,1.34834090667051,0.612167784741805,0,1.91801137739712,4.61791820261403,3.39088217956774,8.52449501065388,1.45104619314292,0,0,4.52247597462138,1.5644487552606,6.08128765174327,2.42159801053347,0,2.84816148696796,0.845021145247767,1.27562579979026,0.838634582033504,7.86300418025466,7.0583139635508,2.57160938715328,0.285012743741249,0.39783335439818,1.0959849225878,0,0,0,0,0,0,0,1.90810750907073,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.301150238155546,0,2.49861453104692,0.473554504088034,0,0,0,0,2.43806866313962,3.35350429851818,2.68511379871414,2.89151321907653,3.00802746381534,7.24232594804119,2.3858578411533,5.83961844363163,15.1255707462509,11.3081992705908,8.0808002837676,1.30979075497713,3.64295288292542,2.59549109949101,0,0.348259474598534,0.664789802594326,0.238490624305342,0,0,3.7764857399674,2.58070378531837,5.55424802572151,9.04492707078415,8.80948816040802,8.52865930014209,7.9418087283988,4.90991842421725,4.62496141492723,4.35136796594071,3.22263453687318,5.32190474002959,4.63717909341522,3.67663080345869,6.48113558305408,3.12549048994279,2.91888184414021,2.13961812918312,4.5994991239765,6.6448596169769,6.59526278149466,3.9534125230819,7.75560528296651,3.05265836499774,2.48485975847659,3.16576279161449,0.794455084879313,1.43418310374407,2.12801029319014,2.80338800071154,1.06748995729705,3.94668077467456,2.8008993185979,1.34710672069688,0.980771418680752,1.51357427644931,2.88087962239999,1.87457145467037,1.24864030732128,1.71141546463335,2.09228152772521,0.23486899728753,0.323745888736263,0.280901613404497,2.44985005505872,1.47401180774122,3.30642499762449,4.75201142912821,3.21447008062124,0,7.18618141816238,1.0100166837244,1.37630371859161,0.831192346452549,0.877955241761676,2.14541457059314,4.8076178850111,3.51639767796065,1.25572744982203,2.56268866582281,1.69545520927649,1.20036438433761,2.98852334791473,0.257640540045629,3.16398655763703,0.506328996723799,2.24105111870757,1.26216887122057,2.76149695926898,2.90962902273861,3.19508633264953,2.01504196455281,2.88253006927829,0.773043412653187,0.818238361772504,0.286804595389004,0.365921118388786,0.662648841607426,0.929551542956147,1.34759371519982,0.756962552626885,0,6.25798129319264,1.92972281457866,4.14404764057442,2.3218396401599,5.77503585335668,0.236613600079688,0.674338760312407,0.482022059766964,0.330881918197182,0.217879444092406,0.474541238222193,0.134831308160164,0.392442930250692,0.38474715694639,3.69077727312324,7.01208869017229,2.4694440679884,4.41026134156626,0,8.84544495009863,0.590789906681404,0,0,4.97546649865724,0.98775256867763,0,1.20634766893957,4.0738915869753,6.19035780089617,3.11980435583874,2.88662684050547,9.15850199303107,4.57893907519705,10.2500177910362,8.33373922637899,5.89787871927255,0.790204397959275,4.29243081047436,0.738651018262192,0.468008530278475,0.594524649154913,0,1.00789276919316,0.425325291727159,0.447792613514241,0.871901815541886,1.53353071666084,0,0,0.207328115540772,0.288239906833923,0,0,0,1.17217447210047,1.71072446022705,0.308482478109971,0.600686115687835,0.285826432630578,1.00917975910825,0.87192013766656,1.0267360014933,1.42198887333556,10.7296933755565,0.845302752556,4.78688609852767,1.04007436911366,4.62973273671856,2.83698264046557,3.99633268524149,2.28764789853036,3.25572963234866,7.40916303102692,1.95441710576241,0.355391948742546,1.58390374586686,6.33022691825131,8.71533458600294,5.89840647974137,1.2162378064119,0,2.10833939483032,4.0736225433569,2.29723871668228,2.85273810081437,1.88215698667853,6.98619496671304,2.50685348535854,0,0,0,0,29.9831656582507,9.10978977003352,7.73288812777695,6.5331343480396,6.37938751653163,11.2351053592077,8.97484377612075,17.8198670777495,5.27573414392302,9.00306937907419,1.35632511849868,2.70362119990049,1.78428988797162,2.36553622550902,1.99140405487612,5.71797589482666,9.09630016223939,8.27784570340039,3.98535359121262,6.26855173041791,4.34418072340414,6.46143819627044,3.0882908142977,1.6541442089831,2.37285620900479,1.60091336705167,0.303127571446259,0,0.30239029332968,2.97729369382532,1.5346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| |||
|short_description=p4@SHISA5 | |||
}} |
Latest revision as of 14:23, 18 September 2015
Short description: | p4@SHISA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SHISA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000442747, ENST00000490864, ENST00000496408, uc003ctr.1, uc003cts.1_5end |
EntrezGene: | SHISA5 |
HGNC: | 30376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.07e-15 | 121 |
endothelial cell of vascular tree | 4.08e-12 | 24 |
endothelial cell | 2.06e-11 | 36 |
meso-epithelial cell | 8.09e-10 | 45 |
embryonic cell | 1.65e-09 | 250 |
lining cell | 4.06e-09 | 58 |
barrier cell | 4.06e-09 | 58 |
blood vessel endothelial cell | 5.79e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.79e-09 | 18 |
muscle precursor cell | 3.83e-07 | 58 |
myoblast | 3.83e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.83e-07 | 58 |