FFCP PHASE1:Hg19::chr3:49449521..49449532,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387 | |EntrezGene=387 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=667 | |HGNC=667 | ||
|TSSclassifier=strong | |||
|UniProt=C9J1T2,P61586,Q9BVT0 | |UniProt=C9J1T2,P61586,Q9BVT0 | ||
|association_with_transcript=0bp_to_ENST00000431929,NM_001664,uc003cwu.2_5end | |association_with_transcript=0bp_to_ENST00000431929,NM_001664,uc003cwu.2_5end | ||
|cluster_id=chr3:49449521..49449532,- | |||
|coexpression_cluster_id=C495 | |coexpression_cluster_id=C495 | ||
|description=CAGE_peak_2_at_RHOA_5end | |description=CAGE_peak_2_at_RHOA_5end | ||
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|ontology_enrichment_celltype=CL:0000048!8.61e-22!430;CL:0000723!1.77e-20!436;CL:0000034!5.68e-20!444;CL:0000055!1.39e-17!180;CL:0000222!2.57e-12!119;CL:0002057!5.55e-12!42;CL:0000134!1.11e-11!358;CL:0002320!5.26e-11!365;CL:0002371!6.44e-11!591;CL:0000057!1.16e-10!75;CL:0000359!1.27e-10!32;CL:0000192!2.13e-10!42;CL:0000514!2.13e-10!42;CL:0000860!3.29e-10!45;CL:0002009!1.21e-09!65;CL:0002194!1.32e-09!63;CL:0000576!1.32e-09!63;CL:0000040!1.32e-09!63;CL:0000559!1.32e-09!63;CL:0000680!2.04e-09!57;CL:0000056!2.04e-09!57;CL:0000355!2.04e-09!57;CL:0000219!3.31e-09!390;CL:0000766!3.95e-09!76;CL:0000183!8.41e-09!59;CL:0000144!1.53e-08!625;CL:0000187!1.87e-08!54;CL:0000393!2.08e-08!60;CL:0000211!2.08e-08!60;CL:0000839!5.16e-08!70;CL:0000557!5.26e-08!71;CL:0000136!3.20e-07!15 | |ontology_enrichment_celltype=CL:0000048!8.61e-22!430;CL:0000723!1.77e-20!436;CL:0000034!5.68e-20!444;CL:0000055!1.39e-17!180;CL:0000222!2.57e-12!119;CL:0002057!5.55e-12!42;CL:0000134!1.11e-11!358;CL:0002320!5.26e-11!365;CL:0002371!6.44e-11!591;CL:0000057!1.16e-10!75;CL:0000359!1.27e-10!32;CL:0000192!2.13e-10!42;CL:0000514!2.13e-10!42;CL:0000860!3.29e-10!45;CL:0002009!1.21e-09!65;CL:0002194!1.32e-09!63;CL:0000576!1.32e-09!63;CL:0000040!1.32e-09!63;CL:0000559!1.32e-09!63;CL:0000680!2.04e-09!57;CL:0000056!2.04e-09!57;CL:0000355!2.04e-09!57;CL:0000219!3.31e-09!390;CL:0000766!3.95e-09!76;CL:0000183!8.41e-09!59;CL:0000144!1.53e-08!625;CL:0000187!1.87e-08!54;CL:0000393!2.08e-08!60;CL:0000211!2.08e-08!60;CL:0000839!5.16e-08!70;CL:0000557!5.26e-08!71;CL:0000136!3.20e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.63e-10;32!CL:0000860;1.92e-09;33!CL:0002057;1.92e-09;33!CL:0000473;2.50e-08;39!CL:0000234;2.50e-08;39!CL:0000192;4.49e-08;43!CL:0000576;4.51e-08;48 | |ontology_enrichment_celltype_v019=CL:0000359;4.63e-10;32!CL:0000860;1.92e-09;33!CL:0002057;1.92e-09;33!CL:0000473;2.50e-08;39!CL:0000234;2.50e-08;39!CL:0000192;4.49e-08;43!CL:0000576;4.51e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.57e-22,427;CL:0000723,3.43e-21,433;CL:0000034,1.14e-20,441;CL:0000222,1.48e-12,121;CL:0000473,2.73e-12,48;CL:0000234,2.73e-12,48;CL:0000134,4.18e-12,354;CL:0000860,5.54e-12,42;CL:0002057,5.54e-12,42;CL:0002320,2.07e-11,361;CL:0002009,4.50e-11,61;CL:0002194,4.59e-11,59;CL:0000576,4.59e-11,59;CL:0000040,4.59e-11,59;CL:0000559,4.59e-11,59;CL:0000359,1.27e-10,32;CL:0000057,1.48e-10,76;CL:0000192,1.87e-10,43;CL:0000514,1.87e-10,43;CL:0000766,2.35e-10,72;CL:0000219,1.45e-09,386;CL:0000680,1.61e-09,58;CL:0000056,1.61e-09,58;CL:0000355,1.61e-09,58;CL:0000839,3.45e-09,66;CL:0000557,3.62e-09,67;CL:0000187,1.47e-08,55;CL:0000393,1.63e-08,61;CL:0000211,1.63e-08,61;CL:0000136,3.19e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;5.45e-09;42!CL:0000514;4.49e-08;43 | |ontology_enrichment_development_v019=CL:0002057;5.45e-09;42!CL:0000514;4.49e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.94e-25!216;UBERON:0004872!4.98e-18!84;UBERON:0002204!1.19e-16!167;UBERON:0001981!4.87e-16!60;UBERON:0007500!4.87e-16!60;UBERON:0004537!4.87e-16!60;UBERON:0006965!4.87e-16!60;UBERON:0000055!1.11e-15!69;UBERON:0000926!2.45e-15!448;UBERON:0004120!2.45e-15!448;UBERON:0006603!2.45e-15!448;UBERON:0002049!1.45e-14!79;UBERON:0007798!1.45e-14!79;UBERON:0001637!8.56e-14!42;UBERON:0003509!8.56e-14!42;UBERON:0004572!8.56e-14!42;UBERON:0001009!1.40e-13!113;UBERON:0004535!1.60e-12!110;UBERON:0002384!5.01e-11!375;UBERON:0003914!9.29e-11!118;UBERON:0004573!1.91e-10!33;UBERON:0004571!1.91e-10!33;UBERON:0001134!2.78e-10!61;UBERON:0002036!2.78e-10!61;UBERON:0003082!2.78e-10!61;UBERON:0000479!3.23e-10!787;UBERON:0002385!5.37e-10!63;UBERON:0001015!5.37e-10!63;UBERON:0000383!5.37e-10!63;UBERON:0004290!1.40e-09!70;UBERON:0000468!6.03e-09!659;UBERON:0000914!2.01e-08!83;UBERON:0002329!2.01e-08!83;UBERON:0003077!2.01e-08!83;UBERON:0003059!2.01e-08!83;UBERON:0007282!2.01e-08!83;UBERON:0009618!2.01e-08!83;UBERON:0007285!2.01e-08!83;UBERON:0002371!4.39e-08!80;UBERON:0001474!1.38e-07!86;UBERON:0002405!1.64e-07!115;UBERON:0000480!2.37e-07!626;UBERON:0000467!2.95e-07!625;UBERON:0000486!4.60e-07!82 | |ontology_enrichment_uberon=UBERON:0003081!8.94e-25!216;UBERON:0004872!4.98e-18!84;UBERON:0002204!1.19e-16!167;UBERON:0001981!4.87e-16!60;UBERON:0007500!4.87e-16!60;UBERON:0004537!4.87e-16!60;UBERON:0006965!4.87e-16!60;UBERON:0000055!1.11e-15!69;UBERON:0000926!2.45e-15!448;UBERON:0004120!2.45e-15!448;UBERON:0006603!2.45e-15!448;UBERON:0002049!1.45e-14!79;UBERON:0007798!1.45e-14!79;UBERON:0001637!8.56e-14!42;UBERON:0003509!8.56e-14!42;UBERON:0004572!8.56e-14!42;UBERON:0001009!1.40e-13!113;UBERON:0004535!1.60e-12!110;UBERON:0002384!5.01e-11!375;UBERON:0003914!9.29e-11!118;UBERON:0004573!1.91e-10!33;UBERON:0004571!1.91e-10!33;UBERON:0001134!2.78e-10!61;UBERON:0002036!2.78e-10!61;UBERON:0003082!2.78e-10!61;UBERON:0000479!3.23e-10!787;UBERON:0002385!5.37e-10!63;UBERON:0001015!5.37e-10!63;UBERON:0000383!5.37e-10!63;UBERON:0004290!1.40e-09!70;UBERON:0000468!6.03e-09!659;UBERON:0000914!2.01e-08!83;UBERON:0002329!2.01e-08!83;UBERON:0003077!2.01e-08!83;UBERON:0003059!2.01e-08!83;UBERON:0007282!2.01e-08!83;UBERON:0009618!2.01e-08!83;UBERON:0007285!2.01e-08!83;UBERON:0002371!4.39e-08!80;UBERON:0001474!1.38e-07!86;UBERON:0002405!1.64e-07!115;UBERON:0000480!2.37e-07!626;UBERON:0000467!2.95e-07!625;UBERON:0000486!4.60e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.26e-10;42!UBERON:0003509;4.26e-10;42!UBERON:0004572;4.26e-10;42!UBERON:0004573;2.67e-09;33!UBERON:0004571;2.67e-09;33!UBERON:0007500;4.54e-09;56!UBERON:0001981;4.54e-09;56!UBERON:0004537;4.54e-09;56!UBERON:0000055;2.68e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0001637;4.26e-10;42!UBERON:0003509;4.26e-10;42!UBERON:0004572;4.26e-10;42!UBERON:0004573;2.67e-09;33!UBERON:0004571;2.67e-09;33!UBERON:0007500;4.54e-09;56!UBERON:0001981;4.54e-09;56!UBERON:0004537;4.54e-09;56!UBERON:0000055;2.68e-07;65 | ||
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| ||
|short_description=p2@RHOA | |short_description=p2@RHOA | ||
}} | }} |
Latest revision as of 16:52, 18 September 2015
Short description: | p2@RHOA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RHOA_5end |
Coexpression cluster: | C495_mesothelioma_Preadipocyte_Smooth_Multipotent_Placental_Sertoli_Adipocyte |
Association with transcript: | 0bp_to_ENST00000431929, NM_001664, uc003cwu.2_5end |
EntrezGene: | RHOA |
HGNC: | 667 |
UniProt: | C9J1T2P61586Q9BVT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.57e-22 | 427 |
somatic stem cell | 3.43e-21 | 433 |
stem cell | 1.14e-20 | 441 |
mesodermal cell | 1.48e-12 | 121 |
defensive cell | 2.73e-12 | 48 |
phagocyte | 2.73e-12 | 48 |
mesenchymal cell | 4.18e-12 | 354 |
classical monocyte | 5.54e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.54e-12 | 42 |
connective tissue cell | 2.07e-11 | 361 |
macrophage dendritic cell progenitor | 4.50e-11 | 61 |
monopoietic cell | 4.59e-11 | 59 |
monocyte | 4.59e-11 | 59 |
monoblast | 4.59e-11 | 59 |
promonocyte | 4.59e-11 | 59 |
vascular associated smooth muscle cell | 1.27e-10 | 32 |
fibroblast | 1.48e-10 | 76 |
smooth muscle cell | 1.87e-10 | 43 |
smooth muscle myoblast | 1.87e-10 | 43 |
myeloid leukocyte | 2.35e-10 | 72 |
motile cell | 1.45e-09 | 386 |
muscle precursor cell | 1.61e-09 | 58 |
myoblast | 1.61e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.61e-09 | 58 |
myeloid lineage restricted progenitor cell | 3.45e-09 | 66 |
granulocyte monocyte progenitor cell | 3.62e-09 | 67 |
muscle cell | 1.47e-08 | 55 |
electrically responsive cell | 1.63e-08 | 61 |
electrically active cell | 1.63e-08 | 61 |
fat cell | 3.19e-07 | 15 |